rna8547, rna8547 (mRNA) Nannochloropsis gaditana

Overview
Namerna8547
Unique Namerna8547
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length3829
Alignment locationKK037249.1:235406..237464 -

Link to JBrowse

Properties
Property NameValue
Productinositol polyphosphate multikinase
Orig transcript idgnl|cribi|Naga_100064g19.4103.mrna
Orig protein idgnl|cribi|Naga_100064g19.4103
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:235406..237464 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100064g19gene8284Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22146.1cds8520Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8547rna8547-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8547 ID=rna8547|Name=rna8547|organism=Nannochloropsis gaditana|type=mRNA|length=3829bp
AAATCTTCCTTCTTGCTACTCTTTGATGATTTTTATTTCACCCTTTGTAT
CCCCGATCCCACTTAATTGGCCTCAGGCGGCGAAGCACTCAGCAAGAGGT
TCTCCCTTTCTATGGAGTACTAGTTTGGATAAATCCAACATTGAGCACTT
TCTGCGAAGGGTGCAAATTACCTCTTAAAGGGTGCACTCAAGCGAAACTA
AATTCGCTCAGTAGGAAGGGCGTGTGCAGAGACATGGTCGCCATGGAGCG
TGAAACTTGTCCTCACGCGCCGTCTCAGGGGAACTTGGAGAAGACCGTCA
CAGATATTCATCCAAGGCAACACATCGCAGCCTACGGTCGTTATTCTCAC
CAGGAGTCTTGCCAGGTTCGAGAAGGAGGGAATGTTCATGGTGATGCGCG
CTTTGTCATGAGTGACGAGGACGGGAAAAGCTTGGATTGCAACGAGGAAC
TTGGGGACGCGCTGGAGACAACCTTGGGAGTTGAGAACCGCCCCCCTACT
TTCTCAAACGACCGACCTGGCATCCGATCCGAGCCGCAAACTCATCCATT
CCAGCACCTACAGCGGTTCCCACCTCAGCCCCAGCGCGTCTCTGACTGTA
TTCCGCCGCCACTGAACATGGCCAAGGTACCCAAGTTCTCGGAGCACTGT
GGCCGGACCAGTGTTACCCGTATTACCTCAGGTCATCCTCCGCCCCCTCC
CCCGCCGCCCCGCACGGCCTTTGGACGGACACAGAGCCTTCCTAGCCTCT
CCAAGCCACCCCCTCCGCCCCCTCCCCACCTGCTTCGGCAGCGGTCGTAC
TCCTCCCTCTCCCGGCCCTACCGGTCACGAACGGGCCAATTCCTCTCCCA
GCACTTGGACGCAGTGGACGAATCCGACCCGGAGGACGTGGCGGAGATGG
TCTTGAACATGCACATCCAGGAACGGGACTATTACGCTCCTCCCTGGGCC
TATTTCTGCCGCCTGGAGAAGGACCCGGTGCTTGCCTACTGGCGGCGCGG
CGCGTTCCAATGGTTCTCGCGTGTCGTCCAACACATGCTGGGGAACCGGG
AGATAATCCCAATGGCCACGAATTTCCTGGACCGGTATTTGGCGGCGTCG
CTGTACCCACACTTGACGGGGCCGTACGCGGCTTCGCACCCGAGTCCCGT
CGCTCCCTGGGCACCGATGTCGGGGGAGGGCCTCGAGACGGAGGGCGAGT
GCTCGCCGGCTCTGGGCGTCGGGCATGGGTGGGAAGGGCAGGAGAACTTC
GGCCGCGTCTTGTCCGCCGCCTCCCCCAGCCTGGGACAACTGGATGGAAG
CGACGAGGTGCCCGTGCCGGCCGTCCTGGCGGACGAGCGCACCTTTGAGA
AAGTGGCTGTCTGTGCGCTGATCCTTGCCTTGAAAATGCAACAGGGGGAC
AGCACGATGAATGTGGCGCGAAAGTTGACGAATCTGACCAGTGCCTGTCA
TCTGAGCCAGGGTGCCTTGTGTGCGATGGAGTTTCGGATGATGGGGGCGC
TGGGACGGTACTTGAACCCGCCCACACCGGGCACGCTCATCCACCACCTC
TTGCATTTCCTCCCCGCCCGAAGGGAGAACCGGGCCCTCTTTTTGGTTCT
GGACGACCACGCCAACGATTTGGCGCTAATGGCTTTGGAAACACCGGAGC
TGGTTCGTTTCCCGGTCTCGATCATCGCCGTGGCGGCCATCCTAGCCTCC
TTCGGGTGGGTTCGGAGCTGCCTGAAAGGGGAGGGGGCCGGGGCGGTGGG
CGGACCGATGGAGAGCGGCCACCATGGGGAAGAGGAAATGAGCCCGGGCA
TGGAGATGGAATGGTTGCAGACGCTGGACGCAAAGGACCTGAAAATTGAC
TGGGAGGAAGCCCATAATTGTTTGGAAGTGCTGGCTCGAGAGGCGAAGAA
AGCAGCCGCGCTCCCCGACCGGGGGGAAGGCTGGGGGGGTAGCATCTACT
TGCCTCAATTCCTGGCCCTGCCCCCCGCCCTTCTCTCTCAGTTGGGGGGA
AGGCCGACGTGCGTGCCGCACACGCCGGCTCCCTGCGCGGAAGTGGAACC
AGGGGTGCAAATGATCAGTCCCTCCGGCGTCGAGGACATAGGAGTCGTCG
AGCAGGCATCTCTTTATCCCCCAGGTGCCCCCCTGGCCGCGATACCTGGT
AGGCGGGGAAAAAGAGGACTGGGGGCACGCTCAGACCCGGGCCCCGTGCA
ACGTCTGGGTGGACAGCCTCAAGGGGGCTTCTATCACCCACCAGTGGGCT
CCGGCGCCGCCTTCTCGAAGGGAAGTGCTGGGAAGGAGCCTGTCCTCCCC
GCACCCCACGGCCTCCCCGTGCCGTGTCGACCCAGCTTCCACGTCCCGCA
TTTGCAACATGGGAAACATCCCAAGCAGGTGTATGCGCATTATTTTGGGA
ACCATCCGGCCCCGCCCCCGCCCGCGCAGGCGGCCTGCCTGGTGGAAGGG
CGCATGCACGCCATGCCGCCCCCTCAAAACCGACTGGAGGCGTCTGTGAA
TTTGCAGCCGCAGAGTAAATACCAGCAATACCAACAGCAGCAACAACAGC
AGCGTTGGCTGCAGCAGCAACAGCATTGGCAGCAACAACAGCAGCACTGG
GTGCAGCAGCAACAGCGGCAACAATGGTCCTAGGAGCACCCTGACGGGCC
ACTGCGTGCATTTCGGGTGGGATAGGCGAGTGTGCGTGAGAGCTTTGAGC
GCTTTCACTTGGAGAAATCCACTTGTTTTTGTCCGTCCACACTTATTATG
TTTTCAACGCAAGGTGATGAGTAGCGTGCTGCAGCGGCTGACCATTTTCA
AGCTTCATGAGAGCTACCGATTTCTGCAAGAAGAGTTGTAAGAGTCAAAA
AACCCAGCAAGCGACCGAAGTCTGGAGTTGGCGGTCATAGAAGAAATTTT
CGAAGGCACTTTTTTAATTTAGGATGAAATGTAGGGTTTGAGAGGAGAAC
TGTTCAAGATAGAATGTAAGAGAGCACCCATCAGAAAGGAAATGACAACG
AAACGAAATCGAAGATGATAGCATGTTTTTTAAATCCGAGATAATATGAG
AGAATGTACCATGTATGAGTAATTGGATGATCAGCACACTTCGAATTTTG
CATTTAGGAGGAGACACGGGGGGGTGAACATGACGTCACCGTGGCGGAAT
GCGCGGTGCGTCGTGTCGTTCGTAATACTGACAGAGCATGACAACAAAAG
AAGGTCGAATGCTGGCGCGAACGCAAGCAAGCATGAGGCGTGGAGAGCAG
CACACAGGTGTGGTTGTGATAAGGAGGGAACCCGTAGACGCCTGTCGTAG
GAGCCATGCCAGGTAGCACTGGATGTCCGAGGAGGCGTGTAGTCTTCCCG
TAGTCCACGGAAAGCAGTAGAGGAGGTCGAAGGGATGGGTAATCCCCTGA
GTTTTGGAAGAAGGTCGCAAAGACAGCAAGCAATTGCTGTAGCAGATGAC
GAGATACTATCTTGTGACGTGAAATGCATAGGATAATGCTTCACGTGGCG
ATATTTGGGTATCGGGGGGCGATGTGCGTTCGTGGGAAATGAGAATGAAC
AAACTTGGAATAAGTGTAAGATCGGTGAGTGAAGTGAGACGCATGTGAGA
AATTTTGGCGTTGGATGTAAGGGGAGATGAGAACATGACCTGGAAGAGAG
TATGGGGAGGATGCGGCCTGAGATTGGATGTGATTATAGTAGTGTCAAAG
TGCGTACAAAATCGATGCGGCCTTACTGCGGCCGAGCACCCACGTCGCAG
GGAGGAGTCAAGAGATCGACGTGACAGCGGAGGGTAAATGAGGAGGACGC
AGTGAAGAATATCGGATGGATCGACCCCG
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protein sequence of rna8547

>rna8547-protein ID=rna8547-protein|Name=rna8547|organism=Nannochloropsis gaditana|type=polypeptide|length=427bp
MVILSRLPMQSVDDPRLPGCAGGNTYDVLPMPYQVGGHKPKDASDPPYML
RLQPRVAPHCSNPSSTSSNDATQPPRLLKVIQAGDKGAREAAFYHKLFGQ
DGMDGLKEDEINVWRSLRPFVPCYYGVLTRSDPTGNPRRYLVLEDISAPP
NPGVNDGFCHCPTILDIKIGLRTYAPWATLQKQKRERDKYMHQEAVGFRI
VGMRVYDADAKSYVVEGKEYGRNLRPEEVLFALARFLGRGRSLGVGGHAR
NDPGPGSLRSRQAKDGRQEGESERPKGKGEACPEGEGAVPEMERGEQEGA
VRRLDWFIARVAALLDWFQGQACLCFWSSSLLFVDHQAWDRAGGRGPVSW
VPRGQGARKEGAPPEETAALDVRMIDFAHVQVREGGDGEEVEGGEDGWDS
GRENYAQGLRSLLEHLQRLRREAAGMP
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mRNA from alignment at KK037249.1:235406..237464-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8547 ID=rna8547|Name=rna8547|organism=Nannochloropsis gaditana|type=mRNA|length=2059bp|location=Sequence derived from alignment at KK037249.1:235406..237464- (Nannochloropsis gaditana)
CATCCTATTGCATGTCATGGTCGTGCATTTTGATGAAAACATGTGAAATG CATGGCATGCGCGAATATGGGCATACTTTCCGCCAAAACGCATCATTGTA TGATGGGTAACCGGGGAGGCTCAAGTACAGGTTGAGCTATTCCAAAACCG TCTTTTTTCTCATAATTTCACCACTGAAGTGATGAAACACATATGACAAG ATAGTCTTTAATCATGTCATATCATCTTACGGAAATCATGTCCAATTTCC TGTCATACTGCCGCACACAGGAGCCAGGTTGCGTCTCTCTGACTCTTGCA CTTCACCGACTCATACACCATCTTATGGAAATTCAAACGGCGTCGTCATC TTTTCCTGAGCCTGAGCATTCATGAGTCGCAACAATTCAGCAATGCAAGT CGCGGTACCTCCTCGTAAGCATGGTTATTCTCTCAAGGTTACCGATGCAG TCAGTAGATGATCCTCGCTTGCCTGGTTGTGCTGGGGGGAACACCTACGA TGTGCTTCCCATGCCCTATCAAGTGGGCGGGCACAAGCCTAAAGATGCCA GTGATCCTCCTTACATGTTGCGCCTGCAACCACGCGTCGCACCCCATTGC TCGAATCCTTCCTCCACATCCTCAAACGATGCGACCCAGCCTCCTCGACT TCTCAAAGTGATCCAAGCAGGGGACAAGGGAGCGCGAGAAGCAGCTTTCT ATCACAAGCTTTTCGGACAGGACGGCATGGATGGTTTGAAGGAAGATGAA ATAAATGTTTGGCGCTCCCTACGTCCCTTTGTCCCGTGTTATTACGGCGT CCTGACACGTTCCGATCCGACGGGCAATCCTCGTCGCTACCTTGTTTTGG AAGATATATCAGCACCTCCCAATCCGGGGGTGAATGATGGCTTCTGTCAT TGTCCGACAATCTTGGACATCAAAATTGGTCTTCGGACATACGCTCCCTG GGCTACATTGCAGAAGCAAAAGCGAGAGAGAGATAAATACATGCACCAAG AAGCTGTCGGGTTTCGGATTGTGGGCATGCGTGTGTACGACGCAGACGCC AAGAGCTACGTCGTGGAGGGAAAGGAGTACGGACGGAATCTGAGGCCGGA GGAAGTCTTGTTTGCCTTGGCACGCTTTTTGGGGCGGGGTAGGAGCCTTG GGGTCGGGGGGCACGCGCGAAACGACCCAGGCCCGGGAAGTTTGCGTTCA AGGCAGGCAAAGGATGGTCGGCAGGAAGGAGAGTCTGAAAGGCCGAAAGG AAAAGGAGAGGCGTGCCCTGAAGGTGAGGGGGCGGTGCCTGAGATGGAGA GAGGGGAGCAAGAGGGGGCGGTGCGACGCCTGGACTGGTTCATAGCCCGC GTGGCGGCCTTACTCGACTGGTTTCAAGGCCAAGCCTGCCTTTGCTTCTG GTCTTCAAGCCTCTTATTTGTCGATCACCAGGCCTGGGACCGTGCCGGGG GTCGGGGTCCCGTGTCCTGGGTGCCGCGGGGCCAGGGTGCGAGAAAGGAG GGGGCGCCGCCGGAGGAAACAGCGGCGTTGGATGTGCGGATGATCGATTT CGCCCATGTCCAGGTCCGGGAGGGAGGAGACGGGGAGGAAGTCGAAGGAG GGGAGGACGGGTGGGATTCCGGGCGTGAGAACTACGCGCAGGGGTTGAGG TCCCTCTTGGAACATTTGCAGCGACTGCGACGAGAAGCCGCGGGCATGCC TTGACTTGGGCTTCGGAGATCGCTGCCGTCTCACAAAAACTATGTGTTTG ACCTGCATGCACACCATGACGAAGCGTCGGCAACACTCGCGGCAGAGCGG TCGATTGTACACGCGCGGACTCGAGCCGACGGTGTGGGAAAAGTACTTCA AAGGAATGAGATATTTGAGAAGCACGACGGGGTCGATCCATCCGATATTC TTCACTGCGTCCTCCTCATTTACCCTCCGCTGTCACGTCGATCTCTTGAC TCCTCCCTGCGACGTGGGTGCTCGGCCGCAGTAAGGCCGCATCGATTTTG TACGCACTTTGACACTACTATAATCACATCCAATCTCAGGCCGCATCCTC CCCATACTC
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Coding sequence (CDS) from alignment at KK037249.1:235406..237464-

>rna8547 ID=rna8547|Name=rna8547|organism=Nannochloropsis gaditana|type=CDS|length=1284bp|location=Sequence derived from alignment at KK037249.1:235406..237464- (Nannochloropsis gaditana)
ATGGTTATTCTCTCAAGGTTACCGATGCAGTCAGTAGATGATCCTCGCTT
GCCTGGTTGTGCTGGGGGGAACACCTACGATGTGCTTCCCATGCCCTATC
AAGTGGGCGGGCACAAGCCTAAAGATGCCAGTGATCCTCCTTACATGTTG
CGCCTGCAACCACGCGTCGCACCCCATTGCTCGAATCCTTCCTCCACATC
CTCAAACGATGCGACCCAGCCTCCTCGACTTCTCAAAGTGATCCAAGCAG
GGGACAAGGGAGCGCGAGAAGCAGCTTTCTATCACAAGCTTTTCGGACAG
GACGGCATGGATGGTTTGAAGGAAGATGAAATAAATGTTTGGCGCTCCCT
ACGTCCCTTTGTCCCGTGTTATTACGGCGTCCTGACACGTTCCGATCCGA
CGGGCAATCCTCGTCGCTACCTTGTTTTGGAAGATATATCAGCACCTCCC
AATCCGGGGGTGAATGATGGCTTCTGTCATTGTCCGACAATCTTGGACAT
CAAAATTGGTCTTCGGACATACGCTCCCTGGGCTACATTGCAGAAGCAAA
AGCGAGAGAGAGATAAATACATGCACCAAGAAGCTGTCGGGTTTCGGATT
GTGGGCATGCGTGTGTACGACGCAGACGCCAAGAGCTACGTCGTGGAGGG
AAAGGAGTACGGACGGAATCTGAGGCCGGAGGAAGTCTTGTTTGCCTTGG
CACGCTTTTTGGGGCGGGGTAGGAGCCTTGGGGTCGGGGGGCACGCGCGA
AACGACCCAGGCCCGGGAAGTTTGCGTTCAAGGCAGGCAAAGGATGGTCG
GCAGGAAGGAGAGTCTGAAAGGCCGAAAGGAAAAGGAGAGGCGTGCCCTG
AAGGTGAGGGGGCGGTGCCTGAGATGGAGAGAGGGGAGCAAGAGGGGGCG
GTGCGACGCCTGGACTGGTTCATAGCCCGCGTGGCGGCCTTACTCGACTG
GTTTCAAGGCCAAGCCTGCCTTTGCTTCTGGTCTTCAAGCCTCTTATTTG
TCGATCACCAGGCCTGGGACCGTGCCGGGGGTCGGGGTCCCGTGTCCTGG
GTGCCGCGGGGCCAGGGTGCGAGAAAGGAGGGGGCGCCGCCGGAGGAAAC
AGCGGCGTTGGATGTGCGGATGATCGATTTCGCCCATGTCCAGGTCCGGG
AGGGAGGAGACGGGGAGGAAGTCGAAGGAGGGGAGGACGGGTGGGATTCC
GGGCGTGAGAACTACGCGCAGGGGTTGAGGTCCCTCTTGGAACATTTGCA
GCGACTGCGACGAGAAGCCGCGGGCATGCCTTGA
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Synonyms
Publications