|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100067g14.2686.mrna |
| Orig protein id | gnl|cribi|Naga_100067g14.2686 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:307352..309650 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8297 ID=rna8297|Name=rna8297|organism=Nannochloropsis gaditana|type=mRNA|length=2599bp
CCAAAAAACAAATCAGGCTCCGAGGGGCGAGCAGTAAAGACCCAAAGAGC
GTGTGGGGCGCTATAGGAACGTACAGCCGTCCCGGCCAATGACCCCAGCC
TTACGGCGACCTCCTCCCACTCTCTCCGTCATCGTCCTTCTCCTTCATAT
GGGCCTCATCTCTATGGTGAAAGCCAGAGGGAGCTGGTCACGTTCATTGA
CTGCCCGAGTTGAAGTCAAGGAAGCTTTTCGGGATCAGAATGCCGCATTC
GTCGATTGCCACTCCAGAGTCAGACTTTCGAGGCCTACGCGACAGCCAGG
TGCATCGTCATATTACTTTACCTCCGTCACGTCCAAGTCCATGTACCCCT
CGACCGTTCCGCCTTGCAGCATATGTCTCAATACCGTCGTATCAACCTCT
CGAGCATCTGACATATGCTTTGATGGGAGACTGACAGCAGAGCAGCTCTT
CCCGACGTCCTTTGAGCTCGATATGCCGCCCATGGGCCACGTACTGGCCT
TGCGTCTGCCTGTATCCTCCGTATCACAAGACCCCGATCGCGAGTGGGAC
CTTTCCATTCTCCTAGATAGTTCGACGATGGACACGGTATCCCGATCTGC
AGCGAAGTTTCCGACCCTACTGCATCCAAAAGAGCTCGATCTTGCCATGA
ACATGAGCAACCTGGATTCGCGCCTTGCATTTCTGGGAGGGCGTCTGGCA
CTGCGGCGGAGTTTGCGCAAACTTCCACAGCCCATCAGGATAGAACAGGC
TGTGCTTCGGGACGAGAAAGGGGCGCCGGCATTGCCCTCCCACGTGCAAG
CGTCAATAAGCCACAAACAAGATCTGGCAATTTGTCTGCTGCGTTCGGTC
GAGGAGGACCCGAATCGTGCATTGTCCAACATTGGCGTGGACATAGAGAT
TTGCCAGCCTCGACCCAGCACAAATAGCATTGCAACACGTGTGCTCACTA
GAAGGGAGCAGGATGAGTTGGGCGGTCTGGCTTCACTGGGGATCAGTGGA
GAGAGCGAGCTCTTGCTTCGGTTTTCTCTGAAAGAGAGCGTCTACAAGGC
CATTTACCCGTTCCTGCGCCGGTACGTAGCTTTTCAAGAGGCGGAAGTGA
CCCCACACGTGGACGGCACGTCTACGATCGTCCTGTTCCTGAAGGGAGGG
GCCGCGGAGGGCTTGTTCGAGGCGGAGGGGCATTGGCGGCAAGTGGATAA
TGGCAGGTTCTTCTTGACAGCGGTGTGGGTCAGAAAAGTTGAAATAAGGT
CGTGAAGCTTGGCGTTGTAAGGACAGGAATGGTGCAGAGCGAAGATACGG
GATGGGAAGGGGAGGAGGAACGCAAGTTTGTGCTGGTAACCCAATTTTTT
TAAAATACGTCTGTCAACGTGACCGTTCAGATGGAGAATTACTCAGGTCC
AGGGTATTTTTGGGGGTTATTCTTCAATTTCTCCTACGCAATCTCCATCA
TTTCTGGAGAGTTCGTGGAAATACACGCGGATGTGATGACATATCCAGCG
CAAAGGCGCTGTCCCAAGCCGCACAGGAGGGCCGCAATACAAATCACCAC
ACAAATGCAACATTGAAATGCTTGCACTTGCAAAACAAACAGGAAATTCC
CCCGTTCTTCTCTCCTGCCCGCCTGGCCCCGAAAATGGATGTTCGGTACG
CGCGATAGGTTGCAGAGGAGCCTGTTTGCAGAGACAGTCGTCCTCCCGCC
ACGCCCCACCCAGTCACACAGATTTCTCTATCGAGAAGACCTGGGCGCCT
TTTCTCTCAACATACCCCGGAGCGGTCCCGACACACGTACCTACTTTAAT
TCGCACCGATCCTCTCGCCTTGCACCCCCGAAATCGACTTCATCCTCCCG
CGTTCAAACGCTACTTTTCTCCAGGATTTCTACTTCTTGCCCTTCTTGGA
GCCCTTGAGCGATTTCAAGAACTCAGGGTCCACGGCGTTGTCAGCTGGCA
AGGTCCTTGCAGAAGGGGCGTCCCCGGCCACAGAGGAGTAGGCGGGAGAG
GCGGCAGGAGCCGGTTTGGGATCGGCCGCTTTGGGCTTCGGAGTCTCCAC
AGGCTTGGGGGCCTCCGCCTTGGGTTCCGGGACAGGGGCAGGCGCAGGCG
TGGGGGCAGGAGCGGGCTTGGGCGCCTCGGCGACAGGGGCAGGCGCGGGC
GTGGGGGCAGGAGCAGGCTTGGGCGCCTCGGCGACAGGGGCAGGCGGTGC
TTCTGGAGCCGAAGGGGCAGGCTTGGAGACCTCTGGCGCTGGTGAGGGCG
GGGCAGGCTTCGGAACTTCCGCCTTGATAGGCTCAGGTGCCGGGGCCGGG
GGGGAAGGTTTGGGTGCCTCCACCTTGGGAGCCGGGGCAGCATCCTTTGG
GGGGACAGGGGGTGTCTTTTTCAGCTCCTTGACGATCGGGACCGGTTCCT
CAGGCTTGGGCAGGAGCACGAAGGCGCCCAGGGCGCCCGTCGAGGCCAAG
ATCAGACCGCCCGCTAAGGCCAGACGCACCGCGTCCGACGGGCCGGGTGC
CAAGGGTTTGCGGGCGCGCTGTTGTCGAAGGAACTCCGCTCGCGCTGCTT
CTTCGATGGCTTTCTTTTTCTCCGCAGCCGCGATCGCCCTCGCCTTACC back to topprotein sequence of rna8297 >rna8297-protein ID=rna8297-protein|Name=rna8297|organism=Nannochloropsis gaditana|type=polypeptide|length=425bp
MNSFKILLTLGILGVAVAFMGQVPPSPVRCSRSRGRIMASLADLQAKALS
KPADATKPAPTISTPVEQSGFSLFGKPTSPAPPALKNTVVAKPAVAKATT
SPAPAATKGTVAAKPAKTAAVKVTKDMAKVLTPAAVTTKVKSATAVEPAT
PPAVAPSGGDLGTAGVVGGALLATIAGAGAVTNALTGKARAIAAAEKKKA
IEEAARAEFLRQQRARKPLAPGPSDAVRLALAGGLILASTGALGAFVLLP
KPEEPVPIVKELKKTPPVPPKDAAPAPKVEAPKPSPPAPAPEPIKAEVPK
PAPPSPAPEVSKPAPSAPEAPPAPVAEAPKPAPAPTPAPAPVAEAPKPAP
APTPAPAPVPEPKAEAPKPVETPKPKAADPKPAPAASPAYSSVAGDAPSA
RTLPADNAVDPEFLKSLKGSKKGKK back to topmRNA from alignment at KK037248.1:307352..309650- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8297 ID=rna8297|Name=rna8297|organism=Nannochloropsis gaditana|type=mRNA|length=2299bp|location=Sequence derived from alignment at KK037248.1:307352..309650- (Nannochloropsis gaditana)
TTCACTCGTGACTATCTGTTCTCACTTAAACCCTTAAAGGACGATGAACT
CCTTCAAGATCCTGCTGACGCTTGGCATTTTGGGCGTGGCGGTGGCCTTC
ATGGGCCAGGTGCCCCCCAGCCCCGTGAGGTGCAGCAGAAGCCGAGGCCG
TATTATGGCTAGTCTGGCCGATCTGCAGGCGAAAGCTCTAAGCAAACCTG
CGGATGCCACAAAACCTGCTCCGACCATATCCACGCCCGTTGAGCAATCC
GGGTTTTCCTTGTTCGGCAAGCCTACGTCTCCCGCCCCTCCCGCTCTCAA
AAACACAGTGGTGGCCAAGCCTGCAGTCGCGAAGGCCACCACTTCTCCCG
CACCTGCCGCGACCAAGGGCACAGTAGCTGCTAAGCCAGCCAAAACCGCT
GCTGTCAAAGTGACGAAAGATATGGCCAAAGTTTTGACCCCTGCTGCTGT
CACCACAAAAGTCAAATCTGGTAAGTACATTCCGTCTCCTCTGAGGATGG
CGTTAATTCAAACAAAGCGTCTTAGCTTGACAGTGGTTGTTGAGGTGTCC
CCTTTGATGAATTGCGAAAACCTAGCGCAGGGGATTCGATGGAGGGCCTT
CGTTCACTTTGCAGGCTTCGTGTTATACTCTCGGGCTTGCCGTCGCCCCT
TTCACCTTTTCGGAGGAAGGGAGGAAGCGGATTCGCGTGCCCGAGCGTGA
GACTTGGGACCGGCAAAAAGGAGGAAGGCCTTCATGAAACTATCATTAAG
CATGCTATTTATTCTGTCTGATGGGGACTGACTTTCACCCGTGGCACCGC
ATCGTGCCCAACGCGTGTCTGAGCTACCCTTTCCCAGATCCGTTTCGTGA
AGACGCCTCATCTTACCCTCCAAACATCATGTCCACACCCACAGCCACTG
CTGTTGAACCCGCCACGCCTCCTGCGGTTGCCCCTTCAGGTGGCGATCTT
GGGACTGCCGGTGTCGTGGGGGGCGCCCTGCTGGCCACGATCGCGGGGGC
GGGCGCTGTGACCAACGCACTGACTGGTAAGGCGAGGGCGATCGCGGCTG
CGGAGAAAAAGAAAGCCATCGAAGAAGCAGCGCGAGCGGAGTTCCTTCGA
CAACAGCGCGCCCGCAAACCCTTGGCACCCGGCCCGTCGGACGCGGTGCG
TCTGGCCTTAGCGGGCGGTCTGATCTTGGCCTCGACGGGCGCCCTGGGCG
CCTTCGTGCTCCTGCCCAAGCCTGAGGAACCGGTCCCGATCGTCAAGGAG
CTGAAAAAGACACCCCCTGTCCCCCCAAAGGATGCTGCCCCGGCTCCCAA
GGTGGAGGCACCCAAACCTTCCCCCCCGGCCCCGGCACCTGAGCCTATCA
AGGCGGAAGTTCCGAAGCCTGCCCCGCCCTCACCAGCGCCAGAGGTCTCC
AAGCCTGCCCCTTCGGCTCCAGAAGCACCGCCTGCCCCTGTCGCCGAGGC
GCCCAAGCCTGCTCCTGCCCCCACGCCCGCGCCTGCCCCTGTCGCCGAGG
CGCCCAAGCCCGCTCCTGCCCCCACGCCTGCGCCTGCCCCTGTCCCGGAA
CCCAAGGCGGAGGCCCCCAAGCCTGTGGAGACTCCGAAGCCCAAAGCGGC
CGATCCCAAACCGGCTCCTGCCGCCTCTCCCGCCTACTCCTCTGTGGCCG
GGGACGCCCCTTCTGCAAGGACCTTGCCAGCTGACAACGCCGTGGACCCT
GAGTTCTTGAAATCGCTCAAGGGCTCCAAGAAGGGCAAGAAGTAGAAATC
CTGGAGAAAAGTAGCGTTTGAACGCGGGAGGATGAAGTCGATTTCGGGGG
TGCAAGGCGAGAGGATCGGTGCGAATTAAAGTAGGTACGTGTGTCGGGAC
CGCTCCGGGGTATGTTGAGAGAAAAGGCGCCCAGGTCTTCTCGATAGAGA
AATCTGTGTGACTGGGTGGGGCGTGGCGGGAGGACGACTGTCTCTGCAAA
CAGGCTCCTCTGCAACCTATCGCGCGTACCGAACATCCATTTTCGGGGCC
AGGCGGGCAGGAGAGAAGAACGGGGGAATTTCCTGTTTGTTTTGCAAGTG
CAAGCATTTCAATGTTGCATTTGTGTGGTGATTTGTATTGCGGCCCTCCT
GTGCGGCTTGGGACAGCGCCTTTGCGCTGGATATGTCATCACATCCGCGT
GTATTTCCACGAACTCTCCAGAAATGATGGAGATTGCGTAGGAGAAATTG
AAGAATAACCCCCAAAAATACCCTGGACCTGAGTAATTCTCCATCTGAAC
GGTCACGTTGACAGACGTATTTTAAAAAAATTGGGTTACCAGCACAAAC back to topCoding sequence (CDS) from alignment at KK037248.1:307352..309650- >rna8297 ID=rna8297|Name=rna8297|organism=Nannochloropsis gaditana|type=CDS|length=2556bp|location=Sequence derived from alignment at KK037248.1:307352..309650- (Nannochloropsis gaditana)
CCACTGCTGTTGAACCCGCCACGCCTCCTGCGGTTGCCCCTTCAGGTGGC
GATCTTGGGACTGCCGGTGTCGTGGGGGGCGCCCTGCTGGCCACGATCGC
GGGGGCGGGCGCTGTGACCAACGCACTGACTGGTAAGGCGAGGGCGATCG
CGGCTGCGGAGAAAAAGAAAGCCATCGAAGAAGCAGCGCGAGCGGAGTTC
CTTCGACAACAGCGCGCCCGCAAACCCTTGGCACCCGGCCCGTCGGACGC
GGTGCGTCTGGCCTTAGCGGGCGGTCTGATCTTGGCCTCGACGGGCGCCC
TGGGCGCCTTCGTGCTCCTGCCCAAGCCTGAGGAACCGGTCCCGATCGTC
AAGGAGCTGAAAAAGACACCCCCTGTCCCCCCAAAGGATGCTGCCCCGGC
TCCCAAGGTGGAGGCACCCAAACCTTCCCCCCCGGCCCCGGCACCTGAGC
CTATCAAGGCGGAAGTTCCGAAGCCTGCCCCGCCCTCACCAGCGCCAGAG
GTCTCCAAGCCTGCCCCTTCGGCTCCAGAAGCACCGCCTGCCCCTGTCGC
CGAGGCGCCCAAGCCTGCTCCTGCCCCCACGCCCGCGCCTGCCCCTGTCG
CCGAGGCGCCCAAGCCCGCTCCTGCCCCCACGCCTGCGCCTGCCCCTGTC
CCGGAACCCAAGGCGGAGGCCCCCAAGCCTGTGGAGACTCCGAAGCCCAA
AGCGGCCGATCCCAAACCGGCTCCTGCCGCCTCTCCCGCCTACTCCTCTG
TGGCCGGGGACGCCCCTTCTGCAAGGACCTTGCCAGCTGACAACGCCGTG
GACCCTGAGTTCTTGAAATCGCTCAAGGGCTCCAAGAAGGGCAAGAAGTA
GATGAACTCCTTCAAGATCCTGCTGACGCTTGGCATTTTGGGCGTGGCGG
TGGCCTTCATGGGCCAGGTGCCCCCCAGCCCCGTGAGGTGCAGCAGAAGC
CGAGGCCGTATTATGGCTAGTCTGGCCGATCTGCAGGCGAAAGCTCTAAG
CAAACCTGCGGATGCCACAAAACCTGCTCCGACCATATCCACGCCCGTTG
AGCAATCCGGGTTTTCCTTGTTCGGCAAGCCTACGTCTCCCGCCCCTCCC
GCTCTCAAAAACACAGTGGTGGCCAAGCCTGCAGTCGCGAAGGCCACCAC
TTCTCCCGCACCTGCCGCGACCAAGGGCACAGTAGCTGCTAAGCCAGCCA
AAACCGCTGCTGTCAAAGTGACGAAAGATATGGCCAAAGTTTTGACCCCT
GCTGCTGTCACCACAAAAGTCAAATCTGCCACTGCTGTTGAACCCGCCAC
GCCTCCTGCGGTTGCCCCTTCAGGTGGCGATCTTGGGACTGCCGGTGTCG
TGGGGGGCGCCCTGCTGGCCACGATCGCGGGGGCGGGCGCTGTGACCAAC
GCACTGACTGGTAAGGCGAGGGCGATCGCGGCTGCGGAGAAAAAGAAAGC
CATCGAAGAAGCAGCGCGAGCGGAGTTCCTTCGACAACAGCGCGCCCGCA
AACCCTTGGCACCCGGCCCGTCGGACGCGGTGCGTCTGGCCTTAGCGGGC
GGTCTGATCTTGGCCTCGACGGGCGCCCTGGGCGCCTTCGTGCTCCTGCC
CAAGCCTGAGGAACCGGTCCCGATCGTCAAGGAGCTGAAAAAGACACCCC
CTGTCCCCCCAAAGGATGCTGCCCCGGCTCCCAAGGTGGAGGCACCCAAA
CCTTCCCCCCCGGCCCCGGCACCTGAGCCTATCAAGGCGGAAGTTCCGAA
GCCTGCCCCGCCCTCACCAGCGCCAGAGGTCTCCAAGCCTGCCCCTTCGG
CTCCAGAAGCACCGCCTGCCCCTGTCGCCGAGGCGCCCAAGCCTGCTCCT
GCCCCCACGCCCGCGCCTGCCCCTGTCGCCGAGGCGCCCAAGCCCGCTCC
TGCCCCCACGCCTGCGCCTGCCCCTGTCCCGGAACCCAAGGCGGAGGCCC
CCAAGCCTGTGGAGACTCCGAAGCCCAAAGCGGCCGATCCCAAACCGGCT
CCTGCCGCCTCTCCCGCCTACTCCTCTGTGGCCGGGGACGCCCCTTCTGC
AAGGACCTTGCCAGCTGACAACGCCGTGGACCCTGAGTTCTTGAAATCGC
TCAAGGGCTCCAAGAAGGGCAAGAAGTAGATGAACTCCTTCAAGATCCTG
CTGACGCTTGGCATTTTGGGCGTGGCGGTGGCCTTCATGGGCCAGGTGCC
CCCCAGCCCCGTGAGGTGCAGCAGAAGCCGAGGCCGTATTATGGCTAGTC
TGGCCGATCTGCAGGCGAAAGCTCTAAGCAAACCTGCGGATGCCACAAAA
CCTGCTCCGACCATATCCACGCCCGTTGAGCAATCCGGGTTTTCCTTGTT
CGGCAAGCCTACGTCTCCCGCCCCTCCCGCTCTCAAAAACACAGTGGTGG
CCAAGCCTGCAGTCGCGAAGGCCACCACTTCTCCCGCACCTGCCGCGACC
AAGGGCACAGTAGCTGCTAAGCCAGCCAAAACCGCTGCTGTCAAAGTGAC
GAAAGATATGGCCAAAGTTTTGACCCCTGCTGCTGTCACCACAAAAGTCA
AATCTG back to top
|