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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101073g2.6902.mrna |
| Orig protein id | gnl|cribi|Naga_101073g2.6902 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:548461..549251 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8388 ID=rna8388|Name=rna8388|organism=Nannochloropsis gaditana|type=mRNA|length=2125bp
CTTGCCCAGGTTTGACTCACCTCAGGGACACGCGGCCACCACGTCCCGTA
CACAAGTGCGTGCGTGGAGGACCTCGAGTCTGCACTTTGTCATGCCGCCG
CCCCTCTTCTTCCTAATTGTCGTGGCCACACTGTCCTGCCACAGCCCTTG
GAGCAGATATGGACATGTACAGGCATTTTTATCCCCCCATCCCCGATCCA
GAGGCACGCCAGAGTTTCGTGCCGTTGAGCGACGCACACCAGACGCCTCC
CCACTCTCCCTCTCCGCCCACACCCTGTCCACGTCCACGTCCGGGGGCCC
GACCGGCACATTTTTCACGGAGGAGAAGATGGAGGTGGAAGTCGGTGGCA
AGATCCTGGCCTTTGAGACGGGGAAAATCGGGCGAAGCGCGGACGGCTCG
GTCACGGTCCGTCAAGGCGAGACGGTCGTCTATGCCTCAGCCTGTGCCGA
GAACAAGCCCCAGGAGCTCGATTTCACCCCGCTCCGGATCGATTACTTCG
AACGTTTCTCCGCGGCCGGCATGACGAGCGGGTCCTACACGAAGCGGGAC
GGGCGGGCCTCGGACCGGGAGATCCTGGTCGCCCGCTTGATCGACCGACC
GTTACGGCCCATGCTCACGGAGGCTTGGACGTGCGAAACTCAGGTCTTGT
CCTGGGTGTTCAGCTACGACGGGGTCCACAACAGCGAGCCCATGGCCATT
TGTGCGGCCTCCGCCGCGGTTGTCCTCTCCTCCATCCCCCTGGAAACGCC
CGTGGCCGGGGTGCAGGTCGGGAGGGTGGACGGCCGCCTGGTCGTGAACC
CGACCAAGCAGGAGATGGCGAACAGCACCTTGAACCTGATGGTGGCGGGC
ACGGAGGAAGGAATTTTGATGATCGAAGGGGCCGCCGAGTTTTTGCCCGA
GGAGGTGCTCTTGGACGCGTTGCGGGAAGGCCATGCCGCCATTGCCGATA
TTTGCCGAGCCTTGCGGGAATGGGGCGCCAAGGTGGGGAAGCCGAAACGG
CTTGGGGATTTGTGCCTGGCACCCCCCGAGTTGAAGCCGTTGCTCCAAGA
AAGATACGCAAAGGCCATCGACGCCGCCTTGAAGAGCGGGAACCGAAACG
CCTACTCCGCCTCCCTCCACGGCATCGAGGACAGCATCGTCGCCAGCCTA
GGCGTGGACAGCGGGCTACCGGACGGAGAATTCCTGGCCCGGGACCTGAA
AGTCGAGTTCAAGAAACTGGTGAAACAGCGCATGGCTCTGATGGTGGCCG
CGGGGCGGGGGCGGGCGGACGGGCGGGGGCCCTCCGAGGTCCGGCCCATA
TCGATCGAGATGGGCGTGTTGCCCACCCCGCACGGGAGTGTCCTTTTCAC
CCGGGGTGAGACCCAGGCCCTGGTCACCGTCACCTTGGGGAACAAGGGGA
TGAGCCAACGCACGGAAAGCTTGGACGGGAGCGATTCCAAACGCTTTTAT
TTGCAGTATTCCTTCCCGCCCTCCTCGGTCGGGGAGGTGGGACGGGTTGG
GGCCCCCGGGCGCCGGGAGATCGGCCACGGAAATTTGGCGGAACGCGCCC
TCTTACCGGTCATCCCCTCCGAGGAAGATTTTCCGTACGCCCTGCGGGTG
GAAAGCATGATCATGGAAAGCTGCGGGTCCTCGTCGATGGCCTCCGCCTG
CGGGGGCAGCTTGGCCTTGATGGACTGTGGGGTGCCTCTGAAGCGGCACA
TCGCGGGTGTGGCCATGGGCCTGCTCTTGGACGAGGCAGTGGACGAACCC
ATCGTGCTGACGGATATCTTGGGCTTGGAGGATGCTTTCGGGACTATGGA
CTTCAAGATTTGCGGGGACGCGGAGGGGGTGACCACCTTCCAGTTGGACA
TAAAATGCAACGGGCTGACCTTTCCGACCCTGGAGAAGGCCTTGCGTCAG
GCGAAGGAGGGGCGCTTGCACATTTTGAAAATCATGGAAGAAGCCTGCCC
CGCCCCCCGGGCGGAGATGCGGGGGAATGTGATGCGAATATCTCAGGTGA
AGATCAACCCCTCCTTCATCGGGAAGCTGATCGGACCACAGGGGCGCCAG
GTAGGGAGGGGGGGACGGAGGGCGGGAGGGAGGGCGGGAGGGAAGCGACG
TCCGTTAAGGTGTCTGGTAAAGTGA back to topprotein sequence of rna8388 >rna8388-protein ID=rna8388-protein|Name=rna8388|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp
MPGPATEGILSSLVRCLHLPPPDLHHARRSNGGSGKEEEPCRWGPRGVRR
RLEELEESEIQALLDALREYIVVEANPQSRQATFKGHARVLDLPTDAEQL
EEHGEEGMEYPEEDCAVKAVDVLQVLLVWRKTSLKAIEICLEMLGQGALQ
GKAAVYCISEVRRSVAVGETLGFDDDEEEEKEEGEGGRVGNGRAESSGRK
RKRVQGTLGKKEEGEEEEEEEEEEEEG back to topmRNA from alignment at KK037248.1:548461..549251+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8388 ID=rna8388|Name=rna8388|organism=Nannochloropsis gaditana|type=mRNA|length=791bp|location=Sequence derived from alignment at KK037248.1:548461..549251+ (Nannochloropsis gaditana)
TGCACGTTTttgggtggtgggggtggcgaGTCTCAACGACCAGGAAGCAG
AAAAAGGCCCCCCTCATTCAACAAGATAAGGGGATTTGTTGCTTGAATAT
TCTTCCATATGCCCGGTCCGGCCACGGAGGGGATCCTATCGTCCCTCGTA
CGATGTCtacaccttcctcctcccgactTACATCATGCCCGGCGTTCTAA
TGGCGGtagtgggaaggaagaagagccatGCAGGTGGGGACCTCGTGGAG
TCCGCCGACGCCTGGAAGAACTCGAGGAAAGCGAAATCCAGGCGTTGCTG
GACGCGTTGAGAGAATACATCGTCGTGGAGGCGAATCCCCAGTCTCGGCA
GGCCACCTTCAAAGGACACGCCCGcgtgctcgacctccccaccgACGCAG
AGCAGCTGGaagagcacggggaggaagggatggaatacccggaggaggac
tgCGCAGTGAAGGCGGTAGACGTGCTTCAAGTGCTGCTTGTTTGGCGGAA
AACAAGCCTCAAAGCGATCGAAATTTGCCTGGAAATGCTCGGGCAAGGGG
CTTTGCAGGGGAAAGCGGCGGTGTATTGCATCTCGGAGGTGCGGCGCTCC
GTGGCCGTAGGGGAGACTCTGGGCTtcgacgacgacgaagaggaggagaa
ggaggagggggagggggggagagttggaaatggaagggcagagagcagcg
gaaggaagaggaagcgtgTCCAAGGGACgctgggaaagaaggaggagggg
gaggaggaggaggaggaggaggaggaggaggaggagggaag back to topCoding sequence (CDS) from alignment at KK037248.1:548461..549251+ >rna8388 ID=rna8388|Name=rna8388|organism=Nannochloropsis gaditana|type=CDS|length=683bp|location=Sequence derived from alignment at KK037248.1:548461..549251+ (Nannochloropsis gaditana)
ATGCCCGGTCCGGCCACGGAGGGGATCCTATCGTCCCTCGTACGATGTCt
acaccttcctcctcccgactTACATCATGCCCGGCGTTCTAATGGCGGta
gtgggaaggaagaagagccatGCAGGTGGGGACCTCGTGGAGTCCGCCGA
CGCCTGGAAGAACTCGAGGAAAGCGAAATCCAGGCGTTGCTGGACGCGTT
GAGAGAATACATCGTCGTGGAGGCGAATCCCCAGTCTCGGCAGGCCACCT
TCAAAGGACACGCCCGcgtgctcgacctccccaccgACGCAGAGCAGCTG
GaagagcacggggaggaagggatggaatacccggaggaggactgCGCAGT
GAAGGCGGTAGACGTGCTTCAAGTGCTGCTTGTTTGGCGGAAAACAAGCC
TCAAAGCGATCGAAATTTGCCTGGAAATGCTCGGGCAAGGGGCTTTGCAG
GGGAAAGCGGCGGTGTATTGCATCTCGGAGGTGCGGCGCTCCGTGGCCGT
AGGGGAGACTCTGGGCTtcgacgacgacgaagaggaggagaaggaggagg
gggagggggggagagttggaaatggaagggcagagagcagcggaaggaag
aggaagcgtgTCCAAGGGACgctgggaaagaaggaggagggggaggagga
ggaggaggaggaggaggaggaggaggagggaag back to top
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