rna8522, rna8522 (mRNA) Nannochloropsis gaditana

Overview
Namerna8522
Unique Namerna8522
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length282
Alignment locationKK037249.1:156734..158142 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100153g5.4151.mrna
Orig protein idgnl|cribi|Naga_100153g5.4151
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:156734..158142 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100153g5gene8260Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22177.1cds8495Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8522rna8522-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8522 ID=rna8522|Name=rna8522|organism=Nannochloropsis gaditana|type=mRNA|length=282bp
ATGAAGCCAAGTTATTTGCAGCAAGGTGTAGTAATCACTGCATTTTTGCA
TTTTTGTCACCTACTTGACAATTTTATACACGTTCACGGCATTCAATGCG
CCAATAAGCAATGGCTTGACGCTGTTACACTCCTAGATACTCTGCCCAGA
CGTCTCCCCGAAACTGCATGGGATGATTTTCTTTTAGATAGGGTAGGACG
GTTTTGGAAGGACGGGCGGACTATTTGCTCGTTAAGACTCAGCAACGAAG
AGGGGCGACCTCACGAGGAAGATACTCGCTAG
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protein sequence of rna8522

>rna8522-protein ID=rna8522-protein|Name=rna8522|organism=Nannochloropsis gaditana|type=polypeptide|length=373bp
MVARLDTLLQGRTSLYRACRRRPTDLLSSTPSWITMADFVRDIVTRDTPP
GGPPPPSLAQTSPVPARTDGPESASSPSLQASCEASSSQTTAGREEGKEA
GRRGGRECPGKKRVGGSEAGGEEEKSWEGAGVNSRRSKRIARGGDEDGNR
IGGNGDGGSWERGWEGKNVVGGEAPALEEAREVGKEGGEEVWVGGSLGGP
GEGGQEGGTQVSESRTAWSEGEAEEEGRKESKEGRVKDTAEQGRVGKEGS
VSDRCFSSRGKALPFRLAGAEGSDLAAGQVSEQREERVDTEASRDLGGIG
RDVQGKGHQNRDDKGEGRERGGEVQVFDEAEAVDGLDTAGLSTGDMICPT
KIVSCEEERAGAPEDSEGGTPSQ
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mRNA from alignment at KK037249.1:156734..158142-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8522 ID=rna8522|Name=rna8522|organism=Nannochloropsis gaditana|type=mRNA|length=1409bp|location=Sequence derived from alignment at KK037249.1:156734..158142- (Nannochloropsis gaditana)
CTCCATGCAGCAATCATGCCCCCTTTTAACTTTCCCGCCGCACGTTCCCT
TAGCTTCAAACATCTACTCGTTGCCTGAGTGAACACCCCTTCCCTCCATC
CCTCCCTCTCCTCCCTCCAGGTCCCTCCTCTGCGTCGAGATGGTGGCCCG
TCTCGACACCTTGTTGCAGGGCCGCACGTCACTCTACCGCGCCTGCCGTC
GACGCCCTACCGATCTCCTTTCCTCCACCCCTTCCTGGATCACCATGGCC
GACTTTGTGCGGGACATTGTCACGCGTGATACCCCCCCCGGGGGCCCTCC
CCCTCCGTCCCTCGCCCAAACCTCTCCCGTGCCCGCCCGCACCGATGGCC
CAGAAAGTGCTTCTTCTCCGTCGCTGCAGGCGTCCTGCGAGGCGTCATCG
AGCCAAACCACGGCAGGAAGGGAGGAAGGGAAGGAAGCAGGGAGGAGAGG
CGGGAGGGAATGTCCAGGGAAGAAGCGTGTAGGAGGGTCGGAGGCGGGAG
GGGAGGAGGAGAAGAGCTGGGAGGGAGCCGGCGTGAACTCGCGCAGGAGC
AAGAGAATAGCCAGGGGAGGTGATGAGGATGGCAACCGAATAGGTGGAAA
TGGAGACGGTGGGTCGTGGGAGAGGGGGTGGGAGGGGAAGAATGTGGTCG
GAGGAGAGGCTCCAGCGTTGGAGGAAGCGAGGGAGGTCGGGAAGGAGGGA
GGGGAGGAAGTCTGGGTTGGGGGGAGTCTCGGGGGCCCGGGGGAGGGAGG
GCAGGAAGGAGGGACTCAGGTCTCCGAGTCTCGGACGGCGTGGAGCGAGG
GCGAGGCGGAGGAGGAGGGAAGAAAAGAAAGCAAAGAGGGACGGGTCAAG
GACACAGCCGAGCAAGGACGTGTGGGCAAGGAGGGATCAGTCTCGGATCG
GTGTTTCTCGTCCCGTGGGAAGGCCCTTCCCTTCCGCTTGGCTGGTGCCG
AGGGTAGCGACCTAGCCGCCGGTCAAGTGAGTGAACAAAGGGAGGAGAGG
GTGGACACGGAGGCGTCGCGCGACCTGGGCGGCATTGGGAGGGACGTGCA
GGGGAAGGGCCATCAGAACAGGGACGATAAGGGAGAAGGCAGGGAAAGGG
GGGGTGAGGTACAGGTTTTCGACGAAGCTGAAGCGGTTGATGGGCTCGAT
ACGGCGGGTCTGAGCACTGGGGATATGATATGTCCCACGAAAATAGTGTC
GTGCGAAGAAGAGAGGGCTGGGGCGCCCGAGGACAGTGAGGGGGGCACCC
CTTCACAGTGAGAAGGGGACCTCGGTAGGTGAGTTTAGACGAAGGAAAAA
ATGCGTGAGTTCGAAGCAACGTGGGCACCTCACGCGTCAATGTTTGTCTC
CTTGTTCATTTGGCCACGAATGGTAGATTTCTCCCTTTATGCAATATTAC
TGAGTCTTT
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Coding sequence (CDS) from alignment at KK037249.1:156734..158142-

>rna8522 ID=rna8522|Name=rna8522|organism=Nannochloropsis gaditana|type=CDS|length=1122bp|location=Sequence derived from alignment at KK037249.1:156734..158142- (Nannochloropsis gaditana)
ATGGTGGCCCGTCTCGACACCTTGTTGCAGGGCCGCACGTCACTCTACCG
CGCCTGCCGTCGACGCCCTACCGATCTCCTTTCCTCCACCCCTTCCTGGA
TCACCATGGCCGACTTTGTGCGGGACATTGTCACGCGTGATACCCCCCCC
GGGGGCCCTCCCCCTCCGTCCCTCGCCCAAACCTCTCCCGTGCCCGCCCG
CACCGATGGCCCAGAAAGTGCTTCTTCTCCGTCGCTGCAGGCGTCCTGCG
AGGCGTCATCGAGCCAAACCACGGCAGGAAGGGAGGAAGGGAAGGAAGCA
GGGAGGAGAGGCGGGAGGGAATGTCCAGGGAAGAAGCGTGTAGGAGGGTC
GGAGGCGGGAGGGGAGGAGGAGAAGAGCTGGGAGGGAGCCGGCGTGAACT
CGCGCAGGAGCAAGAGAATAGCCAGGGGAGGTGATGAGGATGGCAACCGA
ATAGGTGGAAATGGAGACGGTGGGTCGTGGGAGAGGGGGTGGGAGGGGAA
GAATGTGGTCGGAGGAGAGGCTCCAGCGTTGGAGGAAGCGAGGGAGGTCG
GGAAGGAGGGAGGGGAGGAAGTCTGGGTTGGGGGGAGTCTCGGGGGCCCG
GGGGAGGGAGGGCAGGAAGGAGGGACTCAGGTCTCCGAGTCTCGGACGGC
GTGGAGCGAGGGCGAGGCGGAGGAGGAGGGAAGAAAAGAAAGCAAAGAGG
GACGGGTCAAGGACACAGCCGAGCAAGGACGTGTGGGCAAGGAGGGATCA
GTCTCGGATCGGTGTTTCTCGTCCCGTGGGAAGGCCCTTCCCTTCCGCTT
GGCTGGTGCCGAGGGTAGCGACCTAGCCGCCGGTCAAGTGAGTGAACAAA
GGGAGGAGAGGGTGGACACGGAGGCGTCGCGCGACCTGGGCGGCATTGGG
AGGGACGTGCAGGGGAAGGGCCATCAGAACAGGGACGATAAGGGAGAAGG
CAGGGAAAGGGGGGGTGAGGTACAGGTTTTCGACGAAGCTGAAGCGGTTG
ATGGGCTCGATACGGCGGGTCTGAGCACTGGGGATATGATATGTCCCACG
AAAATAGTGTCGTGCGAAGAAGAGAGGGCTGGGGCGCCCGAGGACAGTGA
GGGGGGCACCCCTTCACAGTGA
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Synonyms
Publications