rna8367, rna8367 (mRNA) Nannochloropsis gaditana

Overview
Namerna8367
Unique Namerna8367
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length3518
Alignment locationKK037248.1:499721..500124 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100118g1.2751.mrna
Orig protein idgnl|cribi|Naga_100118g1.2751
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:499721..500124 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100118g1gene8107Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8367rna8367-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22324.1cds8340Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8367 ID=rna8367|Name=rna8367|organism=Nannochloropsis gaditana|type=mRNA|length=3518bp
ATGGAGGGAGCGGGCGGTGGTGGAGGAGAGGTACGGTTGTGCGGGGCAGC
GATGGCGGTGGGCGTGGGCTCCTTCCATGACCCCGTGGAAATCCAAGGGC
TGGCCCACTACTTGGAGCACATGCTCTTCATGGGCAGCCATAGGTACCCG
GAGGAGAATGCCTACGACGCCTTCCTCTCCCAGCACGGCGGTTACAGCAA
CGCCATGACGGAATGCGAGTACACTGTCTACCATTTTGAAGTTCCCCCTG
CCTCTTTCACGGGGGCTTTGGATATTTTCGCGCAATTTTTTATCGACCCC
TTGATGCGCCCGGAGGCCTCAGCACGGGAGCTGGAGGCGATCGAAAGTGA
GTTCAACCTGAGCCGAAGCAGCGACAGCACCCGTTGGACCCAGCTCATGT
GCCACACCTGCCATGCTTCCCATCCCTATGCGCGTTTTGCCTGGGGGAAC
CTGGCCTCTTTACGGGACGCGCCCCAGGCGGCAGGCTTGGATATCAACGC
CGAGATGCGCCGGTTTTACGGTCAACACTACCGGGCTCCCAACATGAAGC
TTGTCTTGTTGGGCATGGAGGACCTGGACACCCTCGAAAACATCTTGGTC
CGGACCTTCGCGGGCGTACGCGGTTCTTCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCCCCTGCAGGGATTGCCGCCCCCCATGGACGAAAGCAATGCCT
TGGGCTGGTTGTTCCGGATCGTTCCTTTCCGAGACCTGCATGAGCTGCAC
CTGACCTGGCCTCTCCCTTCGCTGCTCAGCCAGTACCGGTCCAAGCCCTG
GGAATACCTGGGCCACCTCCTAGGACACGAAGGTCCCGGGTCCATCTTGG
CGGCGCTCAAGGCCCGGGGAGAGGCCACGGCCATCGTGGCCGGTGTCAGC
CACGAGGGCTATGACTCCTCCACGGGCCTCGCCCTCTTCACCCTGACGGT
GACCCTGACAGAGGCAGGGGTGAGGGCCTGGGAGGAGATTGTCGGCGTGG
TCTATGCCTACTTGGGGGCGATACGGCGGGCCGGGTGGCAACGCTGGGTG
TACGAGGAGCTTGCGGCCATTGCCCGGATGCAGTACACCTATCAGGAAGA
GGTCGAGACGGGGGAGCTGGTGGAGCATTTGGCGGTGGGCTTGTTGCCCA
TGTACGGTTTGGAGCGGACCGAGTTCCTGGAAGCGTTGTTTTTGCTCCGA
GACTGGCGGCCGGAATGGCTCGAGGTGATTTTGGTCGCCTTGTCGGACCC
GACGCGGTGTCGCGTGGACGTTGCCTCGTCCAGGTTCGGACGAGCCGGGG
CCTGGGAGGCCGGGCCCTCCGCGCAGGTCCCCGAGAAGGCGGGAGACGGA
GAAACAGGCGTGATCGAGGGCATTTCCGTCGAGACTGAACCGCGCTTTGG
TGTGCATTTTACCCGGGAACGGCTCGCGCCCCCCACGCTCCAGGCATGGA
AAGACATATTCAACCGGGCGGCTACCGGTGACGCCCTGCCAGGGAACTAC
CCCGCCCTCTTCCTCCCTCAGCCCAACCCCTTCATTGCCACCGACTTGAC
TGACCACACCTTTCGCACCCCTCGCTCTTGCATCTACCTTAAACTTGCCA
CGCCCCATGCGTACGCCTCGGCGCGGCAGGAAGTGATGACGGAGCTTTTT
GTCCGGCTGGTGAAGGAGAGTTTGAATGAAGTCACCTACCTAGCCAGCGT
GGCAGAGCTGCATTATGGCTTGAAAGCCACCGAGCTGGGCCTGGAGCTGA
CTTTCCATGGCCTTTCCGACAAACTCCTCCGCCTTGTGGAGCTCGTCCTC
CGCCGGCTCCTGGTCCGTGAAGGCGGGAGCGAGGGCGGGAAGGAGGACCC
GCTCTTTCCATCGTCCTGTGCCGGCCTTTCCTCCTCCCCCCAGGCCGTCC
GATTCGCGGCCCAGAAAGAGGCCTTGATCCGGGTCTATGCCAACGGAAAC
ATGAAACCGAGCAGGCACGCCCGTAACCTGAGGCTAGGGGTGCTGAAGGA
GAAGATGTGGCAGTGCGAGGAGCTCGAGAGAGAGGCTCGGAGCCTGACGC
TGGAGGCGGTGGCGGCGTTTGCCCCACGCCTGTTGGAGGCGCTGCAGGTG
GACGGCTTGTACCAGGGCAATTGCGATCGTGCCGACGCCCGGGCCCTCCA
AAGCCTCCTCCTCTCCCTCCTCCAGCTCGCCGGCACACGCCCTGTGTCCC
CGGCGGCCTATCCCTCCAACCGGATTGCCGTCCTTCCCCCCGGGCACAAC
CTCCTCCTGGCCGCCGAGAGCGTGGACGCGGGGGAGAGGAACTCGGCCTT
GGAAGCGTATTGGCAGCTTGGGCCGGACACGATCGAACGCCGGGTGGTGG
TGCAAATGCTGGAGAAGCTTATGGAGGAGCCACTCTACGACACCCTCCGC
ACCAAGGAGCAGCTAGGGTACTCGGTTTCCTGCGGGCTCCGGATGACCAA
CGGCATTCTGGGCCTGGCCGTTAAAATCCAGTCTGAGCGTTACGAGCCCG
AGCATTTGCACGCACGTCTGGAGGTGTTTTTACAGAGCTTTCACGCCAGC
ATGTCCACCCTCCCTCCCTCCGTGTACGCCCGTCAACTGGTGGCTTTGGC
TCAGAACAAGCTGCAGCGAGACGCGTCTTTGAACGAGGAAGCAGGCAGGT
ACTGGGCGGAGATTGTGGATCGGCGCTTCCAGTTCGACGTGGGCCCTTGG
GAAGCTCGGCGGCTCTTGAGCGTGAGCCTGGCGCAGGTTTTGGCACTCTT
TGAGGAAAGCGTAGGGGTGAACGCGGAGAAAGCGCGGCATGCGGCGGTGT
ATGTGACGGGGCGGGCGTGCCGGTCTCGGAGGGGTGGAAGGGGAGGGCGA
GAAAAGGAAGGCTTCGCACGGTCGGGCAAAGCAACGGAGGGCGAGGGCGG
GAAAGAAGCGATGGAAGGGACCCAGACGCCCACACAGGCACCGGCAGAGA
CGCCTTTGTCGGATGGAAGCGTGGTAAAGCCTGAAAAGAAGCTCGGCCCT
CTCCTGTTGAGTGCCAAAGTCCGAAGCTTGGCGCGAATCTCTGAGCGCAT
GGGTGGCCCGGTGGCCGTGGATGCGCCCAATGGAGGAGGACATGGAAGGG
AGGGAGGAACGGAACCCGAGTTCTACCCAAATTTGACCTGAAAAGAGCTT
CATTTCGACAAAGTATCCTCCGCGATTGGAAAGAAATGCATCTTGAGAAG
GTGTGTGGGCCACGCGCAAAGCCAAGCCAAGGCTGCCCCAGGACGGACTT
TCCCGCGGACCGCACCGGGACGAGGCCACCGGGCGTCACTTATACCCTGA
TACCAACCCCTTGACCCGATCAACGTGGGACGCTCGGCCTTTTTTGCTTT
TGCTTTACCTTCCCCCCTGCGTGCACTTTCTCACGCTGTCCTCTTCCCAG
TCACACCCGCGTCGGCGCACCTTTTCGCCCGGAGCGGAGGAAATATCGAC
TCAACTCACAACCTTGGGCATACTTTCCGTATAATATGCACAGTCTGCCC
TAAGCCCCAGGGAAGGAC
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protein sequence of rna8367

>rna8367-protein ID=rna8367-protein|Name=rna8367|organism=Nannochloropsis gaditana|type=polypeptide|length=76bp
MNASIASCAPYGSRHHTIGKFAIKRDRNGCRLCKFACAAASQGVVPFESR
WDTSCDGPQALSPRHAGQRPRSIVDS
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mRNA from alignment at KK037248.1:499721..500124-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8367 ID=rna8367|Name=rna8367|organism=Nannochloropsis gaditana|type=mRNA|length=404bp|location=Sequence derived from alignment at KK037248.1:499721..500124- (Nannochloropsis gaditana)
ATGAATGTTGTCTCCATGTTCAGGGAATGCTCTGTATGGCTCTTTTTTCT
TCCAAAAAGACCCAATTTTTCATTTGCTACCTTTCCTTATCGCATTCAGG
CCTCCATAGCTTCGTGCGCTCCGTATGGAAGTAGACACCACACAATCGGC
AAGTTTGCCATTAAAAGGGACAGAAATGGATGTCGACTATGTAAATTCGC
CTGCGCCGCCGCTTCTCAAGGTGTTGTCCCGTTTGAGTCTAGATGGGACA
CGTCCTGTGACGGACCCCAAGCATTATCGCCTCGTCACGCTGGACAACGG
CCTCGAAGCATTGTTGATTCATGATCCCCGCATCACTCCAAGGGCAGACG
ATGGAGAAGAAATCAGAAAGAGACGAATGAAACACAAGGAAGAGGAGGAG
GGGG
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Coding sequence (CDS) from alignment at KK037248.1:499721..500124-

>rna8367 ID=rna8367|Name=rna8367|organism=Nannochloropsis gaditana|type=CDS|length=462bp|location=Sequence derived from alignment at KK037248.1:499721..500124- (Nannochloropsis gaditana)
GCCTCCATAGCTTCGTGCGCTCCGTATGGAAGTAGACACCACACAATCGG
CAAGTTTGCCATTAAAAGGGACAGAAATGGATGTCGACTATGTAAATTCG
CCTGCGCCGCCGCTTCTCAAGGTGTTGTCCCGTTTGAGTCTAGATGGGAC
ACGTCCTGTGACGGACCCCAAGCATTATCGCCTCGTCACGCTGGACAACG
GCCTCGAAGCATTGTTGATTCATGAATGAATGCCTCCATAGCTTCGTGCG
CTCCGTATGGAAGTAGACACCACACAATCGGCAAGTTTGCCATTAAAAGG
GACAGAAATGGATGTCGACTATGTAAATTCGCCTGCGCCGCCGCTTCTCA
AGGTGTTGTCCCGTTTGAGTCTAGATGGGACACGTCCTGTGACGGACCCC
AAGCATTATCGCCTCGTCACGCTGGACAACGGCCTCGAAGCATTGTTGAT
TCATGAATGAAT
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Synonyms
Publications