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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100064g14.4119.mrna |
| Orig protein id | gnl|cribi|Naga_100064g14.4119 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:243996..246068 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8552 ID=rna8552|Name=rna8552|organism=Nannochloropsis gaditana|type=mRNA|length=2533bp
ACTGTTCTGTTCCACTGAACGCCATCATCCCGAAGCTGGAGCGTCCTCTC
CAAGAGGAAGCACATCCTTGGCGGTGTGAAGAGGCGTGAATGGCAGTTTT
ACTTTGTGGAATGGACCTCATTGACGTCTTGAAAATTGTGGGATGGTCTC
TAATGACCTCACAGCAGCATCTAACGGGTCACGACAGCGCACGTTCAAGT
AAAAAAGGAGAACTTGCATGACTCTCAATAAATAAATGTGCGCGGGTTTG
ATCCATTCCAATGTCACAAACATGCACAGATTTACAGGAAGATCTCCTTT
ATTTGGCCATGAACGTCACGTTGGACCGGTTTCCTGATTGATGAGGTTCC
TGCCTTGTCCCAGCCCCTTGGCAAGTGTTTCTTGGCTTTCACGGTGCTAT
CCTCATACTATCCAGCCCGCTTTGATTGGCAATAGCATCGACAGTAAAAG
ATGGACATGGAATCTCAAGGTTTTACAATGGAAGTCATCCCAGCGAACTA
TATTTCAATACCTGTGGCCGCCTAAATCCGGCCCATCACTTTCTCATCCA
GCAGGAAAGACAGATAGCGGCTCCCAAAATGATGTGGGTGGGGACAATGG
ACAGGACATTTCTAAATCACAAAATCTGTATTCGCATAAAGACCTGTACA
ACAAGGACACATTGTGGGGCGCGAAGACAGGCGTCGGGAGTCGAATGCCT
TTCCCTCCCAAGGCGGAAGACTCCCTGCTTGAACGTTTGGAAAAAGCGCA
CATGTGCACCGAGCGGCTCCTACAACGGAAGTCCCAACTGCTTCATACAA
AATCCACCGTGACATTCCCTTCTTCCAGCTCCCGGGAGGCGCCTTCGAAG
CGACTCGGCTCTTGCCCCGTGCTTGAGGACCTACTGGATGAACACTGGAC
ATTCCGCCTCGAACGACGGCCTTCCACTCTACCGGGAGCGGGCATGGGCC
TGTTCCTAGTCCAGGGGCGGGTGCACGCGGGGGAAGTTATCACCTGCCAC
CCTGGGCTTGTCTACCGGATCCCGTACGACCTGGAGGCGTGCATGCCCAT
GGATGAAGTCAGTTTCTCGCCCTGTCCCCCGCCGTTCCTGGTGAAGAACG
ATTACCTCCTCCGCTTCTACCACCCTGTCACCAACCAACATTTGCTCCTG
GACGGTTGTCCTCAGGGCATCTCGGCGTTGAATTTTATCGCCGCCAATCA
ACGTCGGGGCCGTCCGTGGGCGAACATGGAGTGGCTGGAAAGTAGCCCAT
TCGGCTGCCGGCGCCGCGGGCCTGAACGCGAAGAGGGTCTCGTGGAGGGA
GGATGGGGGGAGGGAAGGAAAGACAGGGGGAGGCCTGGGGGACCGATGCA
GGGAACGTCATGCCTGGGCGAAGGAGGGGAGGAGGTGTTGCTCCCTAGGG
AAATGGACTCGAGCAAATACTTCACGGCCAAATTGGGGTTGGGTCATCTA
GTCAATGACCCCCATTCCCCCGAGAAATACAACGCAGAATTCCATCTCTG
CGAGCTTCCGTCAGACCTGCCACCCCACCTGCTTCGCTTTATTCCCAACC
TGCATTTCGCCCAAGGCATTGGAAGTCGGCACTTTTGTGTCCTGGTGACG
GCGTCGAAAAATCTGGAGGTGCCCCAAGGTGCCCCCCCCGTCGAAATTTA
TGTTCCCTATGCAAGTTCATTCACGGAGGTCTGCAAGCATGGATTTCCAT
TGCTTTGAATTTACACATGCGTGGGCGTGAGAAAGAAAGACATGTATGCC
TGGAGAGCTATGGGGGTCAAAGGAATGCGGGTCGTCTGGTGGTCAAACAT
CGGCCGTGGTACTTTTCCCTGGGCGGCAGGAATTTGTCCTATGGCTGGCT
GCAGATGATGACATTGCTTATCATGTACGGGAAATTGAAGGCATTTCCTG
CCGTAGAGATAATTTCGTTCACGGAACTCAGGCCTTGGGCAGGTCCAGCG
TGAGTGAAAATGAGGAGAAATTTGTTGCACGGACTAGGGATCTGCGACAC
GACACATCGCCGCGTGATTTGATATGGAAAAGTGAACAGCCAATGGATGG
AACGAAGGCTTTCCTACTGCAACACTGAGCATATGCGTTTCTTTCGTGGC
ATCTGAGCTGCCATTCATGTCTGTAGCCTTCGCCTTTTCCTACTCGAGAC
GGAAGTCTGCTCATACTCATAAGCTTATAATTGTGTGTTGGACGCCTCAT
TATATACAGAAACCGCACAAAAATGCAAAGCACACGACCTGCGCAATCTC
AAGCATGAACCTTCTTTCCTCGCACATTTAGTTTCTTGTGTTCGACATGT
GGTCCCCTCGGCCAGTTACCCGCAGTCAACGCCTTCGCACCCCACCCTGG
TAAGGAACCTGGATCCCGAAACATTCTCCGCCCCGGGCAAGGGGGAGGAC
GTGGCGGAGGAAGGAGAAGAGAAGGAGAAGAACTTGATCGCCGCATCCAA
TGAAAAAAGGGAGGAGGATGCAACTGAGGCTGGGGCCCCGGATTTGCCAA
TGGCTTCCGCTTCGTGAGCAACAGAGATACGGG back to topprotein sequence of rna8552 >rna8552-protein ID=rna8552-protein|Name=rna8552|organism=Nannochloropsis gaditana|type=polypeptide|length=668bp
MDHREEEMKALRNEAISLRRSGADAAAAYERSKKRCDELMESLVELQARY
DAAVEASVAATTSQTANEPIFGSMSQSKGSSFDVYARMVELERALAAKDD
ILRGMQAANVKEATETCVSVNEEMVDEGQAIDPEEFQDAVRPVDEALEGA
AMRDVQPSSFGAQKADLKTTGTDDPSIDYTPPGAEESVIERGTQIGGGLS
ICTPEKQVLKGTIQSLLYDLTFLKDFAGAELKISNEAFQAIQEEGAQKEK
MHADEVRSLKAELAQTQATLASLRAEAQEQASRDNLTIQELEVTVQLTEG
ALRVAKQQEEAAVAAAAAATAECVVSLPKGATSPAATSKLLGLVESLRYQ
LQKTQQRADEAEDRQGHLVQEMSELEDRLARAEQQLATTAAGALRGGMEG
PLSAPEDLDPASLESKGRHHSSDDRSRAMDSSETEAAAPCAPPAPSPLSS
SSTATAKYPPALRRVQAELLQTKAQLDTAKTNTSLLQRYIVSRRLQTWDG
VQKLLESTESQGTSHACVTASPQMASGRFEGHKGVTPVLPAAGASRPSPP
PLLLPGKSEAKSFPSPPAGVPARISVAHEAEAIGKSGAPASVASSSLFSL
DAAIKFFSFSSPSSATSSPLPGAENGTTCRTQETKCARKEGSCLRLRRSC
ALHFCAVSVYNEASNTQL back to topmRNA from alignment at KK037249.1:243996..246068- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8552 ID=rna8552|Name=rna8552|organism=Nannochloropsis gaditana|type=mRNA|length=2073bp|location=Sequence derived from alignment at KK037249.1:243996..246068- (Nannochloropsis gaditana)
ATGGATCATCGTGAAGAAGAAATGAAAGCACTTCGTAACGAGGCTATATC
TCTGCGTCGTTCGGGTGCTGATGCTGCCGCAGCGTATGAACGATCCAAAA
AACGTTGCGATGAATTAATGGAATCGCTTGTTGAGCTCCAAGCACGCTAC
GACGCTGCCGTGGAGGCTAGTGTGGCTGCTACTACTTCACAGACGGCCAA
TGAACCGATTTTCGGGTCAATGTCTCAATCGAAAGGCTCATCATTTGACG
TGTATGCACGAATGGTCGAGCTAGAGCGTGCTCTAGCCGCCAAAGATGAC
ATCCTGCGGGGTATGCAAGCCGCAAATGTGAAGGAAGCAACGGAGACATG
TGTAAGTGTTAACGAGGAAATGGTGGATGAAGGGCAGGCCATTGATCCTG
AGGAATTTCAGGATGCCGTTCGCCCCGTCGATGAAGCTTTGGAAGGAGCA
GCGATGAGAGATGTCCAGCCCTCCTCCTTTGGGGCTCAAAAAGCTGATTT
AAAGACCACGGGCACAGATGACCCGTCAATCGACTACACTCCTCCTGGCG
CTGAAGAAAGTGTGATCGAACGGGGGACGCAAATTGGGGGCGGTCTTTCC
ATTTGCACCCCGGAAAAGCAGGTTCTCAAGGGTACTATCCAATCTTTGTT
GTACGATTTAACCTTTCTTAAGGACTTCGCTGGAGCGGAGTTGAAAATCA
GCAACGAAGCCTTTCAAGCCATTCAGGAAGAAGGTGCACAAAAAGAAAAG
ATGCACGCGGATGAAGTTAGGAGCTTGAAGGCAGAATTAGCACAGACCCA
GGCTACGCTGGCATCCCTGCGGGCAGAGGCTCAGGAGCAAGCTTCACGCG
ACAACTTGACCATCCAGGAGCTAGAGGTGACGGTGCAGCTCACGGAAGGA
GCCCTCAGGGTTGCGAAGCAGCAGGAAGAAGCAGCGGTGGCCGCAGCTGC
CGCAGCAACTGCCGAATGCGTTGTCTCCTTACCGAAGGGAGCGACCAGCC
CGGCCGCCACCAGTAAGCTACTCGGGCTCGTGGAAAGTTTGCGGTATCAA
CTCCAAAAAACCCAACAGCGGGCGGACGAAGCCGAAGATCGGCAAGGACA
TTTGGTCCAGGAAATGTCGGAATTGGAAGATCGATTGGCCCGGGCAGAGC
AACAGCTCGCTACGACAGCAGCAGGGGCTTTGCGAGGTGGGATGGAGGGA
CCTCTCTCAGCCCCGGAAGACTTGGATCCAGCCAGTCTCGAGAGTAAGGG
TAGACATCATTCTTCCGATGACCGAAGTAGAGCCATGGATAGCTCTGAGA
CCGAGGCTGCCGCGCCCTGTGCTCCCCCTGCGCCTTCCCCCCTCTCCTCG
TCCTCCACGGCTACTGCCAAATATCCTCCCGCCTTGCGACGCGTTCAAGC
CGAGCTTTTGCAAACAAAGGCACAACTGGACACTGCGAAGACCAACACTT
CCCTTTTGCAAAGGTACATTGTCAGCAGGAGGTTGCAGACGTGGGACGGA
GTACAAAAGCTTCTTGAGTCGACGGAATCACAGGGCACGAGTCATGCTTG
CGTGACAGCATCCCCCCAGATGGCGTCAGGGAGGTTCGAGGGACACAAAG
GTGTAACCCCAGTCCTACCTGCGGCTGGTGCATCGCGACCATCGCCTCCT
CCTCTCTTGTTGCCGGGAAAATCGGAAGCAAAGTCCTTTCCTTCCCCCCC
GGCTGGCGTGCCCGCCCGTATCTCTGTTGCTCACGAAGCGGAAGCCATTG
GCAAATCCGGGGCCCCAGCCTCAGTTGCATCCTCCTCCCTTTTTTCATTG
GATGCGGCGATCAAGTTCTTCTCCTTCTCTTCTCCTTCCTCCGCCACGTC
CTCCCCCTTGCCCGGGGCGGAGAATGTTTCGGGATCCAGGTTCCTTACCA
GGGTGGGGTGCGAAGGCGTTGACTGCGGGTAACTGGCCGAGGGGACCACA
TGTCGAACACAAGAAACTAAATGTGCGAGGAAAGAAGGTTCATGCTTGAG
ATTGCGCAGGTCGTGTGCTTTGCATTTTTGTGCGGTTTCTGTATATAATG
AGGCGTCCAACACACAATTATAA back to topCoding sequence (CDS) from alignment at KK037249.1:243996..246068- >rna8552 ID=rna8552|Name=rna8552|organism=Nannochloropsis gaditana|type=CDS|length=4014bp|location=Sequence derived from alignment at KK037249.1:243996..246068- (Nannochloropsis gaditana)
GGGACCACATGTCGAACACAAGAAACTAAATGTGCGAGGAAAGAAGGTTC
ATGCTTGAGATTGCGCAGGTCGTGTGCTTTGCATTTTTGTGCGGTTTCTG
TATATAATGAGGCGTCCAACACACAATTATAAATGGATCATCGTGAAGAA
GAAATGAAAGCACTTCGTAACGAGGCTATATCTCTGCGTCGTTCGGGTGC
TGATGCTGCCGCAGCGTATGAACGATCCAAAAAACGTTGCGATGAATTAA
TGGAATCGCTTGTTGAGCTCCAAGCACGCTACGACGCTGCCGTGGAGGCT
AGTGTGGCTGCTACTACTTCACAGACGGCCAATGAACCGATTTTCGGGTC
AATGTCTCAATCGAAAGGCTCATCATTTGACGTGTATGCACGAATGGTCG
AGCTAGAGCGTGCTCTAGCCGCCAAAGATGACATCCTGCGGGGTATGCAA
GCCGCAAATGTGAAGGAAGCAACGGAGACATGTGTAAGTGTTAACGAGGA
AATGGTGGATGAAGGGCAGGCCATTGATCCTGAGGAATTTCAGGATGCCG
TTCGCCCCGTCGATGAAGCTTTGGAAGGAGCAGCGATGAGAGATGTCCAG
CCCTCCTCCTTTGGGGCTCAAAAAGCTGATTTAAAGACCACGGGCACAGA
TGACCCGTCAATCGACTACACTCCTCCTGGCGCTGAAGAAAGTGTGATCG
AACGGGGGACGCAAATTGGGGGCGGTCTTTCCATTTGCACCCCGGAAAAG
CAGGTTCTCAAGGGTACTATCCAATCTTTGTTGTACGATTTAACCTTTCT
TAAGGACTTCGCTGGAGCGGAGTTGAAAATCAGCAACGAAGCCTTTCAAG
CCATTCAGGAAGAAGGTGCACAAAAAGAAAAGATGCACGCGGATGAAGTT
AGGAGCTTGAAGGCAGAATTAGCACAGACCCAGGCTACGCTGGCATCCCT
GCGGGCAGAGGCTCAGGAGCAAGCTTCACGCGACAACTTGACCATCCAGG
AGCTAGAGGTGACGGTGCAGCTCACGGAAGGAGCCCTCAGGGTTGCGAAG
CAGCAGGAAGAAGCAGCGGTGGCCGCAGCTGCCGCAGCAACTGCCGAATG
CGTTGTCTCCTTACCGAAGGGAGCGACCAGCCCGGCCGCCACCAGTAAGC
TACTCGGGCTCGTGGAAAGTTTGCGGTATCAACTCCAAAAAACCCAACAG
CGGGCGGACGAAGCCGAAGATCGGCAAGGACATTTGGTCCAGGAAATGTC
GGAATTGGAAGATCGATTGGCCCGGGCAGAGCAACAGCTCGCTACGACAG
CAGCAGGGGCTTTGCGAGGTGGGATGGAGGGACCTCTCTCAGCCCCGGAA
GACTTGGATCCAGCCAGTCTCGAGAGTAAGGGTAGACATCATTCTTCCGA
TGACCGAAGTAGAGCCATGGATAGCTCTGAGACCGAGGCTGCCGCGCCCT
GTGCTCCCCCTGCGCCTTCCCCCCTCTCCTCGTCCTCCACGGCTACTGCC
AAATATCCTCCCGCCTTGCGACGCGTTCAAGCCGAGCTTTTGCAAACAAA
GGCACAACTGGACACTGCGAAGACCAACACTTCCCTTTTGCAAAGGTACA
TTGTCAGCAGGAGGTTGCAGACGTGGGACGGAGTACAAAAGCTTCTTGAG
TCGACGGAATCACAGGGCACGAGTCATGCTTGCGTGACAGCATCCCCCCA
GATGGCGTCAGGGAGGTTCGAGGGACACAAAGGTGTAACCCCAGTCCTAC
CTGCGGCTGGTGCATCGCGACCATCGCCTCCTCCTCTCTTGTTGCCGGGA
AAATCGGAAGCAAAGTCCTTTCCTTCCCCCCCGGCTGGCGTGCCCGCCCG
TATCTCTGTTGCTCACGAAGCGGAAGCCATTGGCAAATCCGGGGCCCCAG
CCTCAGTTGCATCCTCCTCCCTTTTTTCATTGGATGCGGCGATCAAGTTC
TTCTCCTTCTCTTCTCCTTCCTCCGCCACGTCCTCCCCCTTGCCCGGGGC
GGAGAATGGGACCACATGTCGAACACAAGAAACTAAATGTGCGAGGAAAG
AAGGTTCATGCTTGAGATTGCGCAGGTCGTGTGCTTTGCATTTTTGTGCG
GTTTCTGTATATAATGAGGCGTCCAACACACAATTATAAATGGATCATCG
TGAAGAAGAAATGAAAGCACTTCGTAACGAGGCTATATCTCTGCGTCGTT
CGGGTGCTGATGCTGCCGCAGCGTATGAACGATCCAAAAAACGTTGCGAT
GAATTAATGGAATCGCTTGTTGAGCTCCAAGCACGCTACGACGCTGCCGT
GGAGGCTAGTGTGGCTGCTACTACTTCACAGACGGCCAATGAACCGATTT
TCGGGTCAATGTCTCAATCGAAAGGCTCATCATTTGACGTGTATGCACGA
ATGGTCGAGCTAGAGCGTGCTCTAGCCGCCAAAGATGACATCCTGCGGGG
TATGCAAGCCGCAAATGTGAAGGAAGCAACGGAGACATGTGTAAGTGTTA
ACGAGGAAATGGTGGATGAAGGGCAGGCCATTGATCCTGAGGAATTTCAG
GATGCCGTTCGCCCCGTCGATGAAGCTTTGGAAGGAGCAGCGATGAGAGA
TGTCCAGCCCTCCTCCTTTGGGGCTCAAAAAGCTGATTTAAAGACCACGG
GCACAGATGACCCGTCAATCGACTACACTCCTCCTGGCGCTGAAGAAAGT
GTGATCGAACGGGGGACGCAAATTGGGGGCGGTCTTTCCATTTGCACCCC
GGAAAAGCAGGTTCTCAAGGGTACTATCCAATCTTTGTTGTACGATTTAA
CCTTTCTTAAGGACTTCGCTGGAGCGGAGTTGAAAATCAGCAACGAAGCC
TTTCAAGCCATTCAGGAAGAAGGTGCACAAAAAGAAAAGATGCACGCGGA
TGAAGTTAGGAGCTTGAAGGCAGAATTAGCACAGACCCAGGCTACGCTGG
CATCCCTGCGGGCAGAGGCTCAGGAGCAAGCTTCACGCGACAACTTGACC
ATCCAGGAGCTAGAGGTGACGGTGCAGCTCACGGAAGGAGCCCTCAGGGT
TGCGAAGCAGCAGGAAGAAGCAGCGGTGGCCGCAGCTGCCGCAGCAACTG
CCGAATGCGTTGTCTCCTTACCGAAGGGAGCGACCAGCCCGGCCGCCACC
AGTAAGCTACTCGGGCTCGTGGAAAGTTTGCGGTATCAACTCCAAAAAAC
CCAACAGCGGGCGGACGAAGCCGAAGATCGGCAAGGACATTTGGTCCAGG
AAATGTCGGAATTGGAAGATCGATTGGCCCGGGCAGAGCAACAGCTCGCT
ACGACAGCAGCAGGGGCTTTGCGAGGTGGGATGGAGGGACCTCTCTCAGC
CCCGGAAGACTTGGATCCAGCCAGTCTCGAGAGTAAGGGTAGACATCATT
CTTCCGATGACCGAAGTAGAGCCATGGATAGCTCTGAGACCGAGGCTGCC
GCGCCCTGTGCTCCCCCTGCGCCTTCCCCCCTCTCCTCGTCCTCCACGGC
TACTGCCAAATATCCTCCCGCCTTGCGACGCGTTCAAGCCGAGCTTTTGC
AAACAAAGGCACAACTGGACACTGCGAAGACCAACACTTCCCTTTTGCAA
AGGTACATTGTCAGCAGGAGGTTGCAGACGTGGGACGGAGTACAAAAGCT
TCTTGAGTCGACGGAATCACAGGGCACGAGTCATGCTTGCGTGACAGCAT
CCCCCCAGATGGCGTCAGGGAGGTTCGAGGGACACAAAGGTGTAACCCCA
GTCCTACCTGCGGCTGGTGCATCGCGACCATCGCCTCCTCCTCTCTTGTT
GCCGGGAAAATCGGAAGCAAAGTCCTTTCCTTCCCCCCCGGCTGGCGTGC
CCGCCCGTATCTCTGTTGCTCACGAAGCGGAAGCCATTGGCAAATCCGGG
GCCCCAGCCTCAGTTGCATCCTCCTCCCTTTTTTCATTGGATGCGGCGAT
CAAGTTCTTCTCCTTCTCTTCTCCTTCCTCCGCCACGTCCTCCCCCTTGC
CCGGGGCGGAGAAT back to top
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