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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100066g29.10333.mrna |
| Orig protein id | gnl|cribi|Naga_100066g29.10333 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:422093..423903 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8340 ID=rna8340|Name=rna8340|organism=Nannochloropsis gaditana|type=mRNA|length=2107bp
CGGGAGGGCTTCCTCTGCCAAAGCGATAATCCATGCATGAGTAATGGGAT
TTGGTGTACAATCAAACATTTCAATCCTCGGTAACGATATTCTGCCCCTA
TTTTCTCCTTCAGGACGCGATCATTGCGGTATTTGTTTTAGAGCTCTTAG
ACCTCGAATACGCTGCAAATACAGAGTAATTTGTAATCTTTCGCGCAACA
ATTGGGAATCCTGCAAAAAATATGATATCATCTATGGTTTTCCTGCTCGT
GGTATTGGCCATGGATCCCGCATGTGGCTTCCTCTCCCCCATGGCTCGAC
CAACGACACCATTGAGTTTGCACGTGAGCACTGCCCCTGCAGACGACAAA
TCCGTCTCCATTACCACAAAAGAACCCTTTGGATTCAGGACGAAGAGAAT
TCTGGATAAGATCGGCGCGGATGCGGATGCTTCAGGGGGTGCGGGATCGT
CAATTTCCTTCACGACCCTGGAGGCGATAGACCGCGCTTGGGAGGCCGTT
AAAACAGGTCGGGCTTCGGGGGAGGCTCCCACTTTCGTACGGGAGACCGA
TGTTCCCTTATCTACATCCCCCAAATTCGATGTAATCGTTGCGGGAGGTA
CGTTGGGGATTTTTATGGCAACAGCTTTGCAAAGAAAAGGTTTTCGTGTT
TGCGTTGTAGAGCGCGGACCCTTGCGGGGTCGGACGCAGGAATGGAATAT
TTCTCGAAAAGAAATGATGGAATTGGTAGAGGAAGGAGTGCTTAGCAAGG
AAGATGTAGAAGACGCAATCGGTATCGACTTCAACCCTATCCGTGTGGGT
TTCGTGGGCGAAAAAAATGAGCCGTACACTCTATGGACGCAGGACGTGCT
GCACCTCGGCGTCTCTCCCTCTGTGCTGCTGGCTCGGGCTCAATCTCGGT
TTCTGGCCGCAGGAGGCGTCGTGCACGAAAACACCCCAATCCAAGGCATC
CGGATTGCGCCTAATGGGGCGGCGGTGGAGGTGAAGAGCACAGAAATGAT
GGGCGGTGAAGAGCTCACGGGGCGCCTTGTGATAGACTGCATGGGTAATC
AGAGCCCTATCTCGCGTCAGGCACGGGCAGGGCAACAACCCGACGGCATT
TGTATCGTGGTGGGCACATGTGCATCTGGATTTGACCCGGCCCGGAACAC
CTACGCCGACTTGCTGTACAGCAACACTCCTACCATGGACAAGGGGGTCT
CCCAAGTGCACTGGTTCTGGGAGGCGTTCCCTGCGTCCTCGGGACCCGGC
GACAGGACTACTTACTTATTCATGTACTGCGACGCCAAGCCGGAGCGACC
GTCGATCCTGGAATGCTTCGAGGATTATTGGGACTTAATGCCTCAGTACC
AGAACCTTTCGAGCCTGGACGCGCTCACCTTCAAACGCGCCGTCTGCAAT
TTCTTCCCCACCTACAAGGACAGCCCCCTGCGGACCGACTTCCCCCGACT
CTGCGCCATCGGTGACGCCTCAGGCATCCAATCCCCCTTGTCCTTTGGCG
GGTTTGGCTCCTTAAGTCGCCACCTTGGCCGCCTGACCACCGCTTTTTCC
GACGCTTTGGCCACGGACTCTCTCTCGAAAGAGGAGCTCGGGCTCATCAA
TGCCTATCAACCCTCCCTGTCCGTCACCTGGATGTTCCAACGGACCATGA
GTGTGCCTGTCGGAGCCAAGCCCCGGCCTGACTTCATCAACCGCTCGCTG
ATCAACAACTTCAAATCCATGGAGAAGCTCGGAGACCCGGTCCTGAAGCC
CTTCCTGCAGGACGTGGTGCAAGCTGGCCCGCTCTTCTCAGCCATGGCTG
GCATCGCCCGCCAGGACTTCTTCAACACCCCCACCGTCCTCTGGCACGTG
GGCGCGGACGCCTTCTTTGGATGGTTCCGTCATTTTTTCATGCTCTGCGT
GTATACTCTCCTATACCGTGCCACGAAACAGACCAAAGGCACGGAGGCCC
TGCCCCCGAAGATAAGGTACCGATGGGACAGACGGGTGGAGAACTGGGAG
TTCGGCTCCGGGTTGGATTATCGGTTGTAAGAAAGGAGGACTCTTGGCGA
GGTGTATTGCTGTAAGATACAAATGTACGAACCGAGAATCAAGGGGCAAG
TCCCCGC back to topprotein sequence of rna8340 >rna8340-protein ID=rna8340-protein|Name=rna8340|organism=Nannochloropsis gaditana|type=polypeptide|length=561bp
MTTAYAGAALRWAFQTLDLRNEVVGVMEEMLSTIEHWKLVNDMENIRMQL
QHERAEVSRLQKAVQQLEASEAQHTADAQALRSTARRARDQFVGNLVLIS
KQLCATQEQAKAEVAASTRVRALEQELQQSKLALLRAQQGLKRIGENDQS
ADIEAGKEERLKNENVNIGERDMAGRKPPGTTRATVCPPLTSPQPVSPPA
SDSCISLTVLGEPLILRIFSFLNAPDVLAVSEVCQTWHSRIGAMFGGEEH
GAREEEEEGQDAWRSAENAMPLSETRREMSRGSESGLPLPVAPSSSSSFL
KSYGHRLLGGQAADVLSSSLSSLLPPPSRAAATARSLLGSSDGGSGASAG
GSSRGPVLSERVAASLSSKLSSAELKSILALTERVKKMESLVAQFQVENQ
DARARLEGADVAHRLVLEKLKEAETEATLAREREQAAIRQRDSDQEVIGF
LDGRVQDLEKGLERTVARLGAVNEEATRDKMQLQDQVRVLQDLLNFERRK
AEEDKAQWREHKRILAKEVKSLRGEVVMRQKERDEYRDEARYLRVGGGSW
GRNGFSGLNNK back to topmRNA from alignment at KK037248.1:422093..423903- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8340 ID=rna8340|Name=rna8340|organism=Nannochloropsis gaditana|type=mRNA|length=1811bp|location=Sequence derived from alignment at KK037248.1:422093..423903- (Nannochloropsis gaditana)
ATGACTACAGCCTACGCCGGAGCCGCCCTGCGGTGGGCTTTTCAAACGCT
AGATTTGCGAAATGAGGTGGTCGGTGTCATGGAAGAAATGCTGTCGACAA
TCGAGGTACGTCTCATATTATTAAGATTGCATTTAAAACGAGTAGATTGA
GATTAGGCCTGAAGAGGCGTACGGACACAACCTGGGAGAGTGGGCTTTTC
TAATACCCCCCCTGACGATACGCACACCAGCATTGGAAGCTTGTCAATGA
CATGGAAAATATCCGCATGCAACTGCAGCACGAGCGTGCAGAAGTCAGTC
GTTTGCAAAAAGCAGTCCAGCAGCTCGAAGCCTCAGAGGCCCAGCATACC
GCGGACGCGCAAGCTCTACGGTCCACAGCGCGACGTGCACGGGATCAATT
TGTTGGCAATCTGGTGCTCATCTCCAAGCAACTATGTGCTACACAAGAGC
AGGCAAAAGCTGAGGTGGCGGCTTCAACGAGGGTGCGTGCCTTGGAACAA
GAATTGCAACAATCGAAGCTTGCTTTGCTGAGAGCGCAGCAAGGCCTCAA
GCGGATAGGGGAAAACGATCAATCTGCGGACATAGAAGCGGGCAAAGAAG
AGCGTTTAAAAAATGAAAACGTTAATATCGGGGAAAGAGACATGGCGGGT
CGGAAACCTCCGGGTACCACGCGCGCCACCGTCTGCCCCCCCTTGACCTC
TCCACAGCCCGTCTCCCCGCCTGCCTCCGACTCCTGTATCTCGCTGACCG
TCCTGGGCGAACCCTTGATCCTCCGCATCTTCAGCTTCTTGAATGCACCC
GACGTGTTGGCCGTGTCGGAGGTGTGCCAGACGTGGCACTCTCGAATCGG
CGCCATGTTCGGCGGCGAGGAACACGGGGCCCGGGAGGAGGAGGAGGAGG
GGCAAGACGCATGGAGAAGCGCCGAGAATGCGATGCCTCTGTCCGAAACA
AGGAGAGAGATGTCTAGAGGAAGTGAAAGTGGCCTCCCTCTGCCCGTGGC
GCCCTCGTCTTCGTCCTCGTTCCTGAAGAGCTACGGGCATCGGCTGTTGG
GGGGCCAGGCGGCAGACGTTCTGTCTTCCTCCCTTTCGTCCCTCCTGCCA
CCGCCGTCACGCGCTGCCGCTACTGCACGTTCCCTGCTTGGGTCGTCCGA
TGGCGGCAGCGGTGCCAGCGCGGGAGGAAGCAGCCGCGGACCGGTCCTCT
CGGAACGGGTGGCCGCCTCCCTCTCCAGCAAGTTGTCGAGTGCGGAGCTA
AAGAGCATTTTGGCACTCACGGAGCGTGTGAAAAAGATGGAGTCCTTGGT
GGCCCAGTTTCAAGTAGAAAATCAGGACGCTCGGGCACGGTTGGAAGGGG
CAGATGTGGCGCATAGGCTAGTGCTGGAAAAGCTCAAAGAGGCGGAGACG
GAAGCCACATTGGCCCGTGAACGGGAGCAAGCCGCGATACGACAGCGGGA
CTCCGACCAGGAAGTAATTGGTTTTCTGGACGGGAGGGTGCAGGACCTGG
AGAAAGGTTTGGAGAGGACGGTGGCCAGGCTGGGGGCGGTCAATGAGGAG
GCAACACGCGACAAAATGCAGCTGCAAGATCAAGTGCGTGTTTTGCAAGA
CTTGCTCAACTTTGAACGACGTAAAGCTGAAGAGGACAAGGCACAGTGGC
GGGAGCACAAGAGGATACTGGCTAAGGAAGTAAAGAGTCTACGAGGTGAG
GTGGTGATGCGGCAAAAAGAGCGAGACGAGTATCGTGATGAGGCGCGGTA
CTTAAGGGTTGGTGGCGGGAGCTGGGGTCGAAATGGGTTCAGTGGATTGA
ACAATAAATAA back to topCoding sequence (CDS) from alignment at KK037248.1:422093..423903- >rna8340 ID=rna8340|Name=rna8340|organism=Nannochloropsis gaditana|type=CDS|length=3372bp|location=Sequence derived from alignment at KK037248.1:422093..423903- (Nannochloropsis gaditana)
CATTGGAAGCTTGTCAATGACATGGAAAATATCCGCATGCAACTGCAGCA
CGAGCGTGCAGAAGTCAGTCGTTTGCAAAAAGCAGTCCAGCAGCTCGAAG
CCTCAGAGGCCCAGCATACCGCGGACGCGCAAGCTCTACGGTCCACAGCG
CGACGTGCACGGGATCAATTTGTTGGCAATCTGGTGCTCATCTCCAAGCA
ACTATGTGCTACACAAGAGCAGGCAAAAGCTGAGGTGGCGGCTTCAACGA
GGGTGCGTGCCTTGGAACAAGAATTGCAACAATCGAAGCTTGCTTTGCTG
AGAGCGCAGCAAGGCCTCAAGCGGATAGGGGAAAACGATCAATCTGCGGA
CATAGAAGCGGGCAAAGAAGAGCGTTTAAAAAATGAAAACGTTAATATCG
GGGAAAGAGACATGGCGGGTCGGAAACCTCCGGGTACCACGCGCGCCACC
GTCTGCCCCCCCTTGACCTCTCCACAGCCCGTCTCCCCGCCTGCCTCCGA
CTCCTGTATCTCGCTGACCGTCCTGGGCGAACCCTTGATCCTCCGCATCT
TCAGCTTCTTGAATGCACCCGACGTGTTGGCCGTGTCGGAGGTGTGCCAG
ACGTGGCACTCTCGAATCGGCGCCATGTTCGGCGGCGAGGAACACGGGGC
CCGGGAGGAGGAGGAGGAGGGGCAAGACGCATGGAGAAGCGCCGAGAATG
CGATGCCTCTGTCCGAAACAAGGAGAGAGATGTCTAGAGGAAGTGAAAGT
GGCCTCCCTCTGCCCGTGGCGCCCTCGTCTTCGTCCTCGTTCCTGAAGAG
CTACGGGCATCGGCTGTTGGGGGGCCAGGCGGCAGACGTTCTGTCTTCCT
CCCTTTCGTCCCTCCTGCCACCGCCGTCACGCGCTGCCGCTACTGCACGT
TCCCTGCTTGGGTCGTCCGATGGCGGCAGCGGTGCCAGCGCGGGAGGAAG
CAGCCGCGGACCGGTCCTCTCGGAACGGGTGGCCGCCTCCCTCTCCAGCA
AGTTGTCGAGTGCGGAGCTAAAGAGCATTTTGGCACTCACGGAGCGTGTG
AAAAAGATGGAGTCCTTGGTGGCCCAGTTTCAAGTAGAAAATCAGGACGC
TCGGGCACGGTTGGAAGGGGCAGATGTGGCGCATAGGCTAGTGCTGGAAA
AGCTCAAAGAGGCGGAGACGGAAGCCACATTGGCCCGTGAACGGGAGCAA
GCCGCGATACGACAGCGGGACTCCGACCAGGAAGTAATTGGTTTTCTGGA
CGGGAGGGTGCAGGACCTGGAGAAAGGTTTGGAGAGGACGGTGGCCAGGC
TGGGGGCGGTCAATGAGGAGGCAACACGCGACAAAATGCAGCTGCAAGAT
CAAGTGCGTGTTTTGCAAGACTTGCTCAACTTTGAACGACGTAAAGCTGA
AGAGGACAAGGCACAGTGGCGGGAGCACAAGAGGATACTGGCTAAGGAAG
TAAAGAGTCTACGAGGTGAGGTGGTGATGCGGCAAAAAGAGCGAGACGAG
TATCGTGATGAGGCGCGGTACTTAAGGGTTGGTGGCGGGAGCTGGGGTCG
AAATGGGTTCAGTGGATTGAACAATAAATAAATGACTACAGCCTACGCCG
GAGCCGCCCTGCGGTGGGCTTTTCAAACGCTAGATTTGCGAAATGAGGTG
GTCGGTGTCATGGAAGAAATGCTGTCGACAATCGAGCATTGGAAGCTTGT
CAATGACATGGAAAATATCCGCATGCAACTGCAGCACGAGCGTGCAGAAG
TCAGTCGTTTGCAAAAAGCAGTCCAGCAGCTCGAAGCCTCAGAGGCCCAG
CATACCGCGGACGCGCAAGCTCTACGGTCCACAGCGCGACGTGCACGGGA
TCAATTTGTTGGCAATCTGGTGCTCATCTCCAAGCAACTATGTGCTACAC
AAGAGCAGGCAAAAGCTGAGGTGGCGGCTTCAACGAGGGTGCGTGCCTTG
GAACAAGAATTGCAACAATCGAAGCTTGCTTTGCTGAGAGCGCAGCAAGG
CCTCAAGCGGATAGGGGAAAACGATCAATCTGCGGACATAGAAGCGGGCA
AAGAAGAGCGTTTAAAAAATGAAAACGTTAATATCGGGGAAAGAGACATG
GCGGGTCGGAAACCTCCGGGTACCACGCGCGCCACCGTCTGCCCCCCCTT
GACCTCTCCACAGCCCGTCTCCCCGCCTGCCTCCGACTCCTGTATCTCGC
TGACCGTCCTGGGCGAACCCTTGATCCTCCGCATCTTCAGCTTCTTGAAT
GCACCCGACGTGTTGGCCGTGTCGGAGGTGTGCCAGACGTGGCACTCTCG
AATCGGCGCCATGTTCGGCGGCGAGGAACACGGGGCCCGGGAGGAGGAGG
AGGAGGGGCAAGACGCATGGAGAAGCGCCGAGAATGCGATGCCTCTGTCC
GAAACAAGGAGAGAGATGTCTAGAGGAAGTGAAAGTGGCCTCCCTCTGCC
CGTGGCGCCCTCGTCTTCGTCCTCGTTCCTGAAGAGCTACGGGCATCGGC
TGTTGGGGGGCCAGGCGGCAGACGTTCTGTCTTCCTCCCTTTCGTCCCTC
CTGCCACCGCCGTCACGCGCTGCCGCTACTGCACGTTCCCTGCTTGGGTC
GTCCGATGGCGGCAGCGGTGCCAGCGCGGGAGGAAGCAGCCGCGGACCGG
TCCTCTCGGAACGGGTGGCCGCCTCCCTCTCCAGCAAGTTGTCGAGTGCG
GAGCTAAAGAGCATTTTGGCACTCACGGAGCGTGTGAAAAAGATGGAGTC
CTTGGTGGCCCAGTTTCAAGTAGAAAATCAGGACGCTCGGGCACGGTTGG
AAGGGGCAGATGTGGCGCATAGGCTAGTGCTGGAAAAGCTCAAAGAGGCG
GAGACGGAAGCCACATTGGCCCGTGAACGGGAGCAAGCCGCGATACGACA
GCGGGACTCCGACCAGGAAGTAATTGGTTTTCTGGACGGGAGGGTGCAGG
ACCTGGAGAAAGGTTTGGAGAGGACGGTGGCCAGGCTGGGGGCGGTCAAT
GAGGAGGCAACACGCGACAAAATGCAGCTGCAAGATCAAGTGCGTGTTTT
GCAAGACTTGCTCAACTTTGAACGACGTAAAGCTGAAGAGGACAAGGCAC
AGTGGCGGGAGCACAAGAGGATACTGGCTAAGGAAGTAAAGAGTCTACGA
GGTGAGGTGGTGATGCGGCAAAAAGAGCGAGACGAGTATCGTGATGAGGC
GCGGTACTTAAGGGTTGGTGGCGGGAGCTGGGGTCGAAATGGGTTCAGTG
GATTGAACAATAAATAAATGACTACAGCCTACGCCGGAGCCGCCCTGCGG
TGGGCTTTTCAAACGCTAGATTTGCGAAATGAGGTGGTCGGTGTCATGGA
AGAAATGCTGTCGACAATCGAG back to top
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