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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100230g6.2216.mrna |
| Orig protein id | gnl|cribi|Naga_100230g6.2216 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:464130..465949 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8356 ID=rna8356|Name=rna8356|organism=Nannochloropsis gaditana|type=mRNA|length=1500bp
AAAAATACTACGCTCAAATGCATTTTATCGATACGATTTCAAGCTTTCAT
TCCCACCGTGCCCACGCCCACAGCTTATGCCCCGTCCGCATGCCCGGCTT
TCTGCCCATTCCTTGTTTTGTTTGTTGACGGTAGTACGTGCGGCCGGGGC
TTTTCGCCTCGTCTCCCCTTGGGGCAGACGCTACCCTCACTCCACCCGCC
CCATCGCGACCGCTACTCCGACATTCGTTTCAGCTTCCAAGGCAAGGGAC
TTTACCATCCAAATCCCCGACGTGTCCCTGCCAGACGAACCGCTGCGACA
TGTGCGTGTCCTCGACACCGGCCTCCCCTCCTCCAATCCGGGCACTGCCA
GCGTTCCCCCTCCCTTAGTCCTCATCGGTGGTACCGCGCAGACCATCGCC
AGCTGGGTCGGTCATATCCACGGCTTGTCCCGGAAACGTCGGCTCATCGT
TTATGAAACGCGCGGCCAGGGACGCACCACCGATTTGGACCTGTCCGATG
CCTCGCTCGCCGTCCACGTTGAAGACTTTTGCCGTGTGCACGCAGCCCTG
AAGATTGAAGGCCCCGTCGACTTGTGTGGCTTCAGCTTCGGTGGGCGCGT
CAGTCTTGGCGTCGCGGCCCTCCACCCTGGATTGGTGCGACGTTTGGTGC
TGACGGGTGTGCCCGCTGAACGAGATGCAGTGGGACGGCTCATCATCAAG
TCCTGGCGTGCCGCTTTGGACCGCGGAATGCTGCAAGAATTCGTCTGGAA
TTCCATGCTCCATTGTCACGGGGCCGCGTTCTTGTCCAAATATGAATCGA
AGATCCCGGAGTGGGTGGCATTCGTGGAGTCGGCCAACACAGTGGCGGGT
TTGCGGGCCATGGTGGCCCGCAGCCATACCTCCGACGTGGAGGACCCGTA
CCACACCCTCCAGCTGGCTCCACGCGTCGAAGCGCCCACCTTGCTCCTGG
GGGCTTTGGACGACAAGGTGGCCACTGCTTTGGAAATCAAACGGCTGGCA
GAAGCCGGGCGCCGGGGTTGGCCGGTGCACTTCTTCCCCGGGGCCGGGCA
CAATTGTGTGTTCGAGGCGGCCGTCCTATGGCGGGAGGAGGTGCTGGCGT
TTTTGGACGCAGAAGAGGGAAAAGGTGGGAGGGTCTGAGGGAGGGAGGGA
CCTGGTGTGCAGGCTCTTTGCGGGGGGGAAAGGGTGGTATGGTCATGCGA
GAGGACAGGAGGGGAGGGGAAGGGAGGGTTGGCGGGGGGGGGAAGGGGAG
GAGGGAGGCAGGAATGTTGTCTTAATGAGGGACAATGAGGTGTTCTTAGG
GAAGACGGGATGTGATGGGCCGAGGAGGGGTACGTGGGTGGGATGGAGGA
GGGGAAAGAGGCGGGCCCGGGGAGCACCGAGGGAGACCCCGGCACCAGGA
CCTGAAGGCCTGAAAGCTTGTACATAGGCTATTCGTGCACACACAGCCCA
ATCAGTGCATTTTGAAGTCATAAAGCAACGCAAGCAAAGCACAAACTTGG back to topprotein sequence of rna8356 >rna8356-protein ID=rna8356-protein|Name=rna8356|organism=Nannochloropsis gaditana|type=polypeptide|length=122bp
MTGDNIIDLGSRPEALRDVLLDRLLCPLLSRVIYLAHTLTPSQGLSPQAP
GHRKSGAPPSGMFSMLDFNSLRTALEVLVLWGIYPCLDDGVASRRRGRDR
GCCRYSCGTIFTDRTLLSTYIL back to topmRNA from alignment at KK037248.1:464130..465949+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8356 ID=rna8356|Name=rna8356|organism=Nannochloropsis gaditana|type=mRNA|length=1820bp|location=Sequence derived from alignment at KK037248.1:464130..465949+ (Nannochloropsis gaditana)
ATGACAGGCGACAACATAATCGATCTTGGCAGCCGGCCCGAAGCACTACG
CGACGTCTTGCTAGACCGTCTGTTGTGTCCACTGCTTTCTCGCGTCATTT
ATCTGGCTCACACGCTCACGCCTTCACAAGGTCTCTCACCCCAAGCACCG
GGGCACCGGAAGAGCGGAGCCCCTCCTTCGGGTATGTTCAGCATGCTGGA
TTTCAATAGTTTGCGgacggccttggaggtgTTGGTGCTCTGGGGCATCT
ACCCCTGTCTGGACGACGGAGTGGGTAGGCCCTtggagcgaagggaggag
agcaaggcggTGACGCTCCCACCCCCAGTCCTGGCATGGGGTTTGGCGGC
TGTGGCGGCCCCAGGAGAGGGTCGCGGCGGGACGGAGAAAAGGAGCGAAC
GCGAGGggcaagagcaggaggggcaggcgcggTAAGTGGGTGCCTTCCCT
AGGAGAGTATGCCAAAGAGTGCTCTCTTTCGTGGTCGGGGTGGGAGTTTC
CAGTGTCCCTCTGCGTGTGTCAGTCGTACTTGCCTCCAAGGGCGGGCGCC
AAACCCGCCCCCTGGCGTGGAAAGGGCAAGGGATGATGATGCCCCActgc
gtccccccccccctcggaggGCTTCACAAAGCCTCCCGGCGGAGGGGCCG
GGACCGGGGGTGCTGCAGATACTCCTGTGGTACGATCTTCACGGATCGGA
CGCTGCTGAGTACTTATATCCTCTGAATCCTGCCTCGTTGCACTTTCCTT
CACGGCCCGTTACCGCCATGGCACAGCTTGTCGTTCAGGGCTGTGGCTTG
TTCTCTAttaccctttccctcgctttTGTTCGGCTCTTAAGCATCGGGAA
TGTTCGCTtactcttcttccctccctccctcccacaataccctccccctc
cctccctccctccctccctccctccctccctccgccccagaCCTAtccgc
ctgctccgcctcgcccactccctccgGTTCGCCGACATTCTAGAAGCTTC
CATGGAACTCGAGCAGTTCGGCTCTGTTTTCCAAGCCCGGCACATCGCCG
ACCTCTTTGCCCTTtacttctccctccagcaccattcacgctcccttcct
ccctcgccctccaccccgaccGTCTCCCAGCGCCTGCAGGTTCTGTCCAC
TCGCTTCGGTCCCCGCCTGGTCGTCAACggcctccgctccctccttgcct
cccatccgtcctccctccccccgtggCTCCGTCGCGCCTGCGCccatcgc
ctctccctcctcctcctccagccggGAGGGCTCCGGGCCGTCCTGGAATC
CTTCTTGGGGGGCTTGCCCGACACCCTCGAGGCTTTCCCCGCCCATGAGc
aagtcctccgcctcctcacctccctcccctcccacctctccccctccgaa
TACAtcgccggcctcgcccctcagctgccccccctcctccacactcCCGC
CCGGGACCACGGCCGCGTGCagtccttcctcgcttccctcaTCCACCGCC
TCACCCAGCGCTTTCCCTTCGTCACCCgcgacgtcttcctcttcccatgc
CTATTTCAGCCCCTTCTGGTGGAGGAAACcgatgcggaggaggcggacga
ggcgacCGTTGAACGAGCCGTTGAGGATTTGCAGGTCCTGTTAACGGTCA
CACCGCCGTTACCCGCCTTTGTCGAGACGTTGGCagtcccctccttgatc
ttccCCTTGATGGATCTGTACGGCTTCGTCCGGTCGACGCGGGCCCGGGG
CAaagcggaggtggaggcctgcCTTTTGGTGCTTTTGCAAGGGGcgggca
tggagaaggacggagcggga back to topCoding sequence (CDS) from alignment at KK037248.1:464130..465949+ >rna8356 ID=rna8356|Name=rna8356|organism=Nannochloropsis gaditana|type=CDS|length=738bp|location=Sequence derived from alignment at KK037248.1:464130..465949+ (Nannochloropsis gaditana)
ATGACAGGCGACAACATAATCGATCTTGGCAGCCGGCCCGAAGCACTACG
CGACGTCTTGCTAGACCGTCTGTTGTGTCCACTGCTTTCTCGCGTCATTT
ATCTGGCTCACACGCTCACGCCTTCACAAGGTCTCTCACCCCAAGCACCG
GGGCACCGGAAGAGCGGAGCCCCTCCTTCGGGTATGTTCAGCATGCTGGA
TTTCAATAGTTTGCGgacggccttggaggtgTTGGTGCTCTGGGGCATCT
ACCCCTGTCTGGACGACGGAGTGGCCTCCCGGCGGAGGGGCCGGGACCGG
GGGTGCTGCAGATACTCCTGTGGTACGATCTTCACGGATCGGACGCTGCT
GAGTACTTATATCCTCTGAATGACAGGCGACAACATAATCGATCTTGGCA
GCCGGCCCGAAGCACTACGCGACGTCTTGCTAGACCGTCTGTTGTGTCCA
CTGCTTTCTCGCGTCATTTATCTGGCTCACACGCTCACGCCTTCACAAGG
TCTCTCACCCCAAGCACCGGGGCACCGGAAGAGCGGAGCCCCTCCTTCGG
GTATGTTCAGCATGCTGGATTTCAATAGTTTGCGgacggccttggaggtg
TTGGTGCTCTGGGGCATCTACCCCTGTCTGGACGACGGAGTGGCCTCCCG
GCGGAGGGGCCGGGACCGGGGGTGCTGCAGATACTCCTGTGGTACGATCT
TCACGGATCGGACGCTGCTGAGTACTTATATCCTCTGA back to top
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