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Properties
| Property Name | Value |
| Product | cirhin |
| Orig transcript id | gnl|cribi|Naga_100067g20.2698.mrna |
| Orig protein id | gnl|cribi|Naga_100067g20.2698 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| KK037248.1 | supercontig | KK037248.1:321017..324236 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8302 ID=rna8302|Name=rna8302|organism=Nannochloropsis gaditana|type=mRNA|length=3438bp GATGATGATCGGGCGGAGCAAGCACCATGCTTTTCTCTCTCATCTTCACG TGTTGTCATGAATATCATCCTTATGCCAGAACAGGGCTTACAGGTCCATG CGCGTGTTGCGTGGCGGTGCACTCTCGGAAAAGCCACATTGGGGACATAA TTTGACGATCAGGATTGCTGGCAGCGAAACATGAACGGGCCCCCGTATTT TGGTCCGCCGCGTGGCATGTGAGTCCTTGGGGGGGTGGCAGCGTGTTAGG GTTTCCATGTCCCTTCACTTACGCGTACGCCCCTCACGTTGTGCATGGGC TGCCTCTGGTGTGCTGTGAAATCATTCTGCCTCGTCAAAGCGTGCCATGG ACCAACTTGTGTCCCGGTGGACTTCCGCCTGCACACCCGCCTGACATCGT GATGTTCCCGACACCTCCCCCTCATCGAAAAATCCTTTTCGAGCAGGTTC AGCTCGCATTTACATATTTAATTCTCCATTATGGTACACTTTACTCTATA CACAGGCACGGTGGCCCGCCTCCAATGAATCACCCACCTCCGATGATGAT GGGTGGGCCCGGTGGCTTCCCCCCCCCCGGTTACGGCATGCTCCCCCCGC CACGCCCTGGCTTCGGCCCTCCCGGTAGCGCTCTTCTGCCCCCTCCAACG GTCATACAAGCCCCTATGGGAGGCCTTCCCCCCCTCCCTCCCCCGGTCAT GGCCACCCCTGCAGTCCCGCTCCCCCCCGCCGAGGACCCGGCCAATTGGA CCGAGCACGCGGGTCAAGACGGGAAGACATACTATCACAACCGTGTCACA AAAATCAGCACATACGATAAACCAGCTTGCCTAGAACCTCCCCGCAAGCC CGCGCCTGTGCCCCCGGGGCCCCCGCCCTCTCTCCCGCCGTGCAAGTGGA AGGAGTACACGACGCCGGAGGGGAAGACATATTACAGCGACGGCAAGGAG TCTCTGTGGGAGGAGCCGGCTGAGCTCAAGGCGCACAAGGCGGAGCAAGC GGCGCTGGACGCGGGGGAGGTAGAGGTGGTGGTTGGCTCGGCCGCCGCCT CCCTCCAGGCCCAGCAGAAGGCGGCGGTGGAGACGATCGAGATCTTGGAC GACGGGGCCTCGGACGAGGAGGTCGGGAAGGCGGGCCGGGCGGGCACGAA CGGGGTAGCGGCCGCCAAGAGTGGCTTGGCGGCAGTCGTCTTGAAGGCGG CTGTCAAGCCCGAGCCTCCCGACGAGAGGGATGGCCCCCCCAGCTTCGGC ACTACCGAGGAGGCCGTCGCCGCCTTCAAGCAGATGCTCTACGACAAGGG CGTGAGCAGCACGGCCAAATGGGCCGACATTCCCAAGATGCTGAGCAAAC AGCCCGTGTGGAGCGCCTTGAAGACGGGGGAGAAGAAGCAGGCGTTCGCA GAGTACCAGACCAAGCGGATGAAGGAGGAGAAGGAGGAGAAGCGGGCGCG GGCCCGGAGGGCACGGGACGGCTTTTTGAAGATGCTGGCGGAGTGCGTGC AGATCGACTCCCAGTCACGCTGGCAGGAGGCGGAGGAGCTGCTCAAGGAG GATCCCCGGTTCAAATCCTCGGAGCTGGCGCTGCACGACAAGGAGGACGT CTTCCACGACTTTGTCACCGAGTTGGCTAAGAAGGAGAAGGAGGAGAAGC GCCTGAACCAGAAGGCGTTCGCGGGCTTGCTTCGACGCTACGCGGGCTTG TCGCCCCCAGGGGAGGGGGAGGAGGGGGCGGCGGAATCAGGGGAGGAGGG GCCGGCGTTGAGGCGGGGTATGTCGTGGCGGGAGGCTCAGGCGGTCTTGG ATGTAAGGGCGCGCGGGGAGGAGGAAGGTCGGTTGCGGGAGCTGGTGGAA GAGGTGGATCAGAAGCATGCCTTTGAAGACGTGCTGGAGGAGCTGGAGGT GGCCCACCGGGAGCAGAAGCGCTTGGAACGGGAAGAACGCCGGAAGTTGG AGGAAGGGCGTCGGCGGGCGTTTCGGGAGGTGTTGGAGGGGCTGGCGGAG GACGGGGTGGTGGACATGAGGAGCCGATGGAAGCACTTGAAGCCCGTGAT TGAGAAGGAGGACGCCTACAAGGTGATGATGGGACAGGGAGGCCTGACCG CCGCGGAGTTGTTCGAAAGGTTCGTGGACGATTTGAAAGGGAGGTACGCG GAGGACAAGCGCCGGCTGAGGGATTACTTACCGCGGGCGGGGGCGGAGGT GACCGCGGAGTGGGACCAGGAGACGTACGTGAATGCCATCCTGAAGGCCT TGGGAGGAAAGACGGAGGGGAAGGAGGAGCGGGAGAAGTCGGAGGAAGAG GAGGAGGAGGAGGATAGCGGGGCGGGGTCTAGGGGCTTGGAGAGTGGGAG GCGGACCTCGCGGCGCCTGCAGGAATTCAAAGAGATGTTTGCTCGTCGGC CCAAACACGTGGAGGCGGCTTTCGAGGAGCTGCACACGAGGGCAGTGGAG ATGCGGGAAGAGGAGGCGCGACGGCGGGAGAAACGACGGTGCCGGTACCG GGACCTTCTGCTGGAATACTACTGGCGCTCGGACCACGTGGACGTGACGT GGGCGGAGGCGCAGGAGGACTTGGAGAGGCACTCTGCCTACAACGACTTG GAGCCGGAGGAGAGGAAGGCCTTGTTTGAGGAGCACATGGCCATGCTGCA GGCCAAGATGGAGAAGAAGAAGAAGAGCCAGAAGGAGCTTCTCCAATCCA AGGAGAGGGAAAGGGAGAGGGAGAAGGACATTGGGTCGGAGAAAGGGAAA GAGAGTAGTGGTGGCAAGGCGGCTCCGAAGAAGAAGCACGAGGAGAGCAG TGGCAGTGACAGCAGCAGTGAGAGCAGCAGCAGCAGTAGCTCCTCTTCTT CCTCCTCCTCTTCCTCGGACGATTCCTCCTCGAACCAGTCGGACTCGGAA GGCGAGGCTGGGCATGGCGGCAAGCTCAAGAGCGGTTCCCGAAGCGGCGG AGGAGCGAAAGGGAGGGGCCGGAGTGACAAGAAGGGAGCCGTGAAAGCGA GCAAGAAAGCAGGGAAGAAGGAGCCCAAGGAGAGGAGGAAGCGAAGACGC GGAGGGTCGGATGACGGAGAAGGACAGGATGGGAGGGGCACCAGGAAGAA CCGAAGCCGGTCTAGGAGCCGTAGCCGTCAGAAGCCGGGTCGAAGCCGTT CCAGGTCGCGGTCGCGCAGTAGAAGCAACGATCGTGCTGGCAAGCGGAAA AAGAAGGCACGCGCCCGCAGTGGGAGTCGATCGGATTGAAAGATGCGTGT TTACGGGTGAACCAGTGTAGGAAAGCACACGTGCGGTGTCTCCACGCATG TAAGGGTTCATACTGGATCCATGCCGCAAAAGAAAATTGGAAGCTGCACC TCAGGCTTGAAAGTGTTCTCTTCTCTGAAGACTAACGTGATGCTTAATCT TTTCTTCCCGATCTGTGAGGACGGCAAAGATGTCTGGC back to topprotein sequence of rna8302 >rna8302-protein ID=rna8302-protein|Name=rna8302|organism=Nannochloropsis gaditana|type=polypeptide|length=884bp MVSALHNPPETPDKKADGAIAAAVGAGGLSFHPAAGQEGTAGRAAMTPRG EEEDIEGRQLMAKRRDQHLLYIHRCRFLDWEPRAIVCMAACASGRMLAVA RESGEVEIRLVDEKFRVAGVVPVPGGNGLIRSMTWSRQVSESQGRLFVGS LDTSVFEIDVPGLRVRRRQDSYGGPVWCLAADPHRDLLAVGCEDGSVKLF STADQGFEFSRALPTVNSRILSMAWQAPPSPRDSPSLFVGAVDGTIRHLD ARTGHSAYRMTVEAKNSAHPPLVWSLLALSDGTLVSGDSLGAVHFWDGAM GALKQSFWVHEADVLALAASAAGDTVFASGVDSKLVCLRRPSQAGAREPP GAPEDEAWVLAASNRAHSHDLRALAVVERSGGRGGEGRRSSLLVSGGVDT KLCTYSVASFAHNRPRYIAPYPYYPVASVASARGRRLLMMQHSRKLQLWG LGGFQEETALCLQHEPSPLLEIQAVKGQLIVSSSLSPDGRFLAYATTGTL RVLALEVGESEGGGAEVDRGGDGHARPRVLLRRNKLPALAGRGGEKDVKA LCFSPDSRSLVVGTGGGRVLRAGLKGSLVEEAIRDTSLESEEEQGVVRLS CSQDGRLLAVGRWNGDVELYAVPASSSGEDTGSLSLTWRLPRLDSAPTAL AFHPETDILVVACVSNRFYVFDAAGQRLTDWSQDMGHRLPRELLDRHDCI VGVCFNPDSPQAVVLYGFGFVCYVDLGRPPGQLVQILPASHPAALAQRAS TRKRQHEWLPTRKQKKQRGEAEIAQVSSNKVIQAIEDNDMGGTHGRRRSR GDSLVQEAEERSLPPGSDVSEQLNGKMVKEDDGNDSWNFKMHLGYQGVVA VEALGPDELLLVEEPWIKIVSKLPDVLHRHRYGT back to topmRNA from alignment at KK037248.1:321017..324236+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8302 ID=rna8302|Name=rna8302|organism=Nannochloropsis gaditana|type=mRNA|length=3220bp|location=Sequence derived from alignment at KK037248.1:321017..324236+ (Nannochloropsis gaditana) TGTAGCGCGCACCCACCACATAACAACCGCGTTGGTGTATAACAACCTCT
CCGCGAGGGCAATCCATTACCAACCGAAATTGGCTTTTGTATCGTTCCTA
AGAAAGTGacatcctctctcccgcgaAGCAAGAACAAGGCGAGTGtctcc
agcctcctccattcccttgcCCATATACTTACGTCCCTGGAATTACCGGG
ATATCCCAGCTCTGGTACGGGTGACGCATTGGTGTGGTGCTGATGATTCT
GAACTATACCGTTGAGCCGTCAAGGATAGGTCTGAACGAGATGATTTGGT
CGAGCCCTTACTAAAGAGGGCCGGTCACTAGTATCTTCCAACACGTTTAA
CGCCTGTCCTTCATTTTTCCCATGTTTCTTACGTTTATGAGATAGATGGT
TTCGGCGCTCCATAATCCGCCTGAAACACCCGATAAAAAGGCGGACGGTG
CGATTGCAGCAGCCGTAGGGGCTGGAGGGTTGTCATTTCATCCCGCAGCA
GGTCAGGAAGGCACGGCGGGTCGAGCTGCGATGACGCcgagaggcgagga
ggaggatatcGAAGGAAGGCAGCTAATGGCGAAAAGGAGGGATCAGCATC
TATTGTATATTCATAGGTGCCGCTTTCTCGACTGGGAGCCTCGCGCTATC
GTATGCATGGCCGCGTGCGCATCAGGACGGATGCTTGCTGTGGCCCGGGA
AAGCGGGGAAGTTGAAATTCGCCTGGTCGATGAAAAGTTTCGAGTGGCAG
GTGTTGTGCCCGTACCTGGAGGAAACGGGCTCATTCGCAGCATGACATGG
TCGCGGCAGGTCTCTGAATCCCAGGGGCGCCTTTTCGTCGGGAGCTTGGA
TACGTCGGTATTCGAGATCGACGTGCCAGGCCTGCGGGTGCGGCGCCGGC
AGGACTCCTACGGCGGCCCCGTCTGGTGCCTGGCGGCGGACCCTCACCGT
GACCTCCTGGCCGTTGGCTGTGAAGACGGCTCGGTCAAGCTGTTCAGTAC
CGCGGATCAGGGCTTCGAGTTCAGCCGGGCCTTGCCGACCGTGAACTCTC
GGATCCTCTCCATGGCCTGGCAagccccgccgtctcccagGGACTCCCCC
AGCCTCTTTGTTGGCGCTGTGGACGGGACGATTCGCCACCTGGATGCCCG
GACAGGCCACAGCGCGTACCGGATGACGGTGGAGGCCAAGAACAGTGCGC
ACCCGCCCCTGGTCTGGTCCCTGCTGGCACTTTCCGACGGGACCCTCGTC
AGCGGGGACTCGCTGGGCGCCGTCCATTTCTGGGACGGGGCTATGGGCGC
GCTCAAGCAGTCGTTCTGGGTCCACGAGGCCGACGTgctggccctggcgg
cgaGCGCGGCCGGCGACACTGTCTTCGCCTCGGGCGTGGACAGTAAGCTG
GTCTGCCTCAGGCGTCCTTCCCAGGCCGGGGCCCGAGAGCCTCCAGGGGC
GCCAGAGGACGAAGCCTGGGTCCTGGCCGCCTCTAACCGGGCCCACAGCC
ACGACCTTCGCGCCCTGGCGGTGGTCgagaggtcgggggggaggggaggc
gaggggcgcCGGTCCTCTCTCCTGGTCTCGGGGGGGGTGGACACCAAGCT
TTGCACGTACTCGGTCGCCAGTTTCGCGCACAACCGGCCCCGGTACATTG
CCCCCTACCCTTACTACCCCGTGGCGAGCGTGGCCTCTGCCCGTGGGCGC
CGCCTTCTCATGATGCAGCACAGCCGAAAGCTCCAACTctggggcctggg
agggtttcaggaggagacggcacTGTGCCTACAACACGAGCCATCTCCCC
TACTTGAAATCCAAGCGGTCAAGGGGCAGCTGATCGTGTCGtcgtcgctc
tcccccgACGGCCGCTTTCTGGCCTACGCGACGACGGGAACACTGCGGGT
CCTTGccttggaggtgggggagagcgagggggggggggcggaggtagACA
GAGGGGGTGACGGACACGCCCGGCCCCGTGTTCTCTTGCGTCGAAATAAG
CTACCTGCcttggcagggaggggcggggagaaagacgtCAAGGCCTTGTG
CTTTTCCCCCGACTCGAGAAGCTTGGTGGTGGGcacaggtggaggacggg
tgCTGAGGGCGGGCTTGAAGGGaagcctggtggaggaggctatCCGAGAC
ACGTCATtagaaagcgaggaggaacagggggTGGTACGGCTGTCGTGCAG
CCAGGACGGGCGGCTGCTAGCGGTGGGGCGGTGGAATGGGGACGTGGAGC
TGTACGCAGTCCCTGCGAGCAGCAGcggggaggacacgggctccctttct
ttgACCTGGCGACTCCCTCGACTGGACTCGGCCCCGACGGCGCTGGCCTT
CCATCCTGAGACGGACATCCTGGTGGTCGCCTGCGTGTCAAACCGATTCT
ACGTCTTCGACGCCGCCGGGCAAAGGCTCACGGACTGGTCTCAGGACATg
ggccaccgccttccccgggAGCTTTTGGATCGGCATGACTGCATCGTAGG
CGTCTGTTTCAACCCGGACTCGCCCCAGGCGGTGGTCCTGTACGGCTTCG
GCTTCGTCTGCTACGTGGACCTGGGCCGACCTCCTGGCCAACTCGTCCAG
ATCCTACCGGCCAGCCACCCTGCCGCCCTGGCCCAGAGGGCGAGCACCCG
CAAGCGACAACACGAGTGGCTACCGACTAGGAAGCAGAAGAAGCAAAGAG
GGGAGGCCGAAATTGCGCAAGTGTCCTCAAACAAGGTGATCCAGGCTATT
GAAGACAACGACATGGGGGGCACGCACGGACGGCGCAGGAGTCGTGGTGA
TAGCCTTGtgcaggaggcagaggagcgctcgcttcctccaggcAGCGATG
TTTCCGAGCAGTTGAACGGGAAAATGGTGAAGGAAGATGATGGGAACGAT
TCGTGGAATTTCAAAATGCACTTGGGGTACCAAGGCGTTGTGGCAGTGGA
GGCCCTAGGCCCTGATGAGCTGTTGTTGGTTGAAGAACCATGGATCAAAA
TCGTTAGCAAACTTCCAGATGTACTACATCGACACCGATATGGTACTTAA
GTTGATATTTGGCAGACGCTTAGGAAAGTATGATCAGCAAAGTAGTATGT
AAAGTTACAGGTGTTTCCAGGGCAAGAGGACGCCCTCAAAAAGCTGTGAA
CCTTgcgtggcgggggggcagaaaTACACCCAGAAAGCATTTAAAAGTAT
CAAGTCATTCACCATGAAGT back to topCoding sequence (CDS) from alignment at KK037248.1:321017..324236+ >rna8302 ID=rna8302|Name=rna8302|organism=Nannochloropsis gaditana|type=CDS|length=2655bp|location=Sequence derived from alignment at KK037248.1:321017..324236+ (Nannochloropsis gaditana) ATGGTTTCGGCGCTCCATAATCCGCCTGAAACACCCGATAAAAAGGCGGA CGGTGCGATTGCAGCAGCCGTAGGGGCTGGAGGGTTGTCATTTCATCCCG CAGCAGGTCAGGAAGGCACGGCGGGTCGAGCTGCGATGACGCcgagaggc gaggaggaggatatcGAAGGAAGGCAGCTAATGGCGAAAAGGAGGGATCA GCATCTATTGTATATTCATAGGTGCCGCTTTCTCGACTGGGAGCCTCGCG CTATCGTATGCATGGCCGCGTGCGCATCAGGACGGATGCTTGCTGTGGCC CGGGAAAGCGGGGAAGTTGAAATTCGCCTGGTCGATGAAAAGTTTCGAGT GGCAGGTGTTGTGCCCGTACCTGGAGGAAACGGGCTCATTCGCAGCATGA CATGGTCGCGGCAGGTCTCTGAATCCCAGGGGCGCCTTTTCGTCGGGAGC TTGGATACGTCGGTATTCGAGATCGACGTGCCAGGCCTGCGGGTGCGGCG CCGGCAGGACTCCTACGGCGGCCCCGTCTGGTGCCTGGCGGCGGACCCTC ACCGTGACCTCCTGGCCGTTGGCTGTGAAGACGGCTCGGTCAAGCTGTTC AGTACCGCGGATCAGGGCTTCGAGTTCAGCCGGGCCTTGCCGACCGTGAA CTCTCGGATCCTCTCCATGGCCTGGCAagccccgccgtctcccagGGACT CCCCCAGCCTCTTTGTTGGCGCTGTGGACGGGACGATTCGCCACCTGGAT GCCCGGACAGGCCACAGCGCGTACCGGATGACGGTGGAGGCCAAGAACAG TGCGCACCCGCCCCTGGTCTGGTCCCTGCTGGCACTTTCCGACGGGACCC TCGTCAGCGGGGACTCGCTGGGCGCCGTCCATTTCTGGGACGGGGCTATG GGCGCGCTCAAGCAGTCGTTCTGGGTCCACGAGGCCGACGTgctggccct ggcggcgaGCGCGGCCGGCGACACTGTCTTCGCCTCGGGCGTGGACAGTA AGCTGGTCTGCCTCAGGCGTCCTTCCCAGGCCGGGGCCCGAGAGCCTCCA GGGGCGCCAGAGGACGAAGCCTGGGTCCTGGCCGCCTCTAACCGGGCCCA CAGCCACGACCTTCGCGCCCTGGCGGTGGTCgagaggtcgggggggaggg gaggcgaggggcgcCGGTCCTCTCTCCTGGTCTCGGGGGGGGTGGACACC AAGCTTTGCACGTACTCGGTCGCCAGTTTCGCGCACAACCGGCCCCGGTA CATTGCCCCCTACCCTTACTACCCCGTGGCGAGCGTGGCCTCTGCCCGTG GGCGCCGCCTTCTCATGATGCAGCACAGCCGAAAGCTCCAACTctggggc ctgggagggtttcaggaggagacggcacTGTGCCTACAACACGAGCCATC TCCCCTACTTGAAATCCAAGCGGTCAAGGGGCAGCTGATCGTGTCGtcgt cgctctcccccgACGGCCGCTTTCTGGCCTACGCGACGACGGGAACACTG CGGGTCCTTGccttggaggtgggggagagcgagggggggggggcggaggt agACAGAGGGGGTGACGGACACGCCCGGCCCCGTGTTCTCTTGCGTCGAA ATAAGCTACCTGCcttggcagggaggggcggggagaaagacgtCAAGGCC TTGTGCTTTTCCCCCGACTCGAGAAGCTTGGTGGTGGGcacaggtggagg acgggtgCTGAGGGCGGGCTTGAAGGGaagcctggtggaggaggctatCC GAGACACGTCATtagaaagcgaggaggaacagggggTGGTACGGCTGTCG TGCAGCCAGGACGGGCGGCTGCTAGCGGTGGGGCGGTGGAATGGGGACGT GGAGCTGTACGCAGTCCCTGCGAGCAGCAGcggggaggacacgggctccc tttctttgACCTGGCGACTCCCTCGACTGGACTCGGCCCCGACGGCGCTG GCCTTCCATCCTGAGACGGACATCCTGGTGGTCGCCTGCGTGTCAAACCG ATTCTACGTCTTCGACGCCGCCGGGCAAAGGCTCACGGACTGGTCTCAGG ACATgggccaccgccttccccgggAGCTTTTGGATCGGCATGACTGCATC GTAGGCGTCTGTTTCAACCCGGACTCGCCCCAGGCGGTGGTCCTGTACGG CTTCGGCTTCGTCTGCTACGTGGACCTGGGCCGACCTCCTGGCCAACTCG TCCAGATCCTACCGGCCAGCCACCCTGCCGCCCTGGCCCAGAGGGCGAGC ACCCGCAAGCGACAACACGAGTGGCTACCGACTAGGAAGCAGAAGAAGCA AAGAGGGGAGGCCGAAATTGCGCAAGTGTCCTCAAACAAGGTGATCCAGG CTATTGAAGACAACGACATGGGGGGCACGCACGGACGGCGCAGGAGTCGT GGTGATAGCCTTGtgcaggaggcagaggagcgctcgcttcctccaggcAG CGATGTTTCCGAGCAGTTGAACGGGAAAATGGTGAAGGAAGATGATGGGA ACGATTCGTGGAATTTCAAAATGCACTTGGGGTACCAAGGCGTTGTGGCA GTGGAGGCCCTAGGCCCTGATGAGCTGTTGTTGGTTGAAGAACCATGGAT CAAAATCGTTAGCAAACTTCCAGATGTACTACATCGACACCGATATGGTA CTTAA back to top
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