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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100504g4.6932.mrna |
| Orig protein id | gnl|cribi|Naga_100504g4.6932 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:670035..671433 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8433 ID=rna8433|Name=rna8433|organism=Nannochloropsis gaditana|type=mRNA|length=1622bp
GACTTCTCCATGTCTTACCTGCTGTCTTCAATTTTTATACCCTCCCACGT
TGTCCACTTCAGAAGCCGACATCAGCCTCTTTATGTGTGGCCGGGCCCGT
TGTTCTTGCTCAATATCTGCTGTGGCCACCACATACGGCGTTCCTGGAGG
GCGCATATACAGAGCAGATCGTTTTCGGCCCCGGCATAACCTGCACCCAG
GACATACTTCACCAGTTATTGTCAGGGCGGGAGGTTACGAACGCCACTGC
CGACGACAGCCCACGACAGGGAAGGCGAAAGGAGGAGACACATCGCAGAC
TCGAGATGCATGCCAAGAAAAGAAGGGAGAAGACGGGGACCTGGGGGAGA
GGGCAGTGGTGGTGATGCATTGGGGCCTGATTCCATCATGGCACAAGGAA
GGGGAGAAGCTGGATTTTTTCCGCGCGTTTAATGCCCGTTCAGAGACGGT
GGCCGTGAAGCCGATGTTCCGTCGGCTGGCCGATACCAAGCGTTGCCTCG
TCTGCGTGGAGGGCTTCTACGAGTGGAAAAAGGACAAGAAAGGGCAAAAG
CAGCCTTTCTACTGCCACTCCCGCGACCCCTCCCACCCTCTCCTCTCCCT
TGCCGGGCTCTACGACGTTTGGTACCGGCCTCCTCGGTCAGACGAGAAGG
TAGAGGGCGCGGTGGAGGACGAGGTCTTCTTCTCCTTCACCATCCTGACC
ACCGAGGCGGCCTCGTCGTTTGCCTGGCTCCATGACCGCATGCCCCTGAT
ATTGCAGAGCAAGGAGGAGGAGGAGGCGTGGCTTGAGGGAGGGGCCGAGG
GCGGGCCGCGAATCGCCGAGATCTTGCCGAAATTGTGGGGCCAGAAAGGA
GAAGGCAAAGGGAAACAAGGTGGGAGGGAAGTGCCGGAGTTGATCTGTGA
GCCTGTGAGCAAGCGGATGAACAGCATGGCGTACGAAGGGGAGGACTGTG
CAGTGCCCATTGTTTTGGAAGAAGAAGGGAAGGAGGGCGGGGGGAAGGGG
ACTTTGGATGTTTTCTTCGGGGGAAGGACGGGTCGGGCAGCAGTTAAGGA
GGATCACGGGAAGGGGAGGGAGGAAGGAGAGGGGGGGAAACCGGCGAAGA
CCCTAGACGCCTCGCGCAAAGCAAAGAAGGAGGAAGGAGCAGCGGGGGAG
GACGAGGTGCAGGTGTTGACGCCAAGTTGGTTGGAGGAAGGGAGGGGCGG
GAATGTAGGAGACAGTGCGAAAAAACCTCGAATGGAGCAGGCTGTAGAGA
GACGTGGTGCGGCACGAGGAGGGGAGAAAGCAAGCAGGAAAGGAGGGGCT
ATAAACGACGTAACGAGTGCTGAGAAGCGACAGAGGACCATGCAGAGCTT
TTTCCCCCTGTCCAAATGAGGCCGGAGGTGCTACCTGGGGACGAGGAGAG
AAGTTGAAGGCGGAACCCTGGATAAAGGGCGTCGATAGCGACAGGGGGAG
GAGAGGTGGCCTTCCATGTGAAAAAGGAGGGAGACGGGGGTGAGGGAAAT
CAGAAGAAAGGAGAATTCGCGTGCTTGAACAAGTAAAGAGCGTGTACAGG
CATGTTTAAAGGCTGCGCGAGCGTTAGAGACTCTGGAATTAAAGACGTTA
AAAGACTTTCTGATTGCTTTTA back to topprotein sequence of rna8433 >rna8433-protein ID=rna8433-protein|Name=rna8433|organism=Nannochloropsis gaditana|type=polypeptide|length=153bp
MHRATMAGIAGMLLKACMVTTTTAFLVSPGPRVHERSSSRCTTHLRAAAP
IAPAGSFAASLEALHDATITTLTEALKVEPTDYPASMELDSYAGKSGVQG
SIAGYKGNVRLVWTGEGKMMRENGVEGGASIGATWPSGWGLSPWCLTWSS
RSS back to topmRNA from alignment at KK037248.1:670035..671433+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8433 ID=rna8433|Name=rna8433|organism=Nannochloropsis gaditana|type=mRNA|length=1399bp|location=Sequence derived from alignment at KK037248.1:670035..671433+ (Nannochloropsis gaditana)
AAAATAAGGTAGAGCTGTCCTTTGATGGGAGATCCATATTGAGTGTCCAC
GGATAGAATAGTTGTGTAGAGTGCGACATCTTTGGGCCTGTCAACTCATT
GCAGACAAAGTTTGCCCTGcaaccaacctccccaccccccttaTCCATTA
AATGCATTAAACAAGATGCACCGCGCCACCATGGCCGGCATCGCTGGGAT
GCTTCTGAAAGCCTGCATGGTTACTACAACGACGGCCTTTCTCGTGTCTC
CCGGTCCACGGGTGCACGAACGTTCCTCGTCACGTTGTACCACTCATCTG
CGTGCTGCCGCCCCGATCGCTCCCGCGGGCTCATTTGCGGCCTCTCTGGA
GGCTCTCCACGACGCGACTATCACGACACTTACAGAAGCGCTCAAGGTAT
GTGCATCGGTAATTTTACCCCTGTGACACGACGCTGATGGGGGAAGAAAT
CCCTTGCTCAGGTGGAGCCAACCGACTACCCGGCCTCCATGGAGCTGGAC
TCCTACGCGGGAAAAAGCGGTGTTCAGGGCAGCATCGCAGGGTACAAGGG
CAATGTTCGGCTGGTTTGGactggggaggggaaaatgatGCGCGAGAatg
gggtggaagggggggcgtcTATCGGAGCGACCTGGCCATCTGGGTGGGGC
CTCTCACCTTGGTGCCTCACTTGGTCTTCTCGCTCGAGctgagcgagggg
gagagaggggaggaggaaatcaagcTGCTGCTTGACTACGTGCCCCGGGA
GGATATCCAATACACGACGGGGAACAACCATCTGATGGATTATTTCGCCG
GGCCCGCgcaggaggtgaggggagTGCTTCCCtaccccctcttctttccc
cctcgacaGACTACACTCATGCCCTTACCCTGCACACAcaggcggccgcc
gccgctgcctccgaCAGCTTCGCCCTGCGTCCACgggtcctcccctcctt
ctactcccgcgtcctcctctccccgtccgccctcgccctcgccctccccg
ccacgccCCAGGGCCTGGATCGGGCGCGGGCTTGGACAGAAGGACACGTA
CAGCGCTGGCTGGGCTGGTGCGAGGGCGCCAAGGAGGTGGATAGGATGAA
AcgcggtctcctcctctcccgggacAACGGCGTGCGGCGGAcctgggtgg
aggggacggcGGGGAGTCTGGAGGGTTtttgtggggggggagggagggag
ggggggcgctGGCAAAGCAAGCGGCGATCGCCATGAGTGGGCCACAGCAG
GAGGCTTACGTGGGAGGGTTCAGTTGAGGGctgagaggggggaggcgggg
aggatgagggtgaGAGCTGGTGGTTCCCCCCCAGGCCATGGtaaggagga
catggggaGATGAAAGGCAAGATGCATCAGGTCAACTCTTTTTTGCCGA back to topCoding sequence (CDS) from alignment at KK037248.1:670035..671433+ >rna8433 ID=rna8433|Name=rna8433|organism=Nannochloropsis gaditana|type=CDS|length=924bp|location=Sequence derived from alignment at KK037248.1:670035..671433+ (Nannochloropsis gaditana)
ATGCACCGCGCCACCATGGCCGGCATCGCTGGGATGCTTCTGAAAGCCTG
CATGGTTACTACAACGACGGCCTTTCTCGTGTCTCCCGGTCCACGGGTGC
ACGAACGTTCCTCGTCACGTTGTACCACTCATCTGCGTGCTGCCGCCCCG
ATCGCTCCCGCGGGCTCATTTGCGGCCTCTCTGGAGGCTCTCCACGACGC
GACTATCACGACACTTACAGAAGCGCTCAAGGTGGAGCCAACCGACTACC
CGGCCTCCATGGAGCTGGACTCCTACGCGGGAAAAAGCGGTGTTCAGGGC
AGCATCGCAGGGTACAAGGGCAATGTTCGGCTGGTTTGGactggggaggg
gaaaatgatGCGCGAGAatggggtggaagggggggcgtcTATCGGAGCGA
CCTGGCCATCTGGGTGGGGCCTCTCACCTTGGTGCCTCACTTGGTCTTCT
CGCTCGAGctgaATGCACCGCGCCACCATGGCCGGCATCGCTGGGATGCT
TCTGAAAGCCTGCATGGTTACTACAACGACGGCCTTTCTCGTGTCTCCCG
GTCCACGGGTGCACGAACGTTCCTCGTCACGTTGTACCACTCATCTGCGT
GCTGCCGCCCCGATCGCTCCCGCGGGCTCATTTGCGGCCTCTCTGGAGGC
TCTCCACGACGCGACTATCACGACACTTACAGAAGCGCTCAAGGTGGAGC
CAACCGACTACCCGGCCTCCATGGAGCTGGACTCCTACGCGGGAAAAAGC
GGTGTTCAGGGCAGCATCGCAGGGTACAAGGGCAATGTTCGGCTGGTTTG
GactggggaggggaaaatgatGCGCGAGAatggggtggaagggggggcgt
cTATCGGAGCGACCTGGCCATCTGGGTGGGGCCTCTCACCTTGGTGCCTC
ACTTGGTCTTCTCGCTCGAGctga back to top
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