|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100933g1.1611.mrna |
| Orig protein id | gnl|cribi|Naga_100933g1.1611 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:584615..585315 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8405 ID=rna8405|Name=rna8405|organism=Nannochloropsis gaditana|type=mRNA|length=848bp
CTTTGACCCAAACAACTGAAAAGTTACACTCGACACCCACACCCAGGCCG
TGGACGGAGGTGTAGCCAGTGCTGTGAGCTAGCATTGCCGTCGTTGGTGT
ACAGAAGTATGCGAACCACCATGCACTTGCGCCGGTGTGCGTCCCTCCTG
GTGACTCCCCCCACCATGGGACCTCGGTGCGCCGGACATCAACATCGACT
GTCCCAACGCCCTCTGCCATACTCCATGTCCTCGTCCCGTGCATGGTTCT
GCGTACACACCATCTCCGAGGATGAAAAAAGCGGCGCGCCTTTGCAATCG
GGGCCCCTCCAATTCTACTTTAAACCACCCGTGTCCTCCGCTTCCTCCCC
ATCGGCGAAGGTTGCAACGTCTCCTTTTCTTCGTCAGACCCATTCCACCT
TCAACAAGAGCATGAAATTGATAAACCCCTGCCGTCTCACGCTACGTCCC
TTCTTTTCTGGCCGTCCTACCTCCCTCTCCTCCACGGGCCCGCCCTCGTC
TTCCCCTCCCTCCGGTCCCGCCCCCCCCAAACCCACGTGGAAGGAGCTTT
TCAAGAAGTACGGCCCCGCCTTCCTCGTCTATTGGAACGGGGTATGGATC
TTATCGGGGATCACCATCTATGCAGCGCTAGAACTGGGGGGCGTGGACCC
CCTTCCCCTGGCACGTGCTGTGCATTTGGACGCCTTGATTGATTTGGAGA
AAATCGATCCTTCGCACGGGAATGTGGCCGTGGCCATACTTTTGAACGAG
GTGGTGGAGATCGTACGCTTTCCTTTTGTCCTGGCGACGGTCGCCAAAGG
TGGGTCGGGCCACGGGAGGGGGGAAAGGAGGGAAGGAGGGAAAGCGCC back to topprotein sequence of rna8405 >rna8405-protein ID=rna8405-protein|Name=rna8405|organism=Nannochloropsis gaditana|type=polypeptide|length=139bp
SPAPSFQVTAWWDQHKPAYFKPKPRADGSLPPSWGELVRIHGPPFLVWWG
TLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNM
GVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKTMPE back to topmRNA from alignment at KK037248.1:584615..585315+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8405 ID=rna8405|Name=rna8405|organism=Nannochloropsis gaditana|type=mRNA|length=701bp|location=Sequence derived from alignment at KK037248.1:584615..585315+ (Nannochloropsis gaditana)
tctcctgctccctctttccaggTGACGGCTTGGTGGGACCAGCACAAGCC
AGCCTACTTCAAGCCCAAGCCACGGGCGgacggctccctccctcccagtt
GGGGGGAATTGGTCCGGATCCACGGCCCCCCCTTCTTGGTCTGGTGGGGG
ACCCTGTGGGTCCTGGGTGCAGGAGGCTTGTTTCTAGGCTTCGAACACCA
CTTGTTCGGGGCGGACGTGGACGCGTTGACCCTGGCACGGGCTTGGGGGG
TGGACAAGGTGGTGGACTTGAGCGGGGTTCCCCCGAGTCTGGGGAACATG
GGCGTGGCCATCGCCTGCAATGAGGTCTTGGAGGtcgtccgctttccctt
GGCCCTCCTGACCGTGAAACCTTGGACGCGGTGGTGGTATCGGGTCAGGG
GAAAGACCATGCCGGAGTAgttcgggagggagggggggggggagaggggc
atgtgggaggggcggtggggaggtgaAGTGAGTAGGGTCCATGTAAgtgt
ggggggggggagaagagaaataGAGGAGACAAGGACATGTTGGGGTaagc
ggggaaggggtgaTGGGATGCGCAGAGCGCGATGCCGGTTCGGCCATGGA
ATGGAGtgcgaagggcgggggggaggaggctccgCGCGtctggagggcga
gggggagttTGAAACTCACGCAAAAAGAAACGGAAAACGACGGAATAGTG
A back to topCoding sequence (CDS) from alignment at KK037248.1:584615..585315+ >rna8405 ID=rna8405|Name=rna8405|organism=Nannochloropsis gaditana|type=CDS|length=420bp|location=Sequence derived from alignment at KK037248.1:584615..585315+ (Nannochloropsis gaditana)
tctcctgctccctctttccaggTGACGGCTTGGTGGGACCAGCACAAGCC
AGCCTACTTCAAGCCCAAGCCACGGGCGgacggctccctccctcccagtt
GGGGGGAATTGGTCCGGATCCACGGCCCCCCCTTCTTGGTCTGGTGGGGG
ACCCTGTGGGTCCTGGGTGCAGGAGGCTTGTTTCTAGGCTTCGAACACCA
CTTGTTCGGGGCGGACGTGGACGCGTTGACCCTGGCACGGGCTTGGGGGG
TGGACAAGGTGGTGGACTTGAGCGGGGTTCCCCCGAGTCTGGGGAACATG
GGCGTGGCCATCGCCTGCAATGAGGTCTTGGAGGtcgtccgctttccctt
GGCCCTCCTGACCGTGAAACCTTGGACGCGGTGGTGGTATCGGGTCAGGG
GAAAGACCATGCCGGAGTAg back to top
|