|
|
Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF159 |
| Orig transcript id | gnl|cribi|Naga_100504g5.6930.mrna |
| Orig protein id | gnl|cribi|Naga_100504g5.6930 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:667827..669817 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8432 ID=rna8432|Name=rna8432|organism=Nannochloropsis gaditana|type=mRNA|length=1266bp
TCCCTTCCGGTTCATGTCCCTCGTCCAAGTCGACATCACGGATCTAAAGC
CCGCGCCCCAGCAGGGACAGGCCCACCACGGCCATCATCCGGGCACCCGC
CACCTGGATCTCTATGCTATCATGCGCTTGCGACGTCGGTCGATATACCA
GCAGACCAATAAGGCGCCACATCCCCCGCTCACAGCCAAGAATCGAACCG
CCGACACGGTCATGACGGACAACGCGCGGGCGATCCTCAGCTTCCCCTCG
CCGCCTCCTCCTTCCTCATCGGGGGAGGACGGGGCTACCTCCCAGGTTCC
GGAGCTACCGCAGCATTTCAACGAAGAGCCCTCCATGACCACGGCGCTGA
ATGCCACCTTTCGTTTCGCCTTGCCGGACGAGTGCCTCCCCTCCCGCGGA
CTGGAAGCGGTGGAGTGGCTGGGGAAAGGCCCGCCTCGGGTCATCCACGT
TCTGCTGTACGAACGCCGGACGATCATGGCGGACTCCCTGATAGGGGAAG
TGGAAGTGCCGCTCTCCGCGCTCACGGAGGAGGAATTCATCGACACGTGG
CTGCCCATAAGCACCCGGGACCACCACCACCCTGCCCCTTCCTCCACCAC
GCCCTCCCTCCCGCCCTCCCACGCGGCTGTCTTCCAGAACCATCATCTCT
ACGGGGGCAGTCAGGCGTGGACAGCGGGCGCAAAAGGCCCTCCAGTCGTG
CCGGTGCCTCAGGAAGGAGGGAAGGAGGGTGGGACGCAGACGGTGTGGAT
GGTGAGGGTGCAAGTCCTCCTGTCCTTCTTGTTGATGTGCGCCAAGCAGG
CGGAGCGGGGGGAGAGGGAGGGGGAGGAGATGGGAGAGGAGGAGGATGAG
GAGGAGGACGAGGAGGGGGAGGACGAGGAGGCGGAGCCGAACGAGCACCA
GGTGCGGGCAACGTCGATGATGGATGACCTGTGAGGAGGGAGAGAGATCG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGAAGAGAGGGAGGGAGCA
GAGACCGCAGGGCGAAGAATACTAGCGAGTGCCAGGGTGGCGGGCGAGGA
AATCGGAGAAATTTATGGCGAGGAAATGAGGAGCCTGGTGAGACGCGCAA
AGAAAGCAGGGTTAGCACGCAGAGGTATATTGCGTGAATTTTGACGGCCC
ACGCGCATTGTGTAAGGGTTCTGGTAGGAACGCAGGCGGGAATAGGAAAC
ACCAGTTCGGGTTGGGGGTTTATTGGTTGAAATAAAAGCAATCAGAAAGT
CTTTTAACGTCTTTAA back to topprotein sequence of rna8432 >rna8432-protein ID=rna8432-protein|Name=rna8432|organism=Nannochloropsis gaditana|type=polypeptide|length=428bp
MCGRARCSCSISAVATTYGVPGGRIYRADRFRPRHNLHPGHTSPVIVRAG
GYERHCRRQPTTGKAKGGDTSQTRDACQEKKGEDGDLGERAVVVMHWGLI
PSWHKEGEKLDFFRAFNARSETVAVKPMFRRLADTKRCLVCVEGFYEWKK
DKKGQKQPFYCHSRDPSHPLLSLAGLYDVWYRPPRSDEKVEGAVEDEVFF
SFTILTTEAASSFAWLHDRMPLILQSKEEEEAWLEGGAEGGPRIAEILPK
LWGQKGEGKGKQGGREVPELICEPVSKRMNSMAYEGEDCAVPIVLEEEGK
EGGGKGTLDVFFGGRTGRAAVKEDHGKGREEGEGGKPAKTLDASRKAKKE
EGAAGEDEVQVLTPSWLEEGRGGNVGDSAKKPRMEQAVERRGAARGGEKA
SRKGGAINDVTSAEKRQRTMQSFFPLSK back to topmRNA from alignment at KK037248.1:667827..669817- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8432 ID=rna8432|Name=rna8432|organism=Nannochloropsis gaditana|type=mRNA|length=1991bp|location=Sequence derived from alignment at KK037248.1:667827..669817- (Nannochloropsis gaditana)
GACTTCTCCATGTCTTACCTGCTGTCTTCAATTTTTATACCCTCCCACGT
TGTCCACTTCAGAAGCCGACATCAGCCTCTTTATGTGTGGCCGGGCCCGT
TGTTCTTGCTCAATATCTGCTGTGGCCACCACATACGGCGTTCCTGGAGG
GCGCATATACAGAGCAGATCGTTTTCGGCCCCGGCATAACCTGCACCCAG
GACATACTTCACCAGTTATTGTCAGGGCGGGAGGTTACGAACGCCACTGC
CGACGACAGCCCACGACAGGGAAGGCGAAAGGAGGAGACACATCGCAGAC
TCGAGATGCATGCCAAGAAAAGAAGGGAGAAGACGGGGACCTGGGGGAGA
GGGCAGTGGTGGTGATGCATTGGGGCCTGATTCCATCATGGCACAAGGAA
GGGGAGAAGCTGGATTTTTTCCGCGCGTTTAATGCCCGTTCAGAGACGGT
GAGACATCATGCATGATTCAATTTTTCCTTAGAATGGCGTTATCCTTCCA
AGCAAATGTCATCACAGCGAATGCCGCCGTGGAGAGGGGATAGGTTGCAT
ACTTGGGAGGGGGCGATGGTACTTTCTTGCCCTCTCTGTGGGGGAGTGCT
CACTAGCCTCCGATCATCTCGATTCGTCGACCTGTAGGTGGCCGTGAAGC
CGATGTTCCGTCGGCTGGCCGATACCAAGCGTTGCCTCGTCTGCGTGGTG
AGCTCCTTTAATCCCTTGTGCCCGTCTCTCCGTCCCCGCGGTGTCCGTGA
TCCCACCGGCTCGAATCCTCCTCACCTCCCTTTTCGTTGCCGCACCACCC
TTAGGAGGGCTTCTACGAGTGGAAAAAGGTAAGCCCCGTTCCTTTCTCAC
TGCTCGTGCGCCGTGACAGACACCGCATGGACGATCCCCTCCCCTTACCA
GGACAAGAAAGGGCAAAAGCAGCCTTTCTACTGCCACTCCCGCGACCCCT
CCCACCCTCTCCTCTCCCTTGCCGGGCTCTACGACGTTTGGTACCGGCCT
CCTCGGTCAGACGAGAAGGTAGAGGGCGCGGTGGAGGACGAGGTCTTCTT
CTCCTTCACCATCCTGACCACCGAGGCGGCCTCGTCGTTTGCCTGGCTCC
ATGACCGCATGCCCCTGATATTGCAGAGCAAGGAGGAGGAGGAGGCGTGG
CTTGAGGGAGGGGCCGAGGGCGGGCCGCGAATCGCCGAGATCTTGCCGAA
ATTGTGGGGCCAGAAAGGAGAAGGCAAAGGGAAACAAGGTGGGAGGGAAG
TGCCGGAGTTGATCTGTGAGCCTGTGAGCAAGCGGATGAACAGCATGGCG
TACGAAGGGGAGGACTGTGCAGTGCCCATTGTTTTGGAAGAAGAAGGGAA
GGAGGGCGGGGGGAAGGGGACTTTGGATGTTTTCTTCGGGGGAAGGACGG
GTCGGGCAGCAGTTAAGGAGGATCACGGGAAGGGGAGGGAGGAAGGAGAG
GGGGGGAAACCGGCGAAGACCCTAGACGCCTCGCGCAAAGCAAAGAAGGA
GGAAGGAGCAGCGGGGGAGGACGAGGTGCAGGTGTTGACGCCAAGTTGGT
TGGAGGAAGGGAGGGGCGGGAATGTAGGAGACAGTGCGAAAAAACCTCGA
ATGGAGCAGGCTGTAGAGAGACGTGGTGCGGCACGAGGAGGGGAGAAAGC
AAGCAGGAAAGGAGGGGCTATAAACGACGTAACGAGTGCTGAGAAGCGAC
AGAGGACCATGCAGAGCTTTTTCCCCCTGTCCAAATGAGGCCGGAGGTGC
TACCTGGGGACGAGGAGAGAAGTTGAAGGCGGAACCCTGGATAAAGGGCG
TCGATAGCGACAGGGGGAGGAGAGGTGGCCTTCCATGTGAAAAAGGAGGG
AGACGGGGGTGAGGGAAATCAGAAGAAAGGAGAATTCGCGTGCTTGAACA
AGTAAAGAGCGTGTACAGGCATGTTTAAAGGCTGCGCGAGCGTTAGAGAC
TCTGGAATTAAAGACGTTAAAAGACTTTCTGATTGCTTTTA back to topCoding sequence (CDS) from alignment at KK037248.1:667827..669817- >rna8432 ID=rna8432|Name=rna8432|organism=Nannochloropsis gaditana|type=CDS|length=5148bp|location=Sequence derived from alignment at KK037248.1:667827..669817- (Nannochloropsis gaditana)
GACAAGAAAGGGCAAAAGCAGCCTTTCTACTGCCACTCCCGCGACCCCTC
CCACCCTCTCCTCTCCCTTGCCGGGCTCTACGACGTTTGGTACCGGCCTC
CTCGGTCAGACGAGAAGGTAGAGGGCGCGGTGGAGGACGAGGTCTTCTTC
TCCTTCACCATCCTGACCACCGAGGCGGCCTCGTCGTTTGCCTGGCTCCA
TGACCGCATGCCCCTGATATTGCAGAGCAAGGAGGAGGAGGAGGCGTGGC
TTGAGGGAGGGGCCGAGGGCGGGCCGCGAATCGCCGAGATCTTGCCGAAA
TTGTGGGGCCAGAAAGGAGAAGGCAAAGGGAAACAAGGTGGGAGGGAAGT
GCCGGAGTTGATCTGTGAGCCTGTGAGCAAGCGGATGAACAGCATGGCGT
ACGAAGGGGAGGACTGTGCAGTGCCCATTGTTTTGGAAGAAGAAGGGAAG
GAGGGCGGGGGGAAGGGGACTTTGGATGTTTTCTTCGGGGGAAGGACGGG
TCGGGCAGCAGTTAAGGAGGATCACGGGAAGGGGAGGGAGGAAGGAGAGG
GGGGGAAACCGGCGAAGACCCTAGACGCCTCGCGCAAAGCAAAGAAGGAG
GAAGGAGCAGCGGGGGAGGACGAGGTGCAGGTGTTGACGCCAAGTTGGTT
GGAGGAAGGGAGGGGCGGGAATGTAGGAGACAGTGCGAAAAAACCTCGAA
TGGAGCAGGCTGTAGAGAGACGTGGTGCGGCACGAGGAGGGGAGAAAGCA
AGCAGGAAAGGAGGGGCTATAAACGACGTAACGAGTGCTGAGAAGCGACA
GAGGACCATGCAGAGCTTTTTCCCCCTGTCCAAATGAGAGGGCTTCTACG
AGTGGAAAAAGGTGGCCGTGAAGCCGATGTTCCGTCGGCTGGCCGATACC
AAGCGTTGCCTCGTCTGCGTGATGTGTGGCCGGGCCCGTTGTTCTTGCTC
AATATCTGCTGTGGCCACCACATACGGCGTTCCTGGAGGGCGCATATACA
GAGCAGATCGTTTTCGGCCCCGGCATAACCTGCACCCAGGACATACTTCA
CCAGTTATTGTCAGGGCGGGAGGTTACGAACGCCACTGCCGACGACAGCC
CACGACAGGGAAGGCGAAAGGAGGAGACACATCGCAGACTCGAGATGCAT
GCCAAGAAAAGAAGGGAGAAGACGGGGACCTGGGGGAGAGGGCAGTGGTG
GTGATGCATTGGGGCCTGATTCCATCATGGCACAAGGAAGGGGAGAAGCT
GGATTTTTTCCGCGCGTTTAATGCCCGTTCAGAGACGGACAAGAAAGGGC
AAAAGCAGCCTTTCTACTGCCACTCCCGCGACCCCTCCCACCCTCTCCTC
TCCCTTGCCGGGCTCTACGACGTTTGGTACCGGCCTCCTCGGTCAGACGA
GAAGGTAGAGGGCGCGGTGGAGGACGAGGTCTTCTTCTCCTTCACCATCC
TGACCACCGAGGCGGCCTCGTCGTTTGCCTGGCTCCATGACCGCATGCCC
CTGATATTGCAGAGCAAGGAGGAGGAGGAGGCGTGGCTTGAGGGAGGGGC
CGAGGGCGGGCCGCGAATCGCCGAGATCTTGCCGAAATTGTGGGGCCAGA
AAGGAGAAGGCAAAGGGAAACAAGGTGGGAGGGAAGTGCCGGAGTTGATC
TGTGAGCCTGTGAGCAAGCGGATGAACAGCATGGCGTACGAAGGGGAGGA
CTGTGCAGTGCCCATTGTTTTGGAAGAAGAAGGGAAGGAGGGCGGGGGGA
AGGGGACTTTGGATGTTTTCTTCGGGGGAAGGACGGGTCGGGCAGCAGTT
AAGGAGGATCACGGGAAGGGGAGGGAGGAAGGAGAGGGGGGGAAACCGGC
GAAGACCCTAGACGCCTCGCGCAAAGCAAAGAAGGAGGAAGGAGCAGCGG
GGGAGGACGAGGTGCAGGTGTTGACGCCAAGTTGGTTGGAGGAAGGGAGG
GGCGGGAATGTAGGAGACAGTGCGAAAAAACCTCGAATGGAGCAGGCTGT
AGAGAGACGTGGTGCGGCACGAGGAGGGGAGAAAGCAAGCAGGAAAGGAG
GGGCTATAAACGACGTAACGAGTGCTGAGAAGCGACAGAGGACCATGCAG
AGCTTTTTCCCCCTGTCCAAATGAGAGGGCTTCTACGAGTGGAAAAAGGT
GGCCGTGAAGCCGATGTTCCGTCGGCTGGCCGATACCAAGCGTTGCCTCG
TCTGCGTGATGTGTGGCCGGGCCCGTTGTTCTTGCTCAATATCTGCTGTG
GCCACCACATACGGCGTTCCTGGAGGGCGCATATACAGAGCAGATCGTTT
TCGGCCCCGGCATAACCTGCACCCAGGACATACTTCACCAGTTATTGTCA
GGGCGGGAGGTTACGAACGCCACTGCCGACGACAGCCCACGACAGGGAAG
GCGAAAGGAGGAGACACATCGCAGACTCGAGATGCATGCCAAGAAAAGAA
GGGAGAAGACGGGGACCTGGGGGAGAGGGCAGTGGTGGTGATGCATTGGG
GCCTGATTCCATCATGGCACAAGGAAGGGGAGAAGCTGGATTTTTTCCGC
GCGTTTAATGCCCGTTCAGAGACGGACAAGAAAGGGCAAAAGCAGCCTTT
CTACTGCCACTCCCGCGACCCCTCCCACCCTCTCCTCTCCCTTGCCGGGC
TCTACGACGTTTGGTACCGGCCTCCTCGGTCAGACGAGAAGGTAGAGGGC
GCGGTGGAGGACGAGGTCTTCTTCTCCTTCACCATCCTGACCACCGAGGC
GGCCTCGTCGTTTGCCTGGCTCCATGACCGCATGCCCCTGATATTGCAGA
GCAAGGAGGAGGAGGAGGCGTGGCTTGAGGGAGGGGCCGAGGGCGGGCCG
CGAATCGCCGAGATCTTGCCGAAATTGTGGGGCCAGAAAGGAGAAGGCAA
AGGGAAACAAGGTGGGAGGGAAGTGCCGGAGTTGATCTGTGAGCCTGTGA
GCAAGCGGATGAACAGCATGGCGTACGAAGGGGAGGACTGTGCAGTGCCC
ATTGTTTTGGAAGAAGAAGGGAAGGAGGGCGGGGGGAAGGGGACTTTGGA
TGTTTTCTTCGGGGGAAGGACGGGTCGGGCAGCAGTTAAGGAGGATCACG
GGAAGGGGAGGGAGGAAGGAGAGGGGGGGAAACCGGCGAAGACCCTAGAC
GCCTCGCGCAAAGCAAAGAAGGAGGAAGGAGCAGCGGGGGAGGACGAGGT
GCAGGTGTTGACGCCAAGTTGGTTGGAGGAAGGGAGGGGCGGGAATGTAG
GAGACAGTGCGAAAAAACCTCGAATGGAGCAGGCTGTAGAGAGACGTGGT
GCGGCACGAGGAGGGGAGAAAGCAAGCAGGAAAGGAGGGGCTATAAACGA
CGTAACGAGTGCTGAGAAGCGACAGAGGACCATGCAGAGCTTTTTCCCCC
TGTCCAAATGAGAGGGCTTCTACGAGTGGAAAAAGGTGGCCGTGAAGCCG
ATGTTCCGTCGGCTGGCCGATACCAAGCGTTGCCTCGTCTGCGTGATGTG
TGGCCGGGCCCGTTGTTCTTGCTCAATATCTGCTGTGGCCACCACATACG
GCGTTCCTGGAGGGCGCATATACAGAGCAGATCGTTTTCGGCCCCGGCAT
AACCTGCACCCAGGACATACTTCACCAGTTATTGTCAGGGCGGGAGGTTA
CGAACGCCACTGCCGACGACAGCCCACGACAGGGAAGGCGAAAGGAGGAG
ACACATCGCAGACTCGAGATGCATGCCAAGAAAAGAAGGGAGAAGACGGG
GACCTGGGGGAGAGGGCAGTGGTGGTGATGCATTGGGGCCTGATTCCATC
ATGGCACAAGGAAGGGGAGAAGCTGGATTTTTTCCGCGCGTTTAATGCCC
GTTCAGAGACGGACAAGAAAGGGCAAAAGCAGCCTTTCTACTGCCACTCC
CGCGACCCCTCCCACCCTCTCCTCTCCCTTGCCGGGCTCTACGACGTTTG
GTACCGGCCTCCTCGGTCAGACGAGAAGGTAGAGGGCGCGGTGGAGGACG
AGGTCTTCTTCTCCTTCACCATCCTGACCACCGAGGCGGCCTCGTCGTTT
GCCTGGCTCCATGACCGCATGCCCCTGATATTGCAGAGCAAGGAGGAGGA
GGAGGCGTGGCTTGAGGGAGGGGCCGAGGGCGGGCCGCGAATCGCCGAGA
TCTTGCCGAAATTGTGGGGCCAGAAAGGAGAAGGCAAAGGGAAACAAGGT
GGGAGGGAAGTGCCGGAGTTGATCTGTGAGCCTGTGAGCAAGCGGATGAA
CAGCATGGCGTACGAAGGGGAGGACTGTGCAGTGCCCATTGTTTTGGAAG
AAGAAGGGAAGGAGGGCGGGGGGAAGGGGACTTTGGATGTTTTCTTCGGG
GGAAGGACGGGTCGGGCAGCAGTTAAGGAGGATCACGGGAAGGGGAGGGA
GGAAGGAGAGGGGGGGAAACCGGCGAAGACCCTAGACGCCTCGCGCAAAG
CAAAGAAGGAGGAAGGAGCAGCGGGGGAGGACGAGGTGCAGGTGTTGACG
CCAAGTTGGTTGGAGGAAGGGAGGGGCGGGAATGTAGGAGACAGTGCGAA
AAAACCTCGAATGGAGCAGGCTGTAGAGAGACGTGGTGCGGCACGAGGAG
GGGAGAAAGCAAGCAGGAAAGGAGGGGCTATAAACGACGTAACGAGTGCT
GAGAAGCGACAGAGGACCATGCAGAGCTTTTTCCCCCTGTCCAAATGAGA
GGGCTTCTACGAGTGGAAAAAGGTGGCCGTGAAGCCGATGTTCCGTCGGC
TGGCCGATACCAAGCGTTGCCTCGTCTGCGTGATGTGTGGCCGGGCCCGT
TGTTCTTGCTCAATATCTGCTGTGGCCACCACATACGGCGTTCCTGGAGG
GCGCATATACAGAGCAGATCGTTTTCGGCCCCGGCATAACCTGCACCCAG
GACATACTTCACCAGTTATTGTCAGGGCGGGAGGTTACGAACGCCACTGC
CGACGACAGCCCACGACAGGGAAGGCGAAAGGAGGAGACACATCGCAGAC
TCGAGATGCATGCCAAGAAAAGAAGGGAGAAGACGGGGACCTGGGGGAGA
GGGCAGTGGTGGTGATGCATTGGGGCCTGATTCCATCATGGCACAAGGAA
GGGGAGAAGCTGGATTTTTTCCGCGCGTTTAATGCCCGTTCAGAGACG back to top
|