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Properties
| Property Name | Value |
|---|
| Product | methylenetetrahydrofolate dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100064g3.4094.mrna |
| Orig protein id | gnl|cribi|Naga_100064g3.4094 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:272002..273776 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8561 ID=rna8561|Name=rna8561|organism=Nannochloropsis gaditana|type=mRNA|length=1281bp
ATGCGCTGGCCGCCCACGACCCTCTTACGTCGGGGGCTGGTTGCGGCATC
ATCAGGCAAACCCAAAAAGAAAACAATTGCTGATTTGGCCAAAGAGGTAT
CCCTCCAGGGCCAACGTGTCCTTGTCCGCGCCGATCTAAATGTCCCAGTC
AAAAATGGCACTGTGCAGGACCGGACTCGCATTGCCCTGTCGGCCCCGAC
CATTCGCTTCCTCCTCGACCAGGGGGCCAAAGTGATAGTCAGCAGCCATT
TGGGGCGGCCGAAAGGAGTGGTGGTGGAGGGCCAGCGCTTGACGCCCGTG
GCTTCCGTCTTGGAGGAGGTCGTGCGTGTCCCCGTGCGCCTAGCCCCTGA
CTCGGCGGGAGCGGCGACGGCGGCTTTCGTGCGGGAAGCGTCGGCTGGAG
AGGTGGTCCTCTTGGAGAACACCCGGTTCCATGCAGGTGAGACCAAGAAC
GACGATTTGTATGCCAAACAATTGCGAGAGGTGTCGGGAGCGGAGATCTA
CGTGAATGACGCCTTCGGTGCGGCCCATCGGGCGCATGCCTCCACGCATG
GCATCACCAAATTCGTGGCGCACAAGGTAGCGGGATTGCTGCTGGACAAG
GAGCTGACAGCGCTGGGCAGCATCATGGCCGCACCGGAGCATCCAGTCGT
GGCCTGTATTGGGGGCTCCAAGGTCTCGACGAAGCTCCCGGTGCTCGAGT
CCCTGCTGGCGACATGCGACACCATCTTGATCGGGGGAGGCATGATGTTC
ACATTCAACAAGGCCTTGGGCCGTGAAATTGGGCGGAGCCTGGTGGAGGA
GGACCTGGTGCCCATGGCCAAGGCATTCCTGGACAAGGCGGAGGCCAGAG
GGGTGAAGGTCGTGTTGCCACGAGACTTTGTGGTCGCGCCCGATGTGGCG
GAAGCGAACCAGAGCAGGGCCTTGCACGCGGACGTGGCCACGTATCAAGG
CGATGGGGTAGGGGTGGACATTGGTCCTTTGACGGTGGGGGACTTCCACA
ACGAGATCAAGGACGCCAAGACTTTCTTTTGGAACGGGCCCATGGGGGTG
ATCGAGGTTCCGCGCTACGCCCTGGGTACCGACGCCGTGACGCGGATGGC
GGCATTTTTGTCCCAGAAAGGAGGGCTGGCCGTGGTAGGTGGAGGAGACT
CCCTGGTGTCTGTGCAGAAACTGGGTCTTTTCGACAAAATCTCTCATGTG
TCGACGGGTGGGGGCGCTATGTTGGAATTTGTGGAAGGCAAACTCCTGCC
AGGTGTGGAGGTCCTGGACAATGCCAAGTAA back to topprotein sequence of rna8561 >rna8561-protein ID=rna8561-protein|Name=rna8561|organism=Nannochloropsis gaditana|type=polypeptide|length=354bp
MGSTEPTANCNGAAAPLGPAVKVDVTEIAKPYREEVRAAIHDRYGGVGPK
LVAFLANTDPYARQYAEWTGRACEADGIRYELRIINENELEQKLYEANED
ASVHGILIYYPVFGFFPSFYGGSMDDYLRDSVSFKKDVEGLSFTYRFNLY
RNIRFMDAATSAPARGPELKCLLPCTALSVVKILESIGGYDLSLPVGERM
TGKTVSIINRSEIVGRPLGALLANDGADIYSVDIDSIYHFRRGQLLQTSE
TPESAVRRSDVIVCGVPVKDYKLPTAWVKPGAIVVNVASYKNVEEEALLQ
VPGVKFVPLVGKVTIAMLERNLMRLFAQYHAEAAPGKDFRYYLENRPPAQ
EGPK back to topmRNA from alignment at KK037249.1:272002..273776+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8561 ID=rna8561|Name=rna8561|organism=Nannochloropsis gaditana|type=mRNA|length=1775bp|location=Sequence derived from alignment at KK037249.1:272002..273776+ (Nannochloropsis gaditana)
ATATTTTCTGGGCGTTGCCCACGGAGCTTGATCTAAAAGTGTTGTACGCT
GTGCAACTCTTTTCGAATCTTGTCGCGGTCTAAGTCGACGATGAAAAAAA
CCCCGCGTGCCTCCGAAAAGGGTCCAAATTAAAATACCCTGTGAACCCGT
TTTCACTCAACAGGTTTTGGCATTTGGAATAAGACGGCCTTATTCTTGTT
GAcgctgctttcctcctgtgCTTTTTGATCCCTCGTCATGGGTTCGACAG
AGCCCACTGCAAACTGTAACGGGGCCGCTGCTCCTTTAGGGCCCGCTGTG
AAAGTCGACGTAACAGAAATCGCGAAACCttacagggaggaggttcgtGC
AGCCATCCACGACAGATACGGGGGTGTTGGCCCGAAGCTGGTGGCTTTCT
TGGCAAATACCGTACGTTCGATGGGGGGATAACGAGGCTCTGAAAAGGGC
GTGGGGGCCGACGGAGCTCCCGATTGTCTCTCTTTCGGCGTTCCATTCAG
TTACTCAATATGAATCGTGTGTCTAACAGTGTGTGTAGTCCTGGCAGACC
ATTTTTAAAATCCCCGCTCTTGCTTGGTCCCATTttgaccctcccttcct
ccggggCCTCGGATTTCCACAGGACCCTTACGCCCGACAATACGCCGAGT
GGACGGGCAGGGCCTGCGAGGCGGACGGCATACGATACGAGCTCCGCATC
ATCAACGAGAACGAGCTGGAACAGAAACTGTACGAAGCAAACGAGGACGC
AAGCGTGCACGGCATCCTCATCTACTACCCGGTTTttggcttcttcccct
cgttcTACGGGGGCTCCATGGATGACTACCTACGCGACTCCGTTTCCTTC
AAGAAAGACGTGGAAGGTCTGTCCTTCACATACCGATTCAATCTCTACCG
GAATATACGCTTCATGGacgccgccacctccgcccctgcccgcGGCCCTG
AACTGAAATGCCTGCTCCCATGCACCGCCCTCAGCGTGGTGAAGATCCTG
GAAAGCATCGGTGGGTACGACCTGAGCCTTCCGGTCGGTGAGAGGATGAC
GGGTAAGACAGTCAGCATCATCAACCGGAGCGAGATCGTGGGCCGGCCGC
TGGGCGCCCTCTTAGCCAACGACGGCGCCGACATCTACAGCGTTGACATC
GACTCCATCTACCACTTCCGCCGGGGGCAGCTCCTGCAAACGTCCGAGAC
CCCCGAAAGCGCGGTGCGTCGGTCGGACGTGATCGTCTGCGGTGTTCCAG
TCAAGGACTACAAGCTCCCGACGGCCTGGGTGAAGCCGGGGGCCATCGTG
GTCAACGTGGCGAGCTACAagaatgtggaggaggaggctctgtTGCAGGT
CCCGGGCGTCAAATTCGTGCCCTTGGTGGGGAAAGTGACGATTGCCATGT
TGGAGCGGAATTTGATGCGGCTGTTCGCGCAATATCACGCCGAGGCCGCG
CCGGGAAAGGACTTTCGGTACTACTTGGAAAACCGACCACCCGCTCAGGA
GGGACCaaagtagggaaggagggagggggaggggaagggagggagggtgg
gtcTTTGCGAAGCCCCGCACAATTTTGAAGACATGGGATCAGGCACTCTG
GACACTGAGCATGAGGTCAGCTATTTTCGCGAGTCGCGTACCGAAACCGT
TGAGGGGCATGAGAAAAACGACGCCGGCGTTTCAAAGCAATAAAAAAGTG
CAGTGGACTCAAGGAAGAGGGTCAAGCGGTAGTGATGCAGCACGCTTTCG
CGTTGCGATTTGGATTTCTGGCTGC back to topCoding sequence (CDS) from alignment at KK037249.1:272002..273776+ >rna8561 ID=rna8561|Name=rna8561|organism=Nannochloropsis gaditana|type=CDS|length=2130bp|location=Sequence derived from alignment at KK037249.1:272002..273776+ (Nannochloropsis gaditana)
ATGGGTTCGACAGAGCCCACTGCAAACTGTAACGGGGCCGCTGCTCCTTT
AGGGCCCGCTGTGAAAGTCGACGTAACAGAAATCGCGAAACCttacaggg
aggaggttcgtGCAGCCATCCACGACAGATACGGGGGTGTTGGCCCGAAG
CTGGTGGCTTTCTTGGCAAATACCGACCCTTACGCCCGACAATACGCCGA
GTGGACGGGCAGGGCCTGCGAGGCGGACGGCATACGATACGAGCTCCGCA
TCATCAACGAGAACGAGCTGGAACAGAAACTGTACGAAGCAAACGAGGAC
GCAAGCGTGCACGGCATCCTCATCTACTACCCGGTTTttggcttcttccc
ctcgttcTACGGGGGCTCCATGGATGACTACCTACGCGACTCCGTTTCCT
TCAAGAAAGACGTGGAAGGTCTGTCCTTCACATACCGATTCAATCTCTAC
CGGAATATACGCTTCATGGacgccgccacctccgcccctgcccgcGGCCC
TGAACTGAAATGCCTGCTCCCATGCACCGCCCTCAGCGTGGTGAAGATCC
TGGAAAGCATCGGTGGGTACGACCTGAGCCTTCCGGTCGGTGAGAGGATG
ACGGGTAAGACAGTCAGCATCATCAACCGGAGCGAGATCGTGGGCCGGCC
GCTGGGCGCCCTCTTAGCCAACGACGGCGCCGACATCTACAGCGTTGACA
TCGACTCCATCTACCACTTCCGCCGGGGGCAGCTCCTGCAAACGTCCGAG
ACCCCCGAAAGCGCGGTGCGTCGGTCGGACGTGATCGTCTGCGGTGTTCC
AGTCAAGGACTACAAGCTCCCGACGGCCTGGGTGAAGCCGGGGGCCATCG
TGGTCAACGTGGCGAGCTACAagaatgtggaggaggaggctctgtTGCAG
GTCCCGGGCGTCAAATTCGTGCCCTTGGTGGGGAAAGTGACGATTGCCAT
GTTGGAGCGGAATTTGATGCGGCTGTTCGCGCAATATCACGCCGAGGCCG
CGCCGGGAAAGGACTTTCGGTACTACTTGGAAAACCGACCACCCGCTCAG
GAGGGACCaaagtagATGGGTTCGACAGAGCCCACTGCAAACTGTAACGG
GGCCGCTGCTCCTTTAGGGCCCGCTGTGAAAGTCGACGTAACAGAAATCG
CGAAACCttacagggaggaggttcgtGCAGCCATCCACGACAGATACGGG
GGTGTTGGCCCGAAGCTGGTGGCTTTCTTGGCAAATACCGACCCTTACGC
CCGACAATACGCCGAGTGGACGGGCAGGGCCTGCGAGGCGGACGGCATAC
GATACGAGCTCCGCATCATCAACGAGAACGAGCTGGAACAGAAACTGTAC
GAAGCAAACGAGGACGCAAGCGTGCACGGCATCCTCATCTACTACCCGGT
TTttggcttcttcccctcgttcTACGGGGGCTCCATGGATGACTACCTAC
GCGACTCCGTTTCCTTCAAGAAAGACGTGGAAGGTCTGTCCTTCACATAC
CGATTCAATCTCTACCGGAATATACGCTTCATGGacgccgccacctccgc
ccctgcccgcGGCCCTGAACTGAAATGCCTGCTCCCATGCACCGCCCTCA
GCGTGGTGAAGATCCTGGAAAGCATCGGTGGGTACGACCTGAGCCTTCCG
GTCGGTGAGAGGATGACGGGTAAGACAGTCAGCATCATCAACCGGAGCGA
GATCGTGGGCCGGCCGCTGGGCGCCCTCTTAGCCAACGACGGCGCCGACA
TCTACAGCGTTGACATCGACTCCATCTACCACTTCCGCCGGGGGCAGCTC
CTGCAAACGTCCGAGACCCCCGAAAGCGCGGTGCGTCGGTCGGACGTGAT
CGTCTGCGGTGTTCCAGTCAAGGACTACAAGCTCCCGACGGCCTGGGTGA
AGCCGGGGGCCATCGTGGTCAACGTGGCGAGCTACAagaatgtggaggag
gaggctctgtTGCAGGTCCCGGGCGTCAAATTCGTGCCCTTGGTGGGGAA
AGTGACGATTGCCATGTTGGAGCGGAATTTGATGCGGCTGTTCGCGCAAT
ATCACGCCGAGGCCGCGCCGGGAAAGGACTTTCGGTACTACTTGGAAAAC
CGACCACCCGCTCAGGAGGGACCaaagtag back to top
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