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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100569g1.10377.mrna |
| Orig protein id | gnl|cribi|Naga_100569g1.10377 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:638673..640257 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8418 ID=rna8418|Name=rna8418|organism=Nannochloropsis gaditana|type=mRNA|length=2376bp
GTGGCGGGTGAGCTCGCCATCTACTACGCGCTGGCCCTGGACCTCCGGGT
ATACTACACGACGCCCTTGAAGGCTTTGTCCAACCAGAAATTCGCGGACT
TTTGCCGGCAATTTGGGCCCGAGCGTGTGGGTCTTCTGACGGGTGACACC
AACATCAACCGTGGCGCGCAGGTTACCATCATGACGACCGAAGTCTACCG
AAACATGCTCTACACGGGGGATGCCGGAGAGCTGGACCAGGTCTTCGCGG
TCGTCTTCGACGAGTTCCACTATATGAACGACCCGGAGAGAGGGACCGTC
TGGGAAGAGAGCGTCATCCTTTCGCCCCCGCACATCCTCTTCGTGGCGCT
TTCCGCCACCATCGCCAACGTGGGCCAGGTGGCGGGCTGGATCAGCACGG
TGCACGGTCCGACCCGAACCGTGCTCTCTCACTTTAGGCCCGTGCCTCTC
AAATATTATTTTATCGACAACGAAGGCATCTACCGGCTCTTCGACGACGA
CGACGCAGGGCCCGGGGCGCCCAAGGGACTCACCACCTTGGTCCGGCAGT
CGGCGGTGGGGATGGGGGCCGGCGGAGGGCGGGGGGGAGGGGCCGGGGGA
GGGGCGGGCAAGAGAAGATCGGACGAGAAGGAGAAGGTGGTCATGGTGGC
CTCAGGCCCCGGGGGCAAGAAGAAGATTGCCATGGTGGAAGCGCCTCAGC
CGGTGAACGATTTCTTGAGGCGGCGCGCGTTGCGGGAGCGTCGTCTATTG
GCAGAGAGTGCTGGGATCGGAGGGAGGGAAGGAAAAGGGAGCCGGAGTAT
GAAAGGAGGAGCTGGTTTCGGGAAGGGCAAGCGCCCGCCGGACGGGATTC
GCTTCACAGCCTGGTACCGAGACCTGGTCGACGCGCTGAACCGGCGCGAC
CTCCTGCCGGCCATCGTCTTCATTTTTTCCCGCGCAGGTTGTGACAGGGC
AGCAGCGGAGGTTGGTGGTATTGCTTCCAAATTGGGGCTTCTGTCCCACG
CGGAAAAGAAGCAAATCAAAGACAGGCTGAGTGCCTTTCGGCTGGCGAAT
CCGCAGGTGCCTTTGGAGAAGGAAAAGGTTCGGCTCCTCCTCTGCGGCCT
GGCCACCCACCACGCCGGCCTCCTGCCTGTGTATAAGGCTCTGGTGGAGG
AGCTCTTCAATGAAAATCTGATTCGGGTAGTGTTCGCGACCGAGACGTTG
GCAGCCGGCGTGAACATGCCAGCGCGGGCCACGGTTATCTCCACGCTCAG
CAAGAAGATCGGCAAAGTGACCATAAATTTACAGCCTTCACAGCTCCTGC
AAATGGCCGGTCGGGCGGGAAGACGAGGCAAAGACACCATGGGCCACGTG
GTCCTGATGCGCTCTCGCTCCGAAGACGCCTTGGACGCCTTCAACCTCCT
TTGTGCTCCTGTGGATTCCATCCGCTCCCATTTCCGATCCTCCTACGCGA
TGGTGGTCAACATCCTTCGCACCCGCGATTTGGAAAGCTGCAAGCTCCTC
GTAGAACGTTCCTTTGGGAATTATTTGAAGGCGTACTCTTTGGGGGAAGA
GCAGGAAGTAGATATAGCGAACAGAGATGAATTGAAAGGCCGCTTGGGAG
GGGTGGACGCAGGGGAGCTTCGCATGTACGAAGATATGCAGGAGAAGCTG
ATGAAGGCGACGCGCGCGGAACGGAACTTGAAAAGGGAAGCCGCGAAGCT
GGAAGAGAAGTATGTCAAAGCTGTTTTAGGAGCGGTCCGTCTTGGCGCCG
GGCTTCTTCTCCGGGACGGGCGTACCCTGGCCCTTATCGGAGAGGCCACT
CTACCCCACCCTCTCACCAACACACAGCTCAATCTCTACGTGGGGTTGAG
TCAGAACGGGAAGCTGGTGGCCGTCTCAATAGGGGACATACGGAGCGTGG
AGGCGGAGAAAGATGGGCTGGACGTGGAAACCGCCTTTCAGATCTCGCTT
TTGCTGGAAGGGACGGCCCAGGGGGGCCTGCTCTGGCGTCCGGCAGGAGG
AAGCGGGGGAGGGGCCGGGGGAGGAAGCGGGACCTTGACCTTCGTCGCTG
AGCCGGTGGATCCGCACTCCCAGGAGGCCCAAGATTTGGCCGCTTACCTG
CTGGAACAGGGACAGCGGGTCCCATCCCTTCCCCTCCCCATGCCATCGCC
GGATCTGGTGCGGCAACAGGCCTTGGTGGCCTCCCTCCAGGAGCAGATCG
GTCTTTCCCCCTTGTCCGGGCTGGGGGAGGCCGCGTCCGCCTCCCTATTG
GCGGTCCGCAATGAACTGGAGCGAGTGGAACGCCGGATCAAGAAGAGAGA
GAAGACGTTGCGGGGGGTGCGGCAGAAGGAGTGGGAGGATTTCCTGGCGG
CCGTGGATCTCTTGGAAGGTAGGTAG back to topprotein sequence of rna8418 >rna8418-protein ID=rna8418-protein|Name=rna8418|organism=Nannochloropsis gaditana|type=polypeptide|length=301bp
MGEEKGGKESLRKQLMETMYGKDRWGTGGAGGGADGGRGGGVPASVSILN
RGGGIRPRFRRKVESMTRAELKRRRQEEVKEVYGEGAEEEEEGEQEEEVR
EKEAGVEAAFAEFLAETKAKRSKLEATEPLEKFLARTAVLGEEVTEREEG
EEEEEEGEEEEEEEEELEGYSFVDIEAAFKDGGDGKWEGEIDFEKEAALY
EEGLYVMDGDEYNEMDLSEEDNPVLRAARVERPEGGREGGRVIEIEEEGA
EGGASAIEALERGGEEKLGEIEEEEDVFAALLSALDSAPAVLPPMGKGEE
S back to topmRNA from alignment at KK037248.1:638673..640257+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8418 ID=rna8418|Name=rna8418|organism=Nannochloropsis gaditana|type=mRNA|length=1585bp|location=Sequence derived from alignment at KK037248.1:638673..640257+ (Nannochloropsis gaditana)
atgggggaggagaagggggggaaagaaagcttgAGGAAGCAGTTGATGGA
AACCATGTACGGGAAGGATCGgtgggggacgggaggggcggggggagggg
cggacggaggacggggcggaggggtgcCGGCGTCCGTTAGTATTTTGAAC
CGGGGTGGAGGGATCAGGCCCAGGTTTAGGCGCAAAGTCGAATCGATGAC
ACGCGCGGAGTTGaagaggcggcggcaggaggaagtgaaggaggtgTATG
GTGAaggtgcggaggaggaagaggagggggaacaggaggaggaggtgcgg
gagaaggaagctggAGTAGAGGCAGCGTTCGCGGAATTTTTGGCGGAAAc
caaggcaaagaggagcaAGTTGGAGGCAACGGAGCCTCTGGAGAaatttt
tggcgcgaacggCAGtcttgggggaggaggtgacggaaagggaggagggg
gaggaagaggaggaggaaggggaggaggaagaggaggaggaagaggagct
cgagGGTTACTCTTTCGTGGACATCGAGGCTGCATTTAAGGACGGTGGTG
ACGggaagtgggaaggggagatcgatttcgagaaagaggcagCGTTGTAC
GAGGAAGGCTTGTATGTCATGGACGGAGACGAGTACAATGAAATGGACTT
GAGTGAGGAGGATAATCCCGTGTTGCGGGCGGCCAGGGTGGAGaggccag
agggagggagggagggagggagggtaatagagatagaggaggagggagca
gagggaggggcgtcggCGATTGAGGCgctggaaaggggaggggaggagaa
actTGGGGagatagaggaggaggaggacgtgttTGCGGCTCTACTATCCG
CGTTGGATTCGGCGCCGGCGGTGCTGCCTCCCATGGgtaaaggggaggaa
agctaacgaggatgaggggggTACTGACGAAAGTTGAAGTGCGCTGTGGA
GATCCTTCGTCAGCGCCGAGGCCGACCGTGTAGGAGATGCatggtagagg
gagggagcggatgCTTTACCGCTGCTACACTTTAAGAGTTCCCGCtcaaa
gggcgaggggaataCTTGTGTACTATAAGTTAGAATCCCTGTCCTTAAAC
CTGATGCTATGCTGGTTGCTCAGCTGCATTTTTCTGCACCGATCTAGTAA
AACCAAGGAATGGAATTTTCACCCCTTTTGTATTGAATCTGATCATATCA
GCCACATAAAGTAATTTTAGATAGGAATTTTTCAGAATTAAGTTTTTCGT
GTATAGATAATCTCGATAATCATCCTAAACGTGCCTTACGCCTACAACGA
TGTTACTCAGCACGTTGTAGCAATTATTCGGAAGCATTGACGCGCCTTGT
TACTAAAAGGCTCTTCTTGGACGATGCAGGTATCGCTTGTGGCGCCATTT
TTCTCTGACATAACGAAAGTAAACTCACTTCCAGAAACGaatccctccat
ccattcCCTCAGAACAAAGTGTGTGCCCGGCTCGAGGCTGTAGCTTGAAC
AACACCAACGATGTAAAGCAGTTTTGAAGCAATAGTGCGTTCTAGCAATT
GAAATCTAGAAAGGTATTCCCTATTGTAAAAACCG back to topCoding sequence (CDS) from alignment at KK037248.1:638673..640257+ >rna8418 ID=rna8418|Name=rna8418|organism=Nannochloropsis gaditana|type=CDS|length=906bp|location=Sequence derived from alignment at KK037248.1:638673..640257+ (Nannochloropsis gaditana)
atgggggaggagaagggggggaaagaaagcttgAGGAAGCAGTTGATGGA
AACCATGTACGGGAAGGATCGgtgggggacgggaggggcggggggagggg
cggacggaggacggggcggaggggtgcCGGCGTCCGTTAGTATTTTGAAC
CGGGGTGGAGGGATCAGGCCCAGGTTTAGGCGCAAAGTCGAATCGATGAC
ACGCGCGGAGTTGaagaggcggcggcaggaggaagtgaaggaggtgTATG
GTGAaggtgcggaggaggaagaggagggggaacaggaggaggaggtgcgg
gagaaggaagctggAGTAGAGGCAGCGTTCGCGGAATTTTTGGCGGAAAc
caaggcaaagaggagcaAGTTGGAGGCAACGGAGCCTCTGGAGAaatttt
tggcgcgaacggCAGtcttgggggaggaggtgacggaaagggaggagggg
gaggaagaggaggaggaaggggaggaggaagaggaggaggaagaggagct
cgagGGTTACTCTTTCGTGGACATCGAGGCTGCATTTAAGGACGGTGGTG
ACGggaagtgggaaggggagatcgatttcgagaaagaggcagCGTTGTAC
GAGGAAGGCTTGTATGTCATGGACGGAGACGAGTACAATGAAATGGACTT
GAGTGAGGAGGATAATCCCGTGTTGCGGGCGGCCAGGGTGGAGaggccag
agggagggagggagggagggagggtaatagagatagaggaggagggagca
gagggaggggcgtcggCGATTGAGGCgctggaaaggggaggggaggagaa
actTGGGGagatagaggaggaggaggacgtgttTGCGGCTCTACTATCCG
CGTTGGATTCGGCGCCGGCGGTGCTGCCTCCCATGGgtaaaggggaggaa
agctaa back to top
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