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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101025g1.9495.mrna |
| Orig protein id | gnl|cribi|Naga_101025g1.9495 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:201133..203533 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8537 ID=rna8537|Name=rna8537|organism=Nannochloropsis gaditana|type=mRNA|length=2269bp
GCTACCTGTCAGGCGGTGGGGACCGCTGTCCTACCCAAGCTCCCTGCCTT
CATCACCACGGTCCTTGACCGCCTGGACTCGCCCTCCCCCTCGTCCTCCC
CCCCGCCTCCCCCTCGTCCTCGCCTCGGGTGCCGGATGCCGCCTTGGTCT
GTGTCACCTCCCTCCTGACCGCAGTGCCCAATTTCCTCAACCCCTTCCTC
CCCCGGCTCCTTACCTGCCTGCTCCACACGTCCACCTTTCCTTCCTCCAC
CTTGTCTTCTGTGTTGGACCTGATTGCGACTGCCCTCCCGGCGCGTCTTC
TCCTCCCGATCCTATTCGCCGCTTACCCGTCCTCCCTCACGCCTTCTCCC
CCGCCGTCCCCCGAGGCTATGCTTCGCTTGTTTCGGGTCGTGCGACGTGT
CATCGAGACGCAGCAAAGGGAGTCTCTCTTGGGAGGACACGGGAAAGGGG
GGGGCGGAGTGAACGTGTGGACCGGCTTCTTCCTACTGGCGATGGACTAT
AGGAACCACGTGGGGTGGACAGAGGGAGGGAAAGAAGGAAAGAGGAAGCG
TCCTCGGGGGGAAGAGGGCGTGCTGGAAGGCGAGGGAGGAGATAGGGCAA
AGGTGGAGGAGGTGGAGGAGGCCGTGTGTGAGAGCATGCTGGCGTTGGTT
TTGCGTTTGAACGAAGAGGAGCTTCGCGCCCTTTTCTTGCGCGTGGCTCA
TTGGAAGAAAAGTGGCGATGGGGGGAGAGAAGGTGGGCAGCGATCCCGGC
GTTTGGTCTTTTATCGGCTTCTGGGATATTTGGTTGAGACGTTGCGGAGC
ATTTTTGTGCCATACTTTGGCTACATCTGGAGCGACATTCAAGCAGACTT
ACGTCTTTTCTCCATCCCGTCCTCCTCCTCTGTGCCCTCCAGCATTCTTG
CCGTTCACAACGGGGAAGTCTCCAAGGAGAAGAAGAAGGAGAAAAAACGT
CGGCGGGAGGAGGAGGGAGCCACCGGGGAGGACAGGATGGAGGGCGGGTT
GGAGCCTGAGAAGCAAGGCCCGATCCTCATCACCCTGATCTTGACGGCTT
TGACCAAGTGCTTTCAGTGCGACGACGAGGGCGAGGAGGACGGAAATTTC
CTGACGCAAACGCGCTTTGACGCCATTCTTCCCCTCCTCACGGGACTGAT
AACGGGCCTCCACTCCTTCCTCCCTCCTGCTTCCTCCCCCTCTGCTAATT
CCACTTACCGGGCACTGGCGGAGGCGAATCTCATCCCTTGCCTCGCTTAC
ATGGCCCTGGCGGCGGGGAAAGACGTGTTGTGGAAGCCTTACCACCATCA
GGTGCTCATGCAGACTCGGGCACGAGCCTGGGAGGTCCGCTGGGTGGCGT
TGCGGACGCTGAGAGAGACCTTCGTCGTAGTGGGCGAGGAGTACCTGGCC
ATGCTGCCGGAGAGCATTGCCTACTTGAGCGAACTATTGGAGGACGAGAG
GGAGGAGGTGGTGGAGGAATGTAAGACTACCATTGCCTACATTGAAGACT
TGAGTGGGGAGAGTTTGGAGAGTTATTTGGCCTAGGGGGGAGGGAAGGGA
AGAGCGATCCGTGTGGTGCTGTTTTGGCTGTCCCCTTCGTCGGATTTACG
GGCTTACCCGCATCCTTTTGATGAGCAGGGACAGGGACCCGGTCTCTGAT
AAAGTCCTTGCTATTACTCGAGTGGATAGGGCTCTGCTTTCTAGGAGGAG
CAAGTTGGGCGCATACATCGGGGCCGTGACTTCTTTGTAGTTTTCTACAT
CAGAAAACGCATGTTTGGTTGGGATTAGGTGTGCAAAGAAGTCCGAACCT
TTTGAAGGCCGAAGAATGTCGAGCGCTGATGGTGCCAATAGAGCTCTCAA
GAATGTCTTACCAAAAAAGGGACTCGGCGCAGCGGCCTAAATATACAGGG
TTTAGACTCTGGAGCGGACAATATAATGATTAAAGAGAGAAAAATTTGGC
CGCTCTGTGCAGGATTAGTGGGGACGCTGCCTCTGTATGTAATGAGGGCA
GGCAATCGCAGTGTTTTACCGGTCGATGTAAGTACAGAGAACTAGAAGGA
AAACTCAAAGGATCAAAAGGGTCAGAGGTCAAAAGGGTAAGGATTTTAGT
GTCGAGGTAGAGCGTCACACATGCTGCGGCCTGTTTCATCCCTCCACATT
GCTTTCATGTACGACCAACCCATGCTCTGTTTTTTTGGGATTTAAAGAGG
CAAAAATCTCGTCCACGAAAAGTCAATTAGGGCTTGATTACAGGTATAAG
ATAGTAGCTCAATCTCGCC back to topprotein sequence of rna8537 >rna8537-protein ID=rna8537-protein|Name=rna8537|organism=Nannochloropsis gaditana|type=polypeptide|length=653bp
MAALNREAAFFLLDARNALPALRKALRESGMTGSTSPSTSCPPSSSTSPL
PGLLLAHLLRERTPFSHVGQVLMTMLFREPWVPSLALLPSLRTLVDRIEQ
GGKEEDRVEESKVRQRARSLVLQQLLHAPSSPLPSSLPSPGLPQGVVDLL
RSLLFNELQGRKRGFTLLPSLLPLLDHGPALSPSLVLTLEQASSEWAKDC
LPGEERLRWWESVFQVLVEAEEGGEGGGEGGEDEVSVQVLRTVACRLLDA
EEFMEVFEGMFSLPGGSKDVGGNEGSPTGDGSRGSNGKNGKRGTPRKKTN
PKSPEGMEGARAGGKEGGRKGGQAQVLVALELLQEFRRQEEASHHPGKGV
NDLHGLHQSTETLLDTAKATRKSKATWSRLIPVLLRLLPPSPVSDTRDPS
PSLPSLASQGEAHVEFRQLLALDTACDILDEEARGEDAGEGAGEGGADLE
TTPLLSLVEATASLHVRRSAVKLLGLLVRRFPRLRAKALAYLFDWIGTDA
PWERAPSFSLLVRVLEHVVPAALASSPATSSDLFTIAHTLTSAHDRILPS
RRLPLYHALLRSLGDSRLAFLQFLLLLQHCAAPNTARKGEEEDGTEALLG
LTEALAGKVSEMQELFSAGDLLEMGHALLRVACGNGVHGQAGLSSPTTLA
GCG back to topmRNA from alignment at KK037249.1:201133..203533- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8537 ID=rna8537|Name=rna8537|organism=Nannochloropsis gaditana|type=mRNA|length=2401bp|location=Sequence derived from alignment at KK037249.1:201133..203533- (Nannochloropsis gaditana)
ATGGCGGCACTGAATAGGGAGGCTGCATTTTTCCTCCTGGATGCGCGCAA
TGCCCTGCCCGCGCTGCGAAAAGCCCTGCGAGAGAGTGGGATGACCGGCT
CAACCTCCCCCTCTACCTCCTGTCCACCCTCCTCCTCGACCAGTCCGCTT
CCAGGCCTGCTTTTGGCGCACTTGCTACGGGAAAGGACGCCTTTCAGCCA
TGTGGGGCAAGTCTTGATGACCATGCTTTTCCGCGAGCCGTGGGTGCCCT
CTCTGGCCCTCCTTCCCTCCCTCCGCACCCTGGTGGATCGGATCGAGCAG
GGCGGGAAGGAAGAGGACAGGGTGGAAGAAAGCAAGGTCAGGCAACGCGC
CCGGAGTTTGGTGCTGCAGCAATTGCTCCATGCCCCTTCCTCCCCCCTGC
CCTCAAGCTTGCCCTCCCCAGGCCTCCCCCAGGGCGTGGTTGACCTCCTG
CGGTCCCTCCTCTTCAACGAGCTCCAAGGCCGCAAGAGGGGATTTACCCT
CCTTCCCTCCCTCCTCCCTCTCCTGGATCACGGCCCGGCTTTGAGCCCCA
GCCTCGTTCTGACCTTGGAGCAGGCGTCTTCGGAATGGGCTAAAGACTGT
TTGCCAGGGGAGGAACGGCTGCGGTGGTGGGAGTCCGTCTTCCAAGTCCT
TGTTGAGGCGGAGGAAGGAGGGGAAGGAGGGGGGGAGGGGGGGGAGGATG
AAGTATCTGTACAGGTACTTCGGACAGTGGCCTGCCGACTCTTGGATGCG
GAGGAGTTCATGGAAGTCTTTGAAGGCATGTTCTCCCTCCCAGGCGGTAG
CAAGGACGTCGGCGGCAATGAGGGTAGCCCTACCGGCGACGGTTCGCGGG
GTAGCAACGGCAAGAATGGGAAGCGGGGTACCCCCAGGAAAAAAACGAAT
CCCAAATCGCCGGAGGGTATGGAGGGGGCGAGGGCGGGGGGGAAGGAAGG
CGGGAGGAAGGGAGGGCAGGCTCAGGTGCTGGTGGCCTTGGAGCTTTTGC
AAGAGTTCCGTCGTCAAGAGGAAGCCTCGCACCACCCCGGGAAGGGCGTC
AACGACCTTCACGGCCTGCATCAATCCACGGAGACCCTGCTAGACACCGC
TAAAGCTACCCGGAAAAGCAAAGCTACCTGGTCGCGGCTCATCCCGGTTC
TCCTCCGCCTGCTCCCCCCTTCCCCTGTTTCCGACACTCGGGACCCCTCT
CCCTCCTTGCCTTCACTTGCCTCGCAAGGGGAAGCTCACGTGGAGTTTCG
GCAGCTCCTAGCTTTGGACACTGCCTGTGATATCCTCGACGAGGAGGCCA
GGGGGGAGGATGCAGGGGAGGGCGCGGGGGAGGGCGGGGCTGACCTGGAA
ACGACGCCTCTCCTGAGCCTGGTCGAGGCCACCGCCAGCCTGCACGTCCG
CAGATCGGCCGTAAAGCTTTTGGGACTCTTGGTCCGTCGCTTTCCGCGAC
TCCGCGCCAAAGCCTTGGCGTATTTGTTTGATTGGATCGGAACGGATGCC
CCTTGGGAGAGGGCTCCGTCTTTTTCCCTGCTTGTCCGGGTTTTGGAGCA
CGTGGTGCCCGCGGCCCTAGCTTCCTCCCCTGCGACATCGTCCGATCTTT
TCACGATTGCTCATACCTTAACCTCTGCCCACGACCGGATCCTCCCTTCC
CGCCGCCTGCCCCTCTACCACGCCCTCCTTCGCTCACTGGGTGATTCCCG
TCTGGCGTTCCTGCAATTCCTCCTTCTCCTCCAGCACTGTGCAGCCCCGA
ATACGGCGCGCAAGGGCGAGGAGGAGGACGGGACGGAGGCCCTGCTGGGT
TTGACGGAGGCCTTGGCGGGGAAGGTCTCCGAGATGCAAGAGTTGTTCAG
CGCCGGCGACCTGCTCGAGATGGGCCACGCCCTCCTACGGTACCTTCTTG
GCCGGCAAGAGAACGTCGAGGGGGATGAGGCGACGGAGGGAGGGGTGAAG
GACACGGGGGAAGAGGGGCGGGAGAGCCACCTTTGGGTTTGTCATCTGCG
CTCACGGCGGGACCTGTCGGGGAAGGATAGCCTCCCTCCCTCCCTCCGTC
CCTCCCGCCCTGCCCTTGCCCTCGACCTCGAGCCCGCCCTGCGGACCGTC
GTCACGACATCAGTCCGAGAGGAAGGGGGAGAGGGGGGGAAAATGGCAGG
GATGGAGGAAGAAGTCGCGCGGGTGGGCCGCATCTTGCTCTTGCTGGGGC
AGACGACTCGAAAGTCTCTGGCTCGGCGGGTGGCTATGCGTCGGGAAAGT
GACCTCTCCCCCGCGGCCCAACGGGGATATCTTTTGCTCGCGGAAGAAAC
CTTAAGGTTCCTCCACACCCTGGCTCAGAGTGGCTTGCGGCAACGGGGTA
CACGGGCAGGCAGGGTTGTCCTCCCCGACGACACTGGCAGGCTGCGGGTG
A back to topCoding sequence (CDS) from alignment at KK037249.1:201133..203533- >rna8537 ID=rna8537|Name=rna8537|organism=Nannochloropsis gaditana|type=CDS|length=3924bp|location=Sequence derived from alignment at KK037249.1:201133..203533- (Nannochloropsis gaditana)
AGTGGCTTGCGGCAACGGGGTACACGGGCAGGCAGGGTTGTCCTCCCCGA
CGACACTGGCAGGCTGCGGGTGAATGGCGGCACTGAATAGGGAGGCTGCA
TTTTTCCTCCTGGATGCGCGCAATGCCCTGCCCGCGCTGCGAAAAGCCCT
GCGAGAGAGTGGGATGACCGGCTCAACCTCCCCCTCTACCTCCTGTCCAC
CCTCCTCCTCGACCAGTCCGCTTCCAGGCCTGCTTTTGGCGCACTTGCTA
CGGGAAAGGACGCCTTTCAGCCATGTGGGGCAAGTCTTGATGACCATGCT
TTTCCGCGAGCCGTGGGTGCCCTCTCTGGCCCTCCTTCCCTCCCTCCGCA
CCCTGGTGGATCGGATCGAGCAGGGCGGGAAGGAAGAGGACAGGGTGGAA
GAAAGCAAGGTCAGGCAACGCGCCCGGAGTTTGGTGCTGCAGCAATTGCT
CCATGCCCCTTCCTCCCCCCTGCCCTCAAGCTTGCCCTCCCCAGGCCTCC
CCCAGGGCGTGGTTGACCTCCTGCGGTCCCTCCTCTTCAACGAGCTCCAA
GGCCGCAAGAGGGGATTTACCCTCCTTCCCTCCCTCCTCCCTCTCCTGGA
TCACGGCCCGGCTTTGAGCCCCAGCCTCGTTCTGACCTTGGAGCAGGCGT
CTTCGGAATGGGCTAAAGACTGTTTGCCAGGGGAGGAACGGCTGCGGTGG
TGGGAGTCCGTCTTCCAAGTCCTTGTTGAGGCGGAGGAAGGAGGGGAAGG
AGGGGGGGAGGGGGGGGAGGATGAAGTATCTGTACAGGTACTTCGGACAG
TGGCCTGCCGACTCTTGGATGCGGAGGAGTTCATGGAAGTCTTTGAAGGC
ATGTTCTCCCTCCCAGGCGGTAGCAAGGACGTCGGCGGCAATGAGGGTAG
CCCTACCGGCGACGGTTCGCGGGGTAGCAACGGCAAGAATGGGAAGCGGG
GTACCCCCAGGAAAAAAACGAATCCCAAATCGCCGGAGGGTATGGAGGGG
GCGAGGGCGGGGGGGAAGGAAGGCGGGAGGAAGGGAGGGCAGGCTCAGGT
GCTGGTGGCCTTGGAGCTTTTGCAAGAGTTCCGTCGTCAAGAGGAAGCCT
CGCACCACCCCGGGAAGGGCGTCAACGACCTTCACGGCCTGCATCAATCC
ACGGAGACCCTGCTAGACACCGCTAAAGCTACCCGGAAAAGCAAAGCTAC
CTGGTCGCGGCTCATCCCGGTTCTCCTCCGCCTGCTCCCCCCTTCCCCTG
TTTCCGACACTCGGGACCCCTCTCCCTCCTTGCCTTCACTTGCCTCGCAA
GGGGAAGCTCACGTGGAGTTTCGGCAGCTCCTAGCTTTGGACACTGCCTG
TGATATCCTCGACGAGGAGGCCAGGGGGGAGGATGCAGGGGAGGGCGCGG
GGGAGGGCGGGGCTGACCTGGAAACGACGCCTCTCCTGAGCCTGGTCGAG
GCCACCGCCAGCCTGCACGTCCGCAGATCGGCCGTAAAGCTTTTGGGACT
CTTGGTCCGTCGCTTTCCGCGACTCCGCGCCAAAGCCTTGGCGTATTTGT
TTGATTGGATCGGAACGGATGCCCCTTGGGAGAGGGCTCCGTCTTTTTCC
CTGCTTGTCCGGGTTTTGGAGCACGTGGTGCCCGCGGCCCTAGCTTCCTC
CCCTGCGACATCGTCCGATCTTTTCACGATTGCTCATACCTTAACCTCTG
CCCACGACCGGATCCTCCCTTCCCGCCGCCTGCCCCTCTACCACGCCCTC
CTTCGCTCACTGGGTGATTCCCGTCTGGCGTTCCTGCAATTCCTCCTTCT
CCTCCAGCACTGTGCAGCCCCGAATACGGCGCGCAAGGGCGAGGAGGAGG
ACGGGACGGAGGCCCTGCTGGGTTTGACGGAGGCCTTGGCGGGGAAGGTC
TCCGAGATGCAAGAGTTGTTCAGCGCCGGCGACCTGCTCGAGATGGGCCA
CGCCCTCCTACGAGTGGCTTGCGGCAACGGGGTACACGGGCAGGCAGGGT
TGTCCTCCCCGACGACACTGGCAGGCTGCGGGTGAATGGCGGCACTGAAT
AGGGAGGCTGCATTTTTCCTCCTGGATGCGCGCAATGCCCTGCCCGCGCT
GCGAAAAGCCCTGCGAGAGAGTGGGATGACCGGCTCAACCTCCCCCTCTA
CCTCCTGTCCACCCTCCTCCTCGACCAGTCCGCTTCCAGGCCTGCTTTTG
GCGCACTTGCTACGGGAAAGGACGCCTTTCAGCCATGTGGGGCAAGTCTT
GATGACCATGCTTTTCCGCGAGCCGTGGGTGCCCTCTCTGGCCCTCCTTC
CCTCCCTCCGCACCCTGGTGGATCGGATCGAGCAGGGCGGGAAGGAAGAG
GACAGGGTGGAAGAAAGCAAGGTCAGGCAACGCGCCCGGAGTTTGGTGCT
GCAGCAATTGCTCCATGCCCCTTCCTCCCCCCTGCCCTCAAGCTTGCCCT
CCCCAGGCCTCCCCCAGGGCGTGGTTGACCTCCTGCGGTCCCTCCTCTTC
AACGAGCTCCAAGGCCGCAAGAGGGGATTTACCCTCCTTCCCTCCCTCCT
CCCTCTCCTGGATCACGGCCCGGCTTTGAGCCCCAGCCTCGTTCTGACCT
TGGAGCAGGCGTCTTCGGAATGGGCTAAAGACTGTTTGCCAGGGGAGGAA
CGGCTGCGGTGGTGGGAGTCCGTCTTCCAAGTCCTTGTTGAGGCGGAGGA
AGGAGGGGAAGGAGGGGGGGAGGGGGGGGAGGATGAAGTATCTGTACAGG
TACTTCGGACAGTGGCCTGCCGACTCTTGGATGCGGAGGAGTTCATGGAA
GTCTTTGAAGGCATGTTCTCCCTCCCAGGCGGTAGCAAGGACGTCGGCGG
CAATGAGGGTAGCCCTACCGGCGACGGTTCGCGGGGTAGCAACGGCAAGA
ATGGGAAGCGGGGTACCCCCAGGAAAAAAACGAATCCCAAATCGCCGGAG
GGTATGGAGGGGGCGAGGGCGGGGGGGAAGGAAGGCGGGAGGAAGGGAGG
GCAGGCTCAGGTGCTGGTGGCCTTGGAGCTTTTGCAAGAGTTCCGTCGTC
AAGAGGAAGCCTCGCACCACCCCGGGAAGGGCGTCAACGACCTTCACGGC
CTGCATCAATCCACGGAGACCCTGCTAGACACCGCTAAAGCTACCCGGAA
AAGCAAAGCTACCTGGTCGCGGCTCATCCCGGTTCTCCTCCGCCTGCTCC
CCCCTTCCCCTGTTTCCGACACTCGGGACCCCTCTCCCTCCTTGCCTTCA
CTTGCCTCGCAAGGGGAAGCTCACGTGGAGTTTCGGCAGCTCCTAGCTTT
GGACACTGCCTGTGATATCCTCGACGAGGAGGCCAGGGGGGAGGATGCAG
GGGAGGGCGCGGGGGAGGGCGGGGCTGACCTGGAAACGACGCCTCTCCTG
AGCCTGGTCGAGGCCACCGCCAGCCTGCACGTCCGCAGATCGGCCGTAAA
GCTTTTGGGACTCTTGGTCCGTCGCTTTCCGCGACTCCGCGCCAAAGCCT
TGGCGTATTTGTTTGATTGGATCGGAACGGATGCCCCTTGGGAGAGGGCT
CCGTCTTTTTCCCTGCTTGTCCGGGTTTTGGAGCACGTGGTGCCCGCGGC
CCTAGCTTCCTCCCCTGCGACATCGTCCGATCTTTTCACGATTGCTCATA
CCTTAACCTCTGCCCACGACCGGATCCTCCCTTCCCGCCGCCTGCCCCTC
TACCACGCCCTCCTTCGCTCACTGGGTGATTCCCGTCTGGCGTTCCTGCA
ATTCCTCCTTCTCCTCCAGCACTGTGCAGCCCCGAATACGGCGCGCAAGG
GCGAGGAGGAGGACGGGACGGAGGCCCTGCTGGGTTTGACGGAGGCCTTG
GCGGGGAAGGTCTCCGAGATGCAAGAGTTGTTCAGCGCCGGCGACCTGCT
CGAGATGGGCCACGCCCTCCTACG back to top
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