rna8507, rna8507 (mRNA) Nannochloropsis gaditana

Overview
Namerna8507
Unique Namerna8507
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length381
Alignment locationKK037249.1:124796..125472 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100540g5.14.mrna
Orig protein idgnl|cribi|Naga_100540g5.14
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:124796..125472 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100540g5gene8245Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8507rna8507-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22190.1cds8480Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8507 ID=rna8507|Name=rna8507|organism=Nannochloropsis gaditana|type=mRNA|length=381bp
ATGCCGCACACGACGAGCTCATTTCGGCCGAGGAGATCGTGTGCTCGGGG
CGCATGTCCCAAGAGGATTGGGAGCTCTGCGCTTCCTACGCCCATGCCCT
CTTTGCCTTTGGCCAGAAGGTTGCCTCCGCGCGAGGACTCATTCTGGTCG
ACACCAAGTACGAGTTTGGCAAGGTACACGCCTCCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCTTCGTGTCCTTCCTCCTCTTTTCACCAG
ATTTCAGTCCAGCACGGACGCTCAAGTCGCCTGCGTCCTGTCCTTCCTCT
GTTGTTTCCCCCCTCCTCCCCTTCCCTTCCTCCTCCCCTTCCATTCCTCC
GCCCCCTGCCAGACTGCGGACGGGCAAGTGA
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protein sequence of rna8507

>rna8507-protein ID=rna8507-protein|Name=rna8507|organism=Nannochloropsis gaditana|type=polypeptide|length=174bp
MDMVERGRGNKRMGTDRKQICAFHMSIVPLAGASRVGWRMLRKTMCAYEQ
YSTGPHPMRHISQITCFSVHTTTEGRASGIIGSRSQARTAREGNIASKVK
GLKMCDDGTATIMSKWVSTARRWTMMIICFNLHCHMHGVPLVVLVYKTSK
DSTMKCVKVASALSEPIGKMQGFM
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mRNA from alignment at KK037249.1:124796..125472-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8507 ID=rna8507|Name=rna8507|organism=Nannochloropsis gaditana|type=mRNA|length=677bp|location=Sequence derived from alignment at KK037249.1:124796..125472- (Nannochloropsis gaditana)
ATGGATATGGTGGAAAGGGGAAGGGGAAATAAAAGAATGGGGACGGACAG
GAAGCAAATCTGTGCATTCCATATGTCAATAGTGTAAATTTGCGGTGCAT
GTGCGTCGGGCCGGAACGGTCCTAAAGCCCTTTGGCTGGCGCGTCGAGGG
TAGGATGGCGCATGCTTCGCAAGACAATGTGTGCATATGAACAATATTCA
ACGGGTCCTCATCCCATGTTAAGCCAGGCCTAAGAGCGAATCTAAGGTCC
TAGGGCAAATGAAAAGCCGTAATGCGGGCTCAGGCGTCACATAAGTCAGA
TTACTTGTTTCAGTGTGCATACGACGACTGAGGGAAGGGCGAGCGGCATA
ATTGGTTCCAGAAGCCAAGCCCGGACTGCGAGAGAGGGGAACATTGCATC
AAAAGTGAAAGGCCTCAAAATGTGTGATGTGTGTGTGTAAATACGGGGCC
GACACAACCTCGGCATCAAGGACGGGACGGCAACAATCATGAGCAAGTGG
GTGTCAACAGCCAGACGATGGACGATGATGATTATTTGTTTCAACCTTCA
CTGTCACATGCATGGGGTACCCTTGGTGGTACTGGTTTATAAAACGAGCA
AAGACAGTACGATGAAATGCGTGAAGGTGGCGAGTGCATTGAGTGAACCG
ATCGGCAAGATGCAAGGCTTCATGTAG
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Coding sequence (CDS) from alignment at KK037249.1:124796..125472-

>rna8507 ID=rna8507|Name=rna8507|organism=Nannochloropsis gaditana|type=CDS|length=2100bp|location=Sequence derived from alignment at KK037249.1:124796..125472- (Nannochloropsis gaditana)
GACGGGACGGCAACAATCATGAGCAAGTGGGTGTCAACAGCCAGACGATG
GACGATGATGATTATTTGTTTCAACCTTCACTGTCACATGCATGGGGTAC
CCTTGGTGGTACTGGTTTATAAAACGAGCAAAGACAGTACGATGAAATGC
GTGAAGGTGGCGAGTGCATTGAGTGAACCGATCGGCAAGATGCAAGGCTT
CATGTAGGCGTCACATAAGTCAGATTACTTGTTTCAGTGTGCATACGACG
ACTGAGGGAAGGGCGAGCGGCATAATTGGTTCCAGAAGCCAAGCCCGGAC
TGCGAGAGAGGGGAACATTGCATCAAAAGTGAAAGGCCTCAAAATGTGTG
ATCCCTTTGGCTGGCGCGTCGAGGGTAGGATGGCGCATGCTTCGCAAGAC
AATGTGTGCATATGAACAATATTCAACGGGTCCTCATCCCATATGGATAT
GGTGGAAAGGGGAAGGGGAAATAAAAGAATGGGGACGGACAGGAAGCAAA
TCTGTGCATTCCATATGTCAATAGTGACGGGACGGCAACAATCATGAGCA
AGTGGGTGTCAACAGCCAGACGATGGACGATGATGATTATTTGTTTCAAC
CTTCACTGTCACATGCATGGGGTACCCTTGGTGGTACTGGTTTATAAAAC
GAGCAAAGACAGTACGATGAAATGCGTGAAGGTGGCGAGTGCATTGAGTG
AACCGATCGGCAAGATGCAAGGCTTCATGTAGGCGTCACATAAGTCAGAT
TACTTGTTTCAGTGTGCATACGACGACTGAGGGAAGGGCGAGCGGCATAA
TTGGTTCCAGAAGCCAAGCCCGGACTGCGAGAGAGGGGAACATTGCATCA
AAAGTGAAAGGCCTCAAAATGTGTGATCCCTTTGGCTGGCGCGTCGAGGG
TAGGATGGCGCATGCTTCGCAAGACAATGTGTGCATATGAACAATATTCA
ACGGGTCCTCATCCCATATGGATATGGTGGAAAGGGGAAGGGGAAATAAA
AGAATGGGGACGGACAGGAAGCAAATCTGTGCATTCCATATGTCAATAGT
GACGGGACGGCAACAATCATGAGCAAGTGGGTGTCAACAGCCAGACGATG
GACGATGATGATTATTTGTTTCAACCTTCACTGTCACATGCATGGGGTAC
CCTTGGTGGTACTGGTTTATAAAACGAGCAAAGACAGTACGATGAAATGC
GTGAAGGTGGCGAGTGCATTGAGTGAACCGATCGGCAAGATGCAAGGCTT
CATGTAGGCGTCACATAAGTCAGATTACTTGTTTCAGTGTGCATACGACG
ACTGAGGGAAGGGCGAGCGGCATAATTGGTTCCAGAAGCCAAGCCCGGAC
TGCGAGAGAGGGGAACATTGCATCAAAAGTGAAAGGCCTCAAAATGTGTG
ATCCCTTTGGCTGGCGCGTCGAGGGTAGGATGGCGCATGCTTCGCAAGAC
AATGTGTGCATATGAACAATATTCAACGGGTCCTCATCCCATATGGATAT
GGTGGAAAGGGGAAGGGGAAATAAAAGAATGGGGACGGACAGGAAGCAAA
TCTGTGCATTCCATATGTCAATAGTGACGGGACGGCAACAATCATGAGCA
AGTGGGTGTCAACAGCCAGACGATGGACGATGATGATTATTTGTTTCAAC
CTTCACTGTCACATGCATGGGGTACCCTTGGTGGTACTGGTTTATAAAAC
GAGCAAAGACAGTACGATGAAATGCGTGAAGGTGGCGAGTGCATTGAGTG
AACCGATCGGCAAGATGCAAGGCTTCATGTAGGCGTCACATAAGTCAGAT
TACTTGTTTCAGTGTGCATACGACGACTGAGGGAAGGGCGAGCGGCATAA
TTGGTTCCAGAAGCCAAGCCCGGACTGCGAGAGAGGGGAACATTGCATCA
AAAGTGAAAGGCCTCAAAATGTGTGATCCCTTTGGCTGGCGCGTCGAGGG
TAGGATGGCGCATGCTTCGCAAGACAATGTGTGCATATGAACAATATTCA
ACGGGTCCTCATCCCATATGGATATGGTGGAAAGGGGAAGGGGAAATAAA
AGAATGGGGACGGACAGGAAGCAAATCTGTGCATTCCATATGTCAATAGT
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Synonyms
Publications