rna8511, rna8511 (mRNA) Nannochloropsis gaditana

Overview
Namerna8511
Unique Namerna8511
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1208
Alignment locationKK037249.1:130845..131196 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100540g1.16.mrna
Orig protein idgnl|cribi|Naga_100540g1.16
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:130845..131196 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100540g1gene8249Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8511rna8511-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22192.1cds8484Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8511 ID=rna8511|Name=rna8511|organism=Nannochloropsis gaditana|type=mRNA|length=1208bp
GTCCTCCCCTTCGTTGTCTTCTTCTTGGGCGGAGCGCCCACCATCTTGTC
CTTGTGGTTCGTCAATATTCGCAGACGTCGTCGTGAGATTTGTGCACTGC
TCTGGATGAACGTGCCTCGTTTTCAAGGACGAGACTGCAATGGTCATTAA
AAGAGCGTGGGGAGCTCCACCTCATGACCCTTTTTCTCCTCCCTCCCCTC
CATTCCCCTAAGGCAGGATGGTACGACACAACAACGTCATCCCGAACCAG
CACTTCCATAAGGACTGGCAAACTCGGGTCAAGACCTGGTTTGATCAGCC
CGCCAAGAAGAAGGCCCGTCGCCTGGCTCGGAAAGCCAAGGCCGCAGCCC
TTGCTCCCCGGCCCACACAACTCCTCCGTCCGGTGGTGCACGCGCCCACG
CAGCGGTACAATCACAAGACGCGCTTGGGCAGGGGTTTCACCATGCAGGA
GCTGAAGGAAGTTGGCTTGACCAAGAAGTACGCCAAGTCCGTAGGCATCG
CCGTCGACCACCGTCGCACGAACCTGTCGGTCGAGTCGTTGCAAGCCAAC
GTGCAGCGACTGAAAGAGTACAAATCCAAACTCATTGTCTTCCCCATGGG
CCGGGTCAAGAAGCCCAAGGCGGGCGACAGCAGCACGGCGGAATGCCGGG
CGGCGGTGCAAGCCACTGGCACGGTCCTACCCTTGCCCACGGGGAAGAAG
GCGGTTGAGTTTGTCTCAGTATCGGAGGAATTGAAGAATTTCCGAGCCCA
TACCGCCCTGAGGGTGGCCCGCAACGACCAGAAATTGGATGGAATTAGGC
GAGGGAAGGCGTTGAAGGCGGGGAAGGGGGATGCGTAAAGAGACGTAAGG
AGAGGGGGCCAGACAACCGGCATGTGAGGCAGAAAGAGGGAGGGGGGAGG
GGAGCAAACGAATCGGGGGAGCAGTCTCGAGAACATTTGGTTCTCGACGG
CTGCATAGCGCAGCCGATTGCTCAGTGGGTGTGAAGCATCGTGGGCCACT
TATTGATTCATCGCGGACCTCGAACCCCTTCCTCCTTTTGGAAAAGGAAA
AGAAGCACTACAAGAGGGCTTTTCATTGTGTGTGTAGATTTAATTACTCG
GTTATTTCTTGCTTCTACATAATACACGGAACGGTTACTTGGAGACCACC
TTCACACGACTCTTTACTTGCCTTATTTACCCGGCAACATATATGTGACG
ATTCAAGC
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protein sequence of rna8511

>rna8511-protein ID=rna8511-protein|Name=rna8511|organism=Nannochloropsis gaditana|type=polypeptide|length=80bp
MWTPAQKSSKSKGSTSASGGHAVGERAHPMLPPDIPSYSLSESQPSSSIG
STPSSTHNNNVQTLESRVRKLAVRVIEGTI
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mRNA from alignment at KK037249.1:130845..131196+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8511 ID=rna8511|Name=rna8511|organism=Nannochloropsis gaditana|type=mRNA|length=352bp|location=Sequence derived from alignment at KK037249.1:130845..131196+ (Nannochloropsis gaditana)
GTGCGAAGCTCGATGATTATACGATGATTGGCTTCGAACGCCATTTTTGT
TGGTCGTAGGCTTAATAACACAAATCTGGAGATGTGGACACCGGCGCAAA
AGTCTAGCAAAAGCAAAGGCAGCACGAGTGCGTCCGGCGGACACGCAGTA
GGCGAAAGGGCCCATCCCATGCTGCCTCCTGATATCCCGTCTTATTCCTT
ATCGGAGAGTCAACCCTCGTCTTCAATCGGGTCGACCCCATCATCCACTC
ACAACAACAATGTACAAACTTTGGAGTCACGGGTGCGGAAGTTGGCGGTA
CGTGTGATAGAAGGGACAATTTAGGGTTTTCTTTCTTCAAcaccgttcct
cc
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Coding sequence (CDS) from alignment at KK037249.1:130845..131196+

>rna8511 ID=rna8511|Name=rna8511|organism=Nannochloropsis gaditana|type=CDS|length=243bp|location=Sequence derived from alignment at KK037249.1:130845..131196+ (Nannochloropsis gaditana)
ATGTGGACACCGGCGCAAAAGTCTAGCAAAAGCAAAGGCAGCACGAGTGC
GTCCGGCGGACACGCAGTAGGCGAAAGGGCCCATCCCATGCTGCCTCCTG
ATATCCCGTCTTATTCCTTATCGGAGAGTCAACCCTCGTCTTCAATCGGG
TCGACCCCATCATCCACTCACAACAACAATGTACAAACTTTGGAGTCACG
GGTGCGGAAGTTGGCGGTACGTGTGATAGAAGGGACAATTTAG
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Synonyms
Publications