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Properties
| Property Name | Value |
|---|
| Product | protein phosphatase 2c containing protein |
| Orig transcript id | gnl|cribi|Naga_100017g46.320.mrna |
| Orig protein id | gnl|cribi|Naga_100017g46.320 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:579017..581673 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna855 ID=rna855|Name=rna855|organism=Nannochloropsis gaditana|type=mRNA|length=3676bp
ACGTGCATTAGGCGACTAAGTCCGCGGGCGCCTCGTCGTCACCGTGTTGT
TTTGTCGTCCACCCGCGGGTCCTAGCTACAGAGTCGCCTCCAACCTCCTG
GCTGGTCAGCACAACTTCACTTAAAAAATGGTAGCTCTTCCAAGACATAA
GCACACGCGGACACTGCAGCACAGTCGCCTTTTCGCTCCATATCGGGCTA
TTGGATGCATCACGGATGGGGCACCTTTCGGCATTAATAGACTAGGGGGT
GTAACTTTCATCACCACAACGGTCGGGAAGGCATTTCAAGTCTTCGAAGC
CGATAAGCTCCGAGTCGCAATTGTTGCACCGCCATTGCTCGAGGGTGGGA
AAGTTGTTGGCATTCAATCGTTTAAGTCCCGAACGTTTGTGGCAACGGAG
CGGCGCATTCAAGTGTGGGACCGCGTGACCCTGGTGTCGGGCAACCTTCT
TGAGTGTGGGTCGAGCAAGGGCGAAGGAGAGGACAGCGACGCCCTTTTCG
AAGATAGCAAGCTAGTGGCGTTGATGCTTTTGGGCGACGTGCTGCTTGCT
TTGACAAGTCGAGGTCGGCTTCATCTCTGGAACGTTCATAGCCTGGAACC
CGTGCCAGCCCCTTCGGGTGGACCCAATCATATCGAGATCGAGGGCGATT
TCCGGACAGGTGGTGTCTTGGCTCACCCTACCACCTACCTGAACAAGCTG
CTCATTGGTGATGGAGCAGGCCGTCTCAGGCTGTGGAATATACGGTCGCG
GAAGCTTGTACACGCGTTTGAACTCCAGGGGGCATCAACTGGAGCGGCTG
TAACTGCCCTGGAGGCCAGCCCCGCCATTGACGTGGTGGCGATGGGACAG
ACTGACGGGACCATCAGCCTGGTCAATTTGCGTTACGACACCCTGCTTTT
CACCCTCCGTCAAGATAAAGTTCCCGTGACCTCTCTCTCTTTCCGCACGG
ACGCGTCCGCGGCGGCCCAAGCCTGTCCCATGCTCGCCTCAGGGGGTCAG
GACGGGCAGGTCTGCGTGTGGGACCTGAAAGCTCAGCGCCTCCACTCCAC
GGTGGGGGGTGCCGGAGGCACTGCTCATCAAGGACCCGTCTCCCGCGTCT
TTTTCTTCCCCCGGGAGCCCGTGTTGCTGACGGCCGGGGCCGACAACTCG
ATCAAGACCTGGATCTTCGACGCCGCAGACGGGAGCGCCCGGTTCCTTCG
GGGTCGTGAGGGCCACACAGCCCCACCACGGCGGATCCGATACTACGGCG
ACGTGACCGAGGCTAGCATGGGTACCGGCGCGAACGCAGAAGGCTGTCAG
ATCCTTTCTGCGGGCTCGGACCGGGCTTTCCGAGTCTTCCACACGGCACG
GGACGCCCAAAGTCGCGAAATGTCTCAGGGCCCGCTGCTCAAGAAAGCCA
AGCAACTGCATGTACGCCCCGAGGAGTTGAAGCTGGCGCCAATCCTGGCC
TTTGCCGCCTCCGAGACGCGGGCGCGTGACTGGTGTAACGTGATCACCTG
CCACGAGGGCGACTCGAACGCCTATGTCTGGAAATTCGACAACCGCGCTC
TGGGGAAGGCGGTGCTGCGTCAGCCTGATTGGGCCGGTGACAATGTCATG
AGCTCCCCCGAAAATTTAGAGCGGCAAGCGCTCTGTGTGGGTATCACCGC
CTGTGGGAACTTCGGAGTGGTGGGCACGCGGGGAGGGGTTGTCTATCTGT
ACAACATGCAATCGGGAGAGGCGCGAGGATCCTTTCCCCGGACGCGCGCG
GCGAAGAGCACGCCGCACGATTCCATGCGTCTGGCGCGGGGCCAGGCTCG
ACCGGGCTCGGTATGGGCGGCGCACAAGTCGGTGATGGACAAGGGGGTAG
TGGCGCGGAACTCCCAGACGCACGAGAAGGGCGCAGCCGGAAAAGGATGT
CCTGCGGGTGCCAGCCTTCCTACGCACTTTTTTCATCAGGGCCATGGCGG
CCCCGTGACGGGCGTGCAAGTGGATTGTCTGAGCAGGGTCTTGGTGAGCA
GCGGTTTGGACGGCATGCTACTTTTCTGGGATTTCAAGACCCACGCTTTA
TTGGCAGTGCTGAAGTTGGACGTCGGGATCGCACAGTTGGAAATAGCCCG
TGAAAGTGAGCTTTTGGCTGCTGCTTGCGACGATTTCGTCGTGCGTGTGT
ACGACATGATGACCCGCAAGCTAGTTCGCCGACTTGCGGGGCACACCGCG
CAGATATCAGACATGTGTTTCTCCCGCGATGGCCGCCGTTTGGTCTCAGC
CTCGGTGGATGCCACTGTCCGTGTCTGGGATTTGCCCACGGGCGCCTGTG
TGGACTGGCTGCGTTTTAAGCGGCCAGTGACCGGGCTGACGCTCTCTCAT
ACAGGCGAGTACTTGTGCACCTCCCACGTGGATCGACTGGGCCTGTACAT
GTGGGCAGATCGCTCATTTTTCCAGACGGTGGACCTGTGTAGCTCCGGCC
CCCCCACTACGCCCTGCGACTTGGACGAACCCACAGTCTTGACAGAGATC
GGCGAACTTAGCCTTGAGAATGGAGATGACAGTGCTAGGAAAGCCGAGGA
TGCCGTCCTGACAAGGGTGCCGCAAGCTTCTGAGGAAGAAGGGCTCAGCG
ACCCGCTGGCCATCAGTCCAAAGGAAGAGGGGCTCATTACACTTGCAATG
CTACCCCGCGCGCATTGGCAGACCCTCTTTCAGTTGGAGCTGATCAAGGC
CCGGAACAAGCCCAAGGAGCCACCGAAGGCGCCGCCGCGTGCCCCCTTCT
TCCTGCCAACCATGCACAACGGGGTCATCCCCACGTTCGCCCCCCCAACA
AGCGAAGCTGTCTCACCTCGCACAAATGGGAATACCGAGGACGGCGCGGA
TGCAGTCGATACGAGCGACATGGCACAAGCATGGTCGGATGATGACGATA
AGAGTGATGACGAGAAACAAAGCAAAGGATTGTCACAACAAGGTCGCGCT
GTCTCTGCAGCCCTGAATGCTGGGGCATTGCCGGCGGGGTCTCGCATTTT
GAAGAGAGGAAAGAAGGGTGCGAGCCGAGGTGCGCCTGTGCGGTCAAGGC
TTGGCGCGCTTCTTTTGGAGACGCAAACAGGGATACAGGAGCAGGATAAT
GCTGTCACCCAGCATTTGATGACTTTGGGTCCTCCGCAAGTGGACGTGGA
GATGCAAGCGCTATGTATGGGAAATTTCGACGAAGACGGTATGAAGTTGC
TGAGACTCACAGCCTCGTATCTGACCCGTCAGCTGGCATCACGACGGCAT
TTTGAAGCGATGCAAGCGTATCTGAGCAGATTTTTACAAATTTACGCACC
AATGCTTCTTGAGGCAGGGCCAAGCATGCGGAAAGTGCTTGGGAATTTGC
GTGACGCGCAGAAAGAGGCAAACGAGCAGATGAAGGACCTTGTACAGCAC
AACCTGTGCCTTCTGGGATTTTTCGTCAACCTGAAGGGCATTTGACAGGC
CACGAAAGAAAAAACATCTTCGTTGTATTGTGGGATAGAAAATGTTTCTT
TTATCTATCTGTGTCATTGGGCTACCCGGGATACAAGCTTTGACCAACAT
TCAGCCAAAGCAACCATCGGTGCTGTAACTTACGAGGCAGTCAGCCGTCC
TTGACTGCCCTTTGCGTGCAAATTATACATTTAAGATTTTCAGACGCAAG
TGCAACAAGATCTTGTGACAACCGCA back to topprotein sequence of rna855 >rna855-protein ID=rna855-protein|Name=rna855|organism=Nannochloropsis gaditana|type=polypeptide|length=458bp
MRAAKSQSRSRASVSTDKSLEGSEEVSGVLAEAEENGGEEEAAFRRQYAE
ASVRNEDSAPDKDVCEEERAIGSAKGSDRSVAQKGFKGFFGSQSVAEGEE
DDLAFPAVAAPPASETFRRRRLTFAMQGNIPPHTPLSQVQQRVFRSLEIG
DVPKVPLPFREGQVGTFSCHGIEPSYLDTRPFVAKINQDRGICVYPFAGH
ERMALFAVFDGHGEQGDKVSEFCMYEIPRALEAHSSLKGGDDNMIHTLKE
SFLTVDSRLNLEVGIDAFFSGTTAVACLVKGKRLWVANAGDSRCTLATAD
PAGTKRLLARDLSTDQNPDSPGEMARIIKNGGYVSPSPEPGLSARVWLDP
EYTQVGLAMARSIGDRAVKGVGVVAEPEVVEYSLAEDGSDKFLLLASDGV
WEFISSQEAVDIVNAHLEKGVSAACQVLIEQAAGRWRDVEGDYRDDITAL
LIMLPLFK back to topmRNA from alignment at CM002456.1:579017..581673- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna855 ID=rna855|Name=rna855|organism=Nannochloropsis gaditana|type=mRNA|length=2657bp|location=Sequence derived from alignment at CM002456.1:579017..581673- (Nannochloropsis gaditana)
AGCACAAGTCGAGCTTTGCTCTTGGTGCCCTCACCTGTGGCACGAGTATT
AGTGCGTCGATTAGATGGCAGCCACGGCAGGGGAAGGGCCGATTCCGGGT
CCTATGGCCCCCCATCCCTATGCCATCAAAAGCAAATCTCACTCCGAAAC
GTCCCCCGCGTTCACAAGCAAGCACTTCCAATTCGATTTTTCATAACCTT
TCGATAACATGTTTTGTCATGGTTGATAAATGTAGTGTTACGGAGAAGAC
ATATCAGGTTTGGTCTTGGATCAAGGTTCCGAACATCCATGTCGTGCAGG
AAGAACATGGCCTGCGTGGAGAAGTCGCTCGTCGTGGCGTGTACAATATC
CATGCGCACATACAAGTCTGTTGGCTGTAGGGAAAAAAATCACTAGAGAG
ACAGTCATGTATTTGCGCGGCCGGGTGCTTCTGTCTATCAACATCTCAAT
CGATTTCTTGAACACATGCAGTATTTCCATAGGAAAAATAGAAGGGGGCC
ATCATCTTCATGAGTGCGGAAACAGAGGCCATACATGGGTCTTCCCTTGA
GGAGATGGATTTGTGAGTTAAGGGGGAGGGGACGGGTAGGAGACAAGCTA
TAGCTTAAGCATATCTAAGAGAGTGGCAATGGTGGAGCATCTGCAGTCGT
CATCATAATCGCGGTACTCAATTTACTTCTGCGTGTATCCCCCCCTGTAT
TATATCTTCATATAAACCCGTATCGTAGTCAATACAAGACAGCTCCTTTG
GCGGCGGAGGAGTTCGACGATGAGAGCGGCGAAGAGGTACGAGCGGGCCA
TCAGCTCTCCTGTCCCTTGCCGGGGCTGAGGCAGTCGATTGCTCAGGAGC
GCCACTCCGTTGAGGAAGAAGCAAAGACCCCTTTTCCACCATCGCACAGC
CAATCCCGAAGTCGCGCGTCGGTCAGCACCGATAAATCACTTGAAGGGTC
TGAAGAAGTAAGCGGTGTCTTGGCAGAAGCGGAAGAAAACGGGGGGGAGG
AGGAGGCTGCCTTCCGTCGTCAATACGCGGAAGCTTCCGTTCGAAATGAA
GACAGCGCACCTGACAAAGATGTGTGTGAGGAGGAAAGGGCAATAGGGTC
GGCAAAAGGCTCAGACCGTTCAGTGGCGCAGAAAGGGTTCAAGGGTTTTT
TTGGCTCACAATCCGTAGCAGAGGGAGAGGAGGATGACCTCGCCTTCCCT
GCAGTCGCCGCCCCCCCTGCAAGTGAAACCTTCCGTCGTCGGCGCCTTAC
CTTCGCCATGCAGGGCAACATTCCTCCACACACGCCCCTGAGCCAGGTCC
AGCAACGCGTCTTTCGCTCATTGGAGATCGGTGACGTGCCGAAGGTCCCT
CTCCCTTTCCGCGAGGGACAGGTGGGAACCTTTTCCTGTCATGGCATTGA
GCCGTCTTACCTGGATACGCGGCCCTTTGTCGCCAAGATCAACCAGGACC
GTGGCATCTGCGTCTATCCCTTCGCGGGCCACGAGCGGATGGCCCTCTTC
GCCGTCTTTGACGGGCACGGCGAGCAGGGTGATAAAGTGTCTGAGTTCTG
CATGTACGAGATCCCACGCGCTCTGGAAGCACACTCGAGCCTTAAGGGAG
GTGACGACAACATGATTCATACCCTGAAAGAGAGCTTCCTTACGGTAGAT
TCGAGGCTCAATTTGGAGGTAGGGATCGACGCCTTCTTCAGTGGCACCAC
TGCGGTGGCCTGCCTGGTCAAGGGGAAGCGGCTTTGGGTGGCGAATGCAG
GGGACTCTCGGTGCACGCTCGCGACGGCAGACCCCGCGGGGACGAAGCGC
TTGCTCGCGCGCGACCTCTCCACGGATCAAAACCCAGATTCGCCGGGGGA
AATGGCCCGCATAATAAAAAATGGCGGGTACGTGAGCCCATCGCCCGAGC
CGGGTCTTTCAGCTCGCGTGTGGCTAGACCCAGAGTATACGCAAGTGGGC
CTAGCAATGGCGAGGAGCATTGGTGACCGGGCTGTGAAGGGCGTGGGGGT
GGTCGCAGAGCCAGAGGTGGTGGAGTACTCTCTGGCTGAAGACGGCTCGG
ACAAATTTTTGCTTCTGGCCTCAGATGGCGTTTGGGAATTCATTTCGTCA
CAAGAGGCGGTGGACATTGTCAACGCTCATTTGGAGAAGGGGGTGTCGGC
AGCCTGCCAAGTTTTGATCGAACAGGCCGCAGGGAGGTGGCGAGATGTGG
AAGGGGACTACAGAGATGACATCACAGCTTTGTTGATTATGCTACCTCTT
TTCAAATAGAAAATTTTAAATTTGGCCAAGAATCTGAAGGTGGGAAATGG
GAAGATAGCATTATGCGGAGAGGAGGGCTGGATTTTTGTCGGCGGTGAGG
CAATGGTCTTATCATGCACAAGAAAGGATTGCCGTCACATGTAACCGTCC
ACATGGCGGTAGACTCTTCTATTGGTTTTCTCAGAATGCACGTGTTCATA
GTCACACATGCGGTTGTCACAAGATCTTGTTGCACTTGCGTCTGAAAATC
TTAAATGTATAATTTGCACGCAAAGGGCAGTCAAGGACGGCTGACTGCCT
CGTAAGTTACAGCACCGATGGTTGCTTTGGCTGAATGTTGGTCAAAGCTT
GTATCCCGGGTAGCCCAATGACACAGATAGATAAAAGAAACATTTTCTAT
CCCACAA back to topCoding sequence (CDS) from alignment at CM002456.1:579017..581673- >rna855 ID=rna855|Name=rna855|organism=Nannochloropsis gaditana|type=CDS|length=2754bp|location=Sequence derived from alignment at CM002456.1:579017..581673- (Nannochloropsis gaditana)
CCAATCCCGAAGTCGCGCGTCGGTCAGCACCGATAAATCACTTGAAGGGT
CTGAAGAAGTAAGCGGTGTCTTGGCAGAAGCGGAAGAAAACGGGGGGGAG
GAGGAGGCTGCCTTCCGTCGTCAATACGCGGAAGCTTCCGTTCGAAATGA
AGACAGCGCACCTGACAAAGATGTGTGTGAGGAGGAAAGGGCAATAGGGT
CGGCAAAAGGCTCAGACCGTTCAGTGGCGCAGAAAGGGTTCAAGGGTTTT
TTTGGCTCACAATCCGTAGCAGAGGGAGAGGAGGATGACCTCGCCTTCCC
TGCAGTCGCCGCCCCCCCTGCAAGTGAAACCTTCCGTCGTCGGCGCCTTA
CCTTCGCCATGCAGGGCAACATTCCTCCACACACGCCCCTGAGCCAGGTC
CAGCAACGCGTCTTTCGCTCATTGGAGATCGGTGACGTGCCGAAGGTCCC
TCTCCCTTTCCGCGAGGGACAGGTGGGAACCTTTTCCTGTCATGGCATTG
AGCCGTCTTACCTGGATACGCGGCCCTTTGTCGCCAAGATCAACCAGGAC
CGTGGCATCTGCGTCTATCCCTTCGCGGGCCACGAGCGGATGGCCCTCTT
CGCCGTCTTTGACGGGCACGGCGAGCAGGGTGATAAAGTGTCTGAGTTCT
GCATGTACGAGATCCCACGCGCTCTGGAAGCACACTCGAGCCTTAAGGGA
GGTGACGACAACATGATTCATACCCTGAAAGAGAGCTTCCTTACGGTAGA
TTCGAGGCTCAATTTGGAGGTAGGGATCGACGCCTTCTTCAGTGGCACCA
CTGCGGTGGCCTGCCTGGTCAAGGGGAAGCGGCTTTGGGTGGCGAATGCA
GGGGACTCTCGGTGCACGCTCGCGACGGCAGACCCCGCGGGGACGAAGCG
CTTGCTCGCGCGCGACCTCTCCACGGATCAAAACCCAGATTCGCCGGGGG
AAATGGCCCGCATAATAAAAAATGGCGGGTACGTGAGCCCATCGCCCGAG
CCGGGTCTTTCAGCTCGCGTGTGGCTAGACCCAGAGTATACGCAAGTGGG
CCTAGCAATGGCGAGGAGCATTGGTGACCGGGCTGTGAAGGGCGTGGGGG
TGGTCGCAGAGCCAGAGGTGGTGGAGTACTCTCTGGCTGAAGACGGCTCG
GACAAATTTTTGCTTCTGGCCTCAGATGGCGTTTGGGAATTCATTTCGTC
ACAAGAGGCGGTGGACATTGTCAACGCTCATTTGGAGAAGGGGGTGTCGG
CAGCCTGCCAAGTTTTGATCGAACAGGCCGCAGGGAGGTGGCGAGATGTG
GAAGGGGACTACAGAGATGACATCACAGCTTTGTTGATTATGCTACCTCT
TTTCAAATAGATGAGAGCGGCGAAGAGCCAATCCCGAAGTCGCGCGTCGG
TCAGCACCGATAAATCACTTGAAGGGTCTGAAGAAGTAAGCGGTGTCTTG
GCAGAAGCGGAAGAAAACGGGGGGGAGGAGGAGGCTGCCTTCCGTCGTCA
ATACGCGGAAGCTTCCGTTCGAAATGAAGACAGCGCACCTGACAAAGATG
TGTGTGAGGAGGAAAGGGCAATAGGGTCGGCAAAAGGCTCAGACCGTTCA
GTGGCGCAGAAAGGGTTCAAGGGTTTTTTTGGCTCACAATCCGTAGCAGA
GGGAGAGGAGGATGACCTCGCCTTCCCTGCAGTCGCCGCCCCCCCTGCAA
GTGAAACCTTCCGTCGTCGGCGCCTTACCTTCGCCATGCAGGGCAACATT
CCTCCACACACGCCCCTGAGCCAGGTCCAGCAACGCGTCTTTCGCTCATT
GGAGATCGGTGACGTGCCGAAGGTCCCTCTCCCTTTCCGCGAGGGACAGG
TGGGAACCTTTTCCTGTCATGGCATTGAGCCGTCTTACCTGGATACGCGG
CCCTTTGTCGCCAAGATCAACCAGGACCGTGGCATCTGCGTCTATCCCTT
CGCGGGCCACGAGCGGATGGCCCTCTTCGCCGTCTTTGACGGGCACGGCG
AGCAGGGTGATAAAGTGTCTGAGTTCTGCATGTACGAGATCCCACGCGCT
CTGGAAGCACACTCGAGCCTTAAGGGAGGTGACGACAACATGATTCATAC
CCTGAAAGAGAGCTTCCTTACGGTAGATTCGAGGCTCAATTTGGAGGTAG
GGATCGACGCCTTCTTCAGTGGCACCACTGCGGTGGCCTGCCTGGTCAAG
GGGAAGCGGCTTTGGGTGGCGAATGCAGGGGACTCTCGGTGCACGCTCGC
GACGGCAGACCCCGCGGGGACGAAGCGCTTGCTCGCGCGCGACCTCTCCA
CGGATCAAAACCCAGATTCGCCGGGGGAAATGGCCCGCATAATAAAAAAT
GGCGGGTACGTGAGCCCATCGCCCGAGCCGGGTCTTTCAGCTCGCGTGTG
GCTAGACCCAGAGTATACGCAAGTGGGCCTAGCAATGGCGAGGAGCATTG
GTGACCGGGCTGTGAAGGGCGTGGGGGTGGTCGCAGAGCCAGAGGTGGTG
GAGTACTCTCTGGCTGAAGACGGCTCGGACAAATTTTTGCTTCTGGCCTC
AGATGGCGTTTGGGAATTCATTTCGTCACAAGAGGCGGTGGACATTGTCA
ACGCTCATTTGGAGAAGGGGGTGTCGGCAGCCTGCCAAGTTTTGATCGAA
CAGGCCGCAGGGAGGTGGCGAGATGTGGAAGGGGACTACAGAGATGACAT
CACAGCTTTGTTGATTATGCTACCTCTTTTCAAATAGATGAGAGCGGCGA
AGAG back to top
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