rna8530, rna8530 (mRNA) Nannochloropsis gaditana

Overview
Namerna8530
Unique Namerna8530
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2160
Alignment locationKK037249.1:181737..182357 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100153g13.4153.mrna
Orig protein idgnl|cribi|Naga_100153g13.4153
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:181737..182357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100153g13gene8268Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22179.1cds8503Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8530rna8530-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8530 ID=rna8530|Name=rna8530|organism=Nannochloropsis gaditana|type=mRNA|length=2160bp
AGTCGTTGTCATGCACGTTTCTCCAGGCTTTTCAGGAAGCTCGTGACCTT
AGCTAGATCTGGCCACTGCCGGATCATAAATAGGAGTCTTGACTTCCTTC
CCTCTCTTCATGCTGCCAAGACAAGCAACGATGCCTCCATTTTCCGGTAG
ACGGAGATCCAGAGCACTGGGACCATGTGAGCCACACCTGTGTCTCGCCT
TTTGTCTTGGTGTTTTGGTGCATCGTCCTTTTTCTCTGGCCGCCGCTGCG
AGGGATGCCCGCGTCCTCCCAGTGCCGGACGACAGGCCCACTTCAAGCCC
CTCCAAACAACCATGGCACCACCACATGCGCCCGCTTGCATTTATGCATA
AGTCTACCCATGTTCCCACGCAAATCTTAGTCTCCCAAAGGCCTGACAGG
TGCACCAGCCCTGTGTGTGTGAGCGCGACTCCCACACATGCCTCTGAACA
CCCTTCATCACAAGCACCTCCACCAAAACCTCGCAAATCTACCTGGGAAC
GGGTCTCGAAGGTCTTCAACAAAGTTCAGGACATAGCACAGTCCGACGAT
TTCCAACGGCTTGCCCGCGGTACCCGTACTTTATTGAAAGAGATCGACAT
CGAGGTCCCTACCATGGAGCAAAATCTAGGCGCGCTCCGGCGGACGTTGG
ACCGCTCCCTTGGCTCCACGCTCCTTAGCTTCGAGAAGCTTCTGCAGCAC
TATGAAAGCCGATCGCCAGAAGCGGACGTCCTTTTATCTGTGGCCCGTAA
GCGTGTCACAAAATTGGTGCGCCACGGCCTCCATCAACTCATGACCCCCA
CCGCCGTCGAATGGGCCATCTACGCCGTCAACAGCACCGCTCTCTTGGTG
GAGGAGGAAGCTGCCCGGGTATTGGCCGCACAAGAAGGCTCGGCGGAGAA
CAGCTTGGACGTTCCGAGTTTCCAAGACATGCAACGGGAAGTGATGCGAC
GCATGGTGGTGGTGGCGGAGGACGTGGAGGCCTTGGCGCAGAACGTGATC
CAGAACCGCTGGTTTCGGACCGGCTACAGCGACGAAGAACTGAAACAGTT
GGAGGCGCTCTTGCATGCCCGGGTGGTCCCTCGTTTGCTCCTGGCCGTGG
CGGCTGCGGTGTTGCATGGCTGGCGCCCTTTACAAGACCCGCTCCTGACC
CTCCTCGTGGTGGGTTTTGCCTCGGGAAGCCTGAGCAAAAGCGTGGCTGG
GAATCTTATGGAACTCTTCGAAGCTTCGTTGGTGGTGAAGGACGGGTGGG
AGGGGAGCGGGAAGGAAGGGGAGAGGATTGTCGAGTCTTTCCCGGACGTC
TGGAGGACCCGCGAGACGGCCGCTGAGATTGGCGAGGCCCTCTTCCGCCT
CTTCGAATCCGTGGAACGCCGCAGTGCCATCCGGGTTGAGGCCCGTCAGG
CCCGGGCTAGGGCGGCGGCATCGGCGGCCACTGGATCGATTGTAACGGGC
ACTGGAACCGCAGCGCTCCCTGACGAATCGAGTCCTCCAACGCACGTGGC
CATCCCCCCTACTCCCGCATCCACCTCTCCCAGCTCCTTGCCGCCGGCCC
CCACTTCTCTGCCATCTTCCTCTCACGCTCCATCGACCCCTTTGTCCGGG
GAGAAGAAATTCATGGTTGCTTCCTATGCCTTACCCAACAAACTCACCTC
TTTGTCGGGGGGCGCCGGCCCCCAGGCAGAAAGGGAGAGAGGACGGGATT
CCGTATACTACCCGGCCTTTGAGAGCACGCGTCGTGGCAAGAGACTCCGC
TACCTGGTCACGACGGTACATTTGACCCGTACATATTGGAAAACGGCCGC
GACGGCCATGCTAGGGACCATGGGATTGGTCTTCCTCGCGCGGTTGTACG
GCAGCCCTGTGGAATTGACGATTGGTGGAGATGAAAGGGTGGAGGGACGG
GAGGACAGGAGAGAAGGACGAGGGAGGAGGCGAAGGGATGAGAGAAGGGA
TGGTTTGTTGTTCAGTACACCTTTGGAAGTGCTCGAGGAGGAGTGAGAGG
AGCGCGGGCAGGGAAAGGAAGTCCATGAGAATGTAAGTGTATGTACAGAC
CCGCACATAAATTGCTTGTGTGATACAAGGCCATGAGGCTGTAATTTAAG
CATATTTGTACAAGAAAAATAATCTTTGTAACCCACGTGTTTTCACGGAG
GTAGTAAATT
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protein sequence of rna8530

>rna8530-protein ID=rna8530-protein|Name=rna8530|organism=Nannochloropsis gaditana|type=polypeptide|length=206bp
MHPSTGGGRERQEEAHRLITALMASNVPIARATYEHACYMLSLHDATDGP
AGTRGSSEPGPSSRGYKDTLRRIYGHGVAAGVLPSIGEASAPAVLELRGL
GPTLARLALVMFLETWGQIAFTKDAEASPGLSASQPASIVIITGPGRLKA
TVQQFLRRACLPSLRTQPLPYNPGRLILPLTEVQHWHERAGIARLSWEES
REDCVG
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mRNA from alignment at KK037249.1:181737..182357-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8530 ID=rna8530|Name=rna8530|organism=Nannochloropsis gaditana|type=mRNA|length=621bp|location=Sequence derived from alignment at KK037249.1:181737..182357- (Nannochloropsis gaditana)
ATGCACCCTTCCACGGGCGGGGGGAGGGAGCGACAAGAGGAAGCTCATCG
GTTGATCACGGCCTTGATGGCCTCCAACGTGCCCATTGCCCGGGCTACCT
ACGAACACGCCTGCTACATGCTGAGCCTCCATGACGCCACAGACGGCCCT
GCGGGTACCCGGGGGTCCTCTGAACCCGGGCCCTCGTCCCGCGGCTACAA
AGACACCCTGCGTCGTATTTACGGGCATGGAGTTGCGGCGGGGGTACTGC
CTTCCATTGGCGAGGCCTCTGCCCCCGCCGTCCTTGAGCTGCGCGGGCTG
GGGCCCACCCTGGCCCGGCTAGCCTTGGTCATGTTTTTGGAGACCTGGGG
CCAGATTGCCTTTACGAAGGACGCGGAAGCATCGCCAGGATTGAGTGCCT
CGCAGCCTGCCTCAATCGTTATAATAACTGGTCCTGGACGCTTAAAAGCG
ACGGTGCAGCAATTTCTGCGGAGGGCCTGCCTGCCCTCGTTGCGCACTCA
GCCCCTGCCCTACAATCCCGGTCGACTGATCTTACCATTGACAGAAGTAC
AACACTGGCATGAGCGTGCAGGTATAGCCCGACTTTCATGGGAGGAAAGC
AGGGAGGATTGTGTCGGATAA
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Coding sequence (CDS) from alignment at KK037249.1:181737..182357-

>rna8530 ID=rna8530|Name=rna8530|organism=Nannochloropsis gaditana|type=CDS|length=621bp|location=Sequence derived from alignment at KK037249.1:181737..182357- (Nannochloropsis gaditana)
ATGCACCCTTCCACGGGCGGGGGGAGGGAGCGACAAGAGGAAGCTCATCG
GTTGATCACGGCCTTGATGGCCTCCAACGTGCCCATTGCCCGGGCTACCT
ACGAACACGCCTGCTACATGCTGAGCCTCCATGACGCCACAGACGGCCCT
GCGGGTACCCGGGGGTCCTCTGAACCCGGGCCCTCGTCCCGCGGCTACAA
AGACACCCTGCGTCGTATTTACGGGCATGGAGTTGCGGCGGGGGTACTGC
CTTCCATTGGCGAGGCCTCTGCCCCCGCCGTCCTTGAGCTGCGCGGGCTG
GGGCCCACCCTGGCCCGGCTAGCCTTGGTCATGTTTTTGGAGACCTGGGG
CCAGATTGCCTTTACGAAGGACGCGGAAGCATCGCCAGGATTGAGTGCCT
CGCAGCCTGCCTCAATCGTTATAATAACTGGTCCTGGACGCTTAAAAGCG
ACGGTGCAGCAATTTCTGCGGAGGGCCTGCCTGCCCTCGTTGCGCACTCA
GCCCCTGCCCTACAATCCCGGTCGACTGATCTTACCATTGACAGAAGTAC
AACACTGGCATGAGCGTGCAGGTATAGCCCGACTTTCATGGGAGGAAAGC
AGGGAGGATTGTGTCGGATAA
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Synonyms
Publications