rna8386, rna8386 (mRNA) Nannochloropsis gaditana

Overview
Namerna8386
Unique Namerna8386
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length804
Alignment locationKK037248.1:545112..545481 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103901g1.5809.mrna
Orig protein idgnl|cribi|Naga_103901g1.5809
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:545112..545481 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103901g1gene8126Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22314.1cds8359Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8386rna8386-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8386 ID=rna8386|Name=rna8386|organism=Nannochloropsis gaditana|type=mRNA|length=804bp
ATGAAGAAATTAGCATGGCCGCTGCCGATACGAATCAGAAGCTCGCGACT
TTGGAACCAATTGCCCTCCGCCAGTTTACGGACCCTGGTTTTGTCGGGCC
CAAGATTTACTTGCATCCAAAGGACTTCGAGGCTAAGCTCTTTATTTGCC
GTATATGATCAGCATGTATGCCTGAGGAGCCAGTTTATAGGCTTTACTCT
TGGCATATCTTTGATATGTCTGCCCATTGCGACTTCAATTCCAAGTAAAA
TTTCTTTACAAATAACCGCCTTCAAGAAAAATCTTTTGCCATCATTGACG
CACGTCGATAACTATCTTCGGACGAAAACCCCCCCACTTCGCGAAGGGTA
CAGCTCCTTTTGTTATCATTTGATTGTCCCCAACTTTGCTCATTTGAAGG
CGTCGTACCTGAAAATTGTTCCTGAAAACGAGCACTTGATTCGGACCGCA
TACGATGCGAACAGTCCAGAAGATCTTCCTGTCCTGACTCGCTATTTCCC
GGCGTCGGCCGTGAAGGAGATGACGGGTCCCGCCAAGTTCTTGGACGTCA
TTCTGTACACCCGGGAGGAGATTCATCAGGAGAATATAGCCCGTGGCATG
GAGCATTTGAACAACGCGTCCGACGCGCCCTGGGGGATCATGCGCGTGAA
GGCCCAGGACGTGGAGCGGGAGTTACCCATGCTCCCTACCACCCTGATCC
GGAACGCGCTCGGGAAAGGATTTGGGGGCTCGGGGGTGCCCTTGGACGTG
GATCGGTATAAGGAAAGCGTCGGGTTTTGGATGCACCATGCGGCGATTCG
GTAG
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protein sequence of rna8386

>rna8386-protein ID=rna8386-protein|Name=rna8386|organism=Nannochloropsis gaditana|type=polypeptide|length=110bp
SLPFPLSRSQIRAIIDQFSLSELDVSDQGVVSVCSFSTESNQAAAKFIED
MYKDEVKASNTVEFKGPMPEVGTVFRDVEIKGTPSLPLSLPLALCPSLPP
SLPDPAIRLD
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mRNA from alignment at KK037248.1:545112..545481-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8386 ID=rna8386|Name=rna8386|organism=Nannochloropsis gaditana|type=mRNA|length=370bp|location=Sequence derived from alignment at KK037248.1:545112..545481- (Nannochloropsis gaditana)
TCCCTCCCTTTCCCCCTCTCCCGTTCACAGATTCGCGCCATCATCGACCA
GTTCTCCCTCTCGGAGCTGGACGTCTCCGACCAGGGCGTCGTGTCTGTCT
GCTCCTTCTCCACCGAGAGCAACCAGGCGGCGGCCAAATTCATCGAGGAC
ATGTACAAAGACGAGGTGAAGGCCTCCAACACCGTGGAGTTCAAAGGTCC
GATGCCGGAGGTCGGCACCGTATTCCGGGACGTGGAGATCAAGGGTACGC
CTTCCCTCCCTCTGTCCCTCCCTCTGGCCCTCTGTCCCTCCCTCCCTCCC
TCCCTCCCTGATCCCGCAATCCGCCTTGACTGAAACCTTCTCACGTTTAG
GCAATCCCCTCCCGTCCTCC
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Coding sequence (CDS) from alignment at KK037248.1:545112..545481-

>rna8386 ID=rna8386|Name=rna8386|organism=Nannochloropsis gaditana|type=CDS|length=333bp|location=Sequence derived from alignment at KK037248.1:545112..545481- (Nannochloropsis gaditana)
TCCCTCCCTTTCCCCCTCTCCCGTTCACAGATTCGCGCCATCATCGACCA
GTTCTCCCTCTCGGAGCTGGACGTCTCCGACCAGGGCGTCGTGTCTGTCT
GCTCCTTCTCCACCGAGAGCAACCAGGCGGCGGCCAAATTCATCGAGGAC
ATGTACAAAGACGAGGTGAAGGCCTCCAACACCGTGGAGTTCAAAGGTCC
GATGCCGGAGGTCGGCACCGTATTCCGGGACGTGGAGATCAAGGGTACGC
CTTCCCTCCCTCTGTCCCTCCCTCTGGCCCTCTGTCCCTCCCTCCCTCCC
TCCCTCCCTGATCCCGCAATCCGCCTTGACTGA
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Synonyms
Publications