rna8382, rna8382 (mRNA) Nannochloropsis gaditana

Overview
Namerna8382
Unique Namerna8382
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length716
Alignment locationKK037248.1:535504..536247 -

Link to JBrowse

Properties
Property NameValue
Producttp53-regulating kinase
Orig transcript idgnl|cribi|Naga_100118g19.2746.mrna
Orig protein idgnl|cribi|Naga_100118g19.2746
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:535504..536247 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100118g19gene8122Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22319.1cds8355Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8382rna8382-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8382 ID=rna8382|Name=rna8382|organism=Nannochloropsis gaditana|type=mRNA|length=716bp
ATGGAAGAGAATAGCCTGGATAACTTTGAAACAAACCGTGGGGTGGAGAG
GTCTGCAGCAGACAGTAGCAGTAGCGACAGCAGCAGCAGTAGCGACAGCA
GCAGCAGTAGCGACAGCAGCAGCAGTAGCGACAGCAGCAGCAGCAGTAGG
GACAGCAGCAGTAGCAGCAGCAGCAGCAGAAGCAGGAGGAAAAGTAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGTAGAAACCGGGCATCGGAGAGGA
AGAAGCCCTACCAGTGCGACCGTTGTGAGGCCTCCTTTGGGATCGCCCCC
GATCTGAGCGAGCATTTTCACCGGTTGCACGGGGTTACCAAGCACCCCAG
CCAGATCGTGCCCACCGCGGTGATCTTCTAGAAGGGCGGTTCCCAAGCAG
CCACCGGACCCGAGGCCAGGTCTTCCTCCCCACGGGCATCGCCATTTGGA
AGTCCTGTCGTGGTCCAAGCTTCTGTATCGCGCGGAGTGAAATGCCTGGG
AGAGAGAGGCATGAGAGTGGCGGGCAGGTCCAGTCTTGTGGCACGCCTGT
TCGGTGTTGAGGACACGGGAAACCGCCTAGGCCACCGGGAGAGAGGGAGA
ACGTCTAGTCTGATGGGAAAGAGGGAATGTCATGAGTCTGATGGTAGAAG
GGGAAACGTTTAGTCCGATAAACCACAGGGAAAACAACTTGCCCGACGGG
AGGGACAGCCACGCGG
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protein sequence of rna8382

>rna8382-protein ID=rna8382-protein|Name=rna8382|organism=Nannochloropsis gaditana|type=polypeptide|length=247bp
MAVSSSARVDSRSTDGLVLLSQGAEARVFELPSFLGGRPAIVKERFAKSY
RLPVLDAKLTKQRTVGEVRCMLRCAKVGVHAPCVYMVDMQASRIYMERIE
GRSFKAFLRDHFNDATRSYTPAAHELADELGKVVARIHDAEMVHGDLTTS
NVMVMGEEDGKSKAQDVSHRLVVIDFGLGFLQPLPEDKAVDLYVLERAFL
STHPNSEELVDRAMAAYARHSSSHQSKAVLKKLEDVRRRGRKRDMFG
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mRNA from alignment at KK037248.1:535504..536247-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8382 ID=rna8382|Name=rna8382|organism=Nannochloropsis gaditana|type=mRNA|length=744bp|location=Sequence derived from alignment at KK037248.1:535504..536247- (Nannochloropsis gaditana)
ATGGCCGTATCATCCTCCGCCAGAGTAGACTCACGGAGTACGGACGGCCT
TGTTCTTTTGTCTCAAGGTGCTGAGGCCCGAGTTTTCGAGTTACCCTCTT
TTTTGGGAGGTCGCCCCGCTATAGTCAAAGAGCGATTTGCCAAGTCTTAC
CGCCTTCCTGTCTTGGACGCGAAACTGACAAAACAGCGCACTGTGGGAGA
GGTGCGATGTATGTTACGGTGCGCGAAGGTAGGGGTACACGCTCCCTGTG
TCTATATGGTCGACATGCAAGCATCCAGAATTTACATGGAGAGAATAGAA
GGCCGCTCCTTTAAGGCATTTTTACGCGACCACTTTAATGATGCAACGCG
TTCGTATACGCCCGCAGCACACGAATTGGCCGATGAGCTTGGAAAAGTGG
TAGCAAGAATTCACGATGCCGAGATGGTACACGGGGATTTGACCACATCA
AATGTTATGGTCATGGGCGAGGAAGACGGAAAAAGCAAGGCACAAGACGT
AAGTCATCGGCTCGTGGTGATTGATTTCGGCCTAGGTTTTTTGCAACCCC
TGCCTGAAGACAAAGCTGTTGACCTCTACGTACTCGAACGGGCATTTCTT
TCAACGCATCCCAATTCTGAGGAATTGGTAGATCGTGCAATGGCTGCCTA
CGCGAGACACTCATCGAGCCATCAGTCGAAGGCAGTTTTGAAAAAATTAG
AGGACGTTCGTCGGCGAGGTCGAAAACGTGATATGTTTGGTTGA
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Coding sequence (CDS) from alignment at KK037248.1:535504..536247-

>rna8382 ID=rna8382|Name=rna8382|organism=Nannochloropsis gaditana|type=CDS|length=744bp|location=Sequence derived from alignment at KK037248.1:535504..536247- (Nannochloropsis gaditana)
ATGGCCGTATCATCCTCCGCCAGAGTAGACTCACGGAGTACGGACGGCCT
TGTTCTTTTGTCTCAAGGTGCTGAGGCCCGAGTTTTCGAGTTACCCTCTT
TTTTGGGAGGTCGCCCCGCTATAGTCAAAGAGCGATTTGCCAAGTCTTAC
CGCCTTCCTGTCTTGGACGCGAAACTGACAAAACAGCGCACTGTGGGAGA
GGTGCGATGTATGTTACGGTGCGCGAAGGTAGGGGTACACGCTCCCTGTG
TCTATATGGTCGACATGCAAGCATCCAGAATTTACATGGAGAGAATAGAA
GGCCGCTCCTTTAAGGCATTTTTACGCGACCACTTTAATGATGCAACGCG
TTCGTATACGCCCGCAGCACACGAATTGGCCGATGAGCTTGGAAAAGTGG
TAGCAAGAATTCACGATGCCGAGATGGTACACGGGGATTTGACCACATCA
AATGTTATGGTCATGGGCGAGGAAGACGGAAAAAGCAAGGCACAAGACGT
AAGTCATCGGCTCGTGGTGATTGATTTCGGCCTAGGTTTTTTGCAACCCC
TGCCTGAAGACAAAGCTGTTGACCTCTACGTACTCGAACGGGCATTTCTT
TCAACGCATCCCAATTCTGAGGAATTGGTAGATCGTGCAATGGCTGCCTA
CGCGAGACACTCATCGAGCCATCAGTCGAAGGCAGTTTTGAAAAAATTAG
AGGACGTTCGTCGGCGAGGTCGAAAACGTGATATGTTTGGTTGA
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Synonyms
Publications