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Properties
| Property Name | Value |
|---|
| Product | Tubby C-terminal-like domain protein |
| Orig transcript id | gnl|cribi|Naga_100067g12.2692.mrna |
| Orig protein id | gnl|cribi|Naga_100067g12.2692 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:303586..305533 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8295 ID=rna8295|Name=rna8295|organism=Nannochloropsis gaditana|type=mRNA|length=2109bp
GGTGCTAAGAGATACCTTTTATATGCAGGTCGCAGGAGGCATTCCACCAC
CTCGCTGTTTGTTGGCGCAAGACATGGACCAGCATGGTCGTCACCCACAG
GGAATACAAAGGTGTTTACGAAGCTGAACATGCGATACACCTTCTCGCTC
TTTTCTGGAAAAGGTTGTGACATTTTGCCTGTGCAGTGGCCGGTCGAGCG
GGAATGAAGTGCTTGGGCGAGGTAAAGCCTTCCCTCTCGCGGACACCAAC
TGCCGCGGAATAAGAAACCCGTCACATGAAAAGACTTCAGGAGTATCTTC
TCTTTTTTCTTCTTCGCGGGAAACCGTTTTCTCCAACGAAGCATACTGGT
GCCCAAGAATTGAAATATCCACTAAGTGCTTTTGTAAAACCTCAAGGCGA
TGAGCGTCTGGAAGTCAGACGGTCGTTTTCTCTTGTTCCCGCTGCACGTT
ATGTCTCCTCCCCGAGACAGAATATCACCAAGAAAGGAGGAAAGAGAAGA
AGCGACATTTCTTGTCAGCACGGCCGCAGAATCTTCCATGCCACTCAATT
GAAATTGTTTGTTGTATAGGAGCGACTAAAGCATAGTAGGGAGGCGAATC
ATATGGGCTTGCAATGTTATCAGCTTGTTTCGTCGGAAGTCTACCAGGAC
ATCTACTAGTATAGATCATCACCGAGACGACACGGGTTGGAGGTCTCCTT
TGGGAACCCTGCAGTCTGGCATGAAGGGATACTCACCGCTATGAGGAGGC
AGCATGACGCTTCATTTTTAAGACCTCTTCTAGGCCTTTTGCATGCACAC
TGTGAAAAAGTATACTAGGAATTTTCCCACGTATGACTCATCGAATTCTT
CCTCACTCTTCGTTGGGTGACCCTCTGCACAGCGTTGTACAAGCATCCAT
CAACCTCGAAATCATGCCCAATCCGGTTGTCTTCTTCGACGTCCAGACTG
GCTCTGGCAATAACCTTGGTCGCATTGAGATGACGCTGCGTGCTGATGTC
GTGCCCAAGACGGCTGAGAATTTCAGGGCTCTGTGCACGGGCGAGAAGGG
AGCGGGTCGCTCCGGTAAGCCGCTTCACTTTAAGGGCTCCACCTTCCACC
GCGTGATTCCGGACTTCATGTGCCAAGGTGGTGACTTCACTGCCGGCAAC
GGTACTGGCGGCGAGTCTATCTACGGGAACAAATTCCCCGACGAAAACTT
CACGCTCAAGCACACGGGCCCAGGCATTCTCTCCATGGCCAACGCCGGCC
CCAACACGAACGGCTCCCAGTTCTTCCTTTGCACGGCCGAGACTGCCTGG
TTGGACGGCAAGCACGTGGTGTTTGGGAGTGTGACGAAGGGCATGGATGT
GGTCAAGGCCGTCGAATCCTACGGCTCTCGCACGGGGGCCACGCGCGAGA
AGATAGTCATTGCCGACTGCGGGCAGCTCTCCTAAAACAGGGTTCCAAGA
GAAAAGGGAAGCCCTTCCCCCTTCATGTCATTGTCGGTAGATGAGTGGCG
AGATTTAGTGAAGTAGAGAGCAAGAGGGAAGTGCGCCAGGAGAGGACGAA
TGATCGATGTGTCCTGAGCGTGGAGCTTTCTCGGGCTGGACAAGGCGGAG
GGGCCGACGTTCGCAGTGCTCCTGACGTAATTTGGGAGGTGCGAGGACAC
CGACCAGCTTAATGTGACTGAAGAGGGCGAACGAGAAGCTGTCTGGGAAA
ACATGGGACTCGAGAAGAAAGATTGATTAGGGAGATCGCATCGTGAAATG
TGGTTTTAGAAAGTCGTGCGTTTGATCGGTTTGGACGGTGCGGAGTGACG
GAGCAGCGAACGTAAACGGGGATAGCATTCACTAGTCCTCTGCGGGACAG
TGTAGTCAGAAATCAGTGCAATGGATGGAGAAACCTGCGGCGTTTCAAAT
CAACTTTTTTTCTTATTTTGGATGTGCTTTCTGTTGAACTCGGATGCCAC
AGTCTCTACCCTAACTAGGAACCCATCTGTCGGGGAGCGCGCATGTCTGG
GATCACCCCCACGACCACCACCACCACCCCGCCCTTTCAATATTCCTCCA
AAGCCGCCACTGCCACAGCCAGGGCCTGAAAGGGTGAGAACGGCGCGCGA
AAATCCAGG back to topprotein sequence of rna8295 >rna8295-protein ID=rna8295-protein|Name=rna8295|organism=Nannochloropsis gaditana|type=polypeptide|length=607bp
MTQSFRALLNLLERVDSEEEAVAALEEFLILAQDRPFTCQERDKAFCASS
HLVQRGILSEAHPLMKFLDYRLQPAYLPGVSELRLPSANSLESSISLRHS
PHLSSHKFVRNGNSCNTKKSYQAEPTHASDDFPPPLVTNPPKQGYVPHDF
LFRRVPPETKMLCTIRRLPSNSKAVSPTYRLFLERVLVSNDAVRMVRQED
LAKDAITMHPRAVMSEECEGARFPGAPSLEADRPHCLCTVRAQKAGDGSN
SAGKAPCSPLPRVTTETRSFCVLAVLAPPAAASTLPLASDPRGDTGEEEG
ALPLGWLHRPCRGVWTAVSTSSADANILTPHLAVHISEARSRLLFLSVVL
RTDGQDTPNPFRQHHVFQVPLAHLQSPCASSLANENSMPTGWNAWGMRHI
KSKVGSNPSALPSRAPNVDPPTPASSSSETPISLPSSSSSSPLAGPPVAP
SSPRVLTLHSQLPAWDPARGLHALDFEMGEQRVPLPSRKNLVVVEATASS
LQDYAAGLTEVRASGHRAEGGSGARRRGRTAVRTRVGLSHLGGGLGLRRG
ERSGVDDAAASEWGTLERPRFACQLGKLSEDAYSLDFRAPFSPFQALAVA
VAALEEY back to topmRNA from alignment at KK037248.1:303586..305533- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8295 ID=rna8295|Name=rna8295|organism=Nannochloropsis gaditana|type=mRNA|length=1948bp|location=Sequence derived from alignment at KK037248.1:303586..305533- (Nannochloropsis gaditana)
ATGACTCAGAGTTTCAGGGCATTGTTAAACTTACTAGAACGGGTGGACTC
TGAGGAGGAGGCGGTGGCGGCATTAGAAGAATTCTTGATTCTGGCACAGG
ACAGGCCCTTCACATGCCAAGAACGCGATAAAGCCTTTTGCGCGAGCTCC
CATCTAGTGCAACGCGGTATTCTCTCCGAGGCCCACCCGCTTATGAAATT
TTTAGATTACCGTCTTCAGCCTGCTTATCTTCCCGGAGTCTCCGAGCTCC
GATTGCCATCGGCTAATTCGCTTGAATCATCAATATCTCTTCGACACTCT
CCACACCTGAGCAGCCACAAATTTGTCAGAAACGGCAACAGCTGCAACAC
CAAGAAGTCCTACCAAGCTGAGCCCACCCATGCCTCGGACGATTTCCCAC
CCCCATTGGTCACCAATCCACCGAAGCAGGGCTACGTTCCGCACGACTTT
CTCTTCCGACGAGTCCCCCCGGAGACCAAGATGCTGTGCACAATCAGACG
GCTGCCGTCGAATAGCAAGGTATGTCACGTACGGGCGATTTCAATGTTTA
GAGAAACATGACTGTTATGATATTATGTTCCTTTTTGCGGATTGAGGTAT
GTCATAACGGGAGACTCATGGGCCCCACCCTGCACGAGCACAGGCCGTAA
GCCCCACGTACCGCCTGTTCCTCGAGAGGGTGCTGGTCTCCAACGATGCC
GTGCGAATGGTCCGTCAGGAAGACCTTGCAAAAGATGCGATCACGATGCA
TCCGCGCGCCGTGATGTCGGAGGAATGTGAAGGTGCCAGGTTCCCCGGCG
CCCCGTCCTTGGAGGCCGACCGCCCCCACTGTCTGTGCACTGTCCGGGCT
CAAAAGGCCGGCGACGGAAGCAACAGCGCTGGGAAAGCACCTTGCTCCCC
GTTGCCGCGCGTGACGACCGAGACCAGAAGCTTCTGCGTCCTGGCCGTCT
TGGCCCCCCCTGCCGCCGCCTCCACGCTCCCCCTAGCCTCCGATCCCAGG
GGGGACACGGGCGAGGAGGAGGGGGCCCTTCCGCTCGGTTGGCTGCACAG
GCCTTGTCGAGGCGTTTGGACCGCCGTTTCGACCTCATCGGCGGACGCGA
ATATCCTCACACCCCACCTTGCCGTCCACATCTCCGAAGCCCGCTCCCGG
CTACTCTTTCTCTCGGTGGTGCTGCGCACCGACGGCCAAGACACGCCGAA
CCCATTTCGGCAGCATCACGTTTTCCAAGTGCCGTTGGCTCACCTACAAT
CTCCATGTGCCTCTTCCCTTGCGAACGAGAATTCGATGCCTACGGGCTGG
AATGCCTGGGGAATGCGCCACATCAAAAGCAAAGTCGGGTCCAACCCTTC
TGCCTTGCCCTCCCGCGCTCCCAACGTCGATCCACCCACGCCTGCCTCCT
CATCGTCAGAGACTCCCATCAGCCTCCCCTCCTCCTCATCTTCCTCCCCC
CTGGCCGGTCCCCCGGTCGCCCCTTCTTCCCCTCGTGTCCTCACGCTGCA
CAGCCAACTGCCCGCATGGGATCCGGCCAGGGGCCTCCATGCGCTCGACT
TCGAGATGGGCGAGCAACGGGTGCCGCTTCCTTCGCGGAAGAACCTGGTG
GTGGTGGAGGCGACTGCATCTTCGCTTCAAGACTATGCTGCGGGACTGAC
GGAGGTCAGGGCCTCCGGGCACAGGGCGGAAGGCGGGAGCGGCGCCAGGA
GGCGAGGAAGGACCGCTGTCAGGACGCGGGTTGGCTTGAGTCATCTGGGC
GGGGGGCTAGGGCTTCGAAGAGGAGAGAGGAGCGGCGTGGACGATGCCGC
GGCCTCGGAGTGGGGCACCCTGGAGCGACCGCGCTTCGCCTGCCAGTTGG
GCAAGCTGAGCGAGGATGCCTACAGCCTGGATTTTCGCGCGCCGTTCTCA
CCCTTTCAGGCCCTGGCTGTGGCAGTGGCGGCTTTGGAGGAATATTGA back to topCoding sequence (CDS) from alignment at KK037248.1:303586..305533- >rna8295 ID=rna8295|Name=rna8295|organism=Nannochloropsis gaditana|type=CDS|length=3648bp|location=Sequence derived from alignment at KK037248.1:303586..305533- (Nannochloropsis gaditana)
GCCGTAAGCCCCACGTACCGCCTGTTCCTCGAGAGGGTGCTGGTCTCCAA
CGATGCCGTGCGAATGGTCCGTCAGGAAGACCTTGCAAAAGATGCGATCA
CGATGCATCCGCGCGCCGTGATGTCGGAGGAATGTGAAGGTGCCAGGTTC
CCCGGCGCCCCGTCCTTGGAGGCCGACCGCCCCCACTGTCTGTGCACTGT
CCGGGCTCAAAAGGCCGGCGACGGAAGCAACAGCGCTGGGAAAGCACCTT
GCTCCCCGTTGCCGCGCGTGACGACCGAGACCAGAAGCTTCTGCGTCCTG
GCCGTCTTGGCCCCCCCTGCCGCCGCCTCCACGCTCCCCCTAGCCTCCGA
TCCCAGGGGGGACACGGGCGAGGAGGAGGGGGCCCTTCCGCTCGGTTGGC
TGCACAGGCCTTGTCGAGGCGTTTGGACCGCCGTTTCGACCTCATCGGCG
GACGCGAATATCCTCACACCCCACCTTGCCGTCCACATCTCCGAAGCCCG
CTCCCGGCTACTCTTTCTCTCGGTGGTGCTGCGCACCGACGGCCAAGACA
CGCCGAACCCATTTCGGCAGCATCACGTTTTCCAAGTGCCGTTGGCTCAC
CTACAATCTCCATGTGCCTCTTCCCTTGCGAACGAGAATTCGATGCCTAC
GGGCTGGAATGCCTGGGGAATGCGCCACATCAAAAGCAAAGTCGGGTCCA
ACCCTTCTGCCTTGCCCTCCCGCGCTCCCAACGTCGATCCACCCACGCCT
GCCTCCTCATCGTCAGAGACTCCCATCAGCCTCCCCTCCTCCTCATCTTC
CTCCCCCCTGGCCGGTCCCCCGGTCGCCCCTTCTTCCCCTCGTGTCCTCA
CGCTGCACAGCCAACTGCCCGCATGGGATCCGGCCAGGGGCCTCCATGCG
CTCGACTTCGAGATGGGCGAGCAACGGGTGCCGCTTCCTTCGCGGAAGAA
CCTGGTGGTGGTGGAGGCGACTGCATCTTCGCTTCAAGACTATGCTGCGG
GACTGACGGAGGTCAGGGCCTCCGGGCACAGGGCGGAAGGCGGGAGCGGC
GCCAGGAGGCGAGGAAGGACCGCTGTCAGGACGCGGGTTGGCTTGAGTCA
TCTGGGCGGGGGGCTAGGGCTTCGAAGAGGAGAGAGGAGCGGCGTGGACG
ATGCCGCGGCCTCGGAGTGGGGCACCCTGGAGCGACCGCGCTTCGCCTGC
CAGTTGGGCAAGCTGAGCGAGGATGCCTACAGCCTGGATTTTCGCGCGCC
GTTCTCACCCTTTCAGGCCCTGGCTGTGGCAGTGGCGGCTTTGGAGGAAT
ATTGAATGACTCAGAGTTTCAGGGCATTGTTAAACTTACTAGAACGGGTG
GACTCTGAGGAGGAGGCGGTGGCGGCATTAGAAGAATTCTTGATTCTGGC
ACAGGACAGGCCCTTCACATGCCAAGAACGCGATAAAGCCTTTTGCGCGA
GCTCCCATCTAGTGCAACGCGGTATTCTCTCCGAGGCCCACCCGCTTATG
AAATTTTTAGATTACCGTCTTCAGCCTGCTTATCTTCCCGGAGTCTCCGA
GCTCCGATTGCCATCGGCTAATTCGCTTGAATCATCAATATCTCTTCGAC
ACTCTCCACACCTGAGCAGCCACAAATTTGTCAGAAACGGCAACAGCTGC
AACACCAAGAAGTCCTACCAAGCTGAGCCCACCCATGCCTCGGACGATTT
CCCACCCCCATTGGTCACCAATCCACCGAAGCAGGGCTACGTTCCGCACG
ACTTTCTCTTCCGACGAGTCCCCCCGGAGACCAAGATGCTGTGCACAATC
AGACGGCTGCCGTCGAATAGCAAGGCCGTAAGCCCCACGTACCGCCTGTT
CCTCGAGAGGGTGCTGGTCTCCAACGATGCCGTGCGAATGGTCCGTCAGG
AAGACCTTGCAAAAGATGCGATCACGATGCATCCGCGCGCCGTGATGTCG
GAGGAATGTGAAGGTGCCAGGTTCCCCGGCGCCCCGTCCTTGGAGGCCGA
CCGCCCCCACTGTCTGTGCACTGTCCGGGCTCAAAAGGCCGGCGACGGAA
GCAACAGCGCTGGGAAAGCACCTTGCTCCCCGTTGCCGCGCGTGACGACC
GAGACCAGAAGCTTCTGCGTCCTGGCCGTCTTGGCCCCCCCTGCCGCCGC
CTCCACGCTCCCCCTAGCCTCCGATCCCAGGGGGGACACGGGCGAGGAGG
AGGGGGCCCTTCCGCTCGGTTGGCTGCACAGGCCTTGTCGAGGCGTTTGG
ACCGCCGTTTCGACCTCATCGGCGGACGCGAATATCCTCACACCCCACCT
TGCCGTCCACATCTCCGAAGCCCGCTCCCGGCTACTCTTTCTCTCGGTGG
TGCTGCGCACCGACGGCCAAGACACGCCGAACCCATTTCGGCAGCATCAC
GTTTTCCAAGTGCCGTTGGCTCACCTACAATCTCCATGTGCCTCTTCCCT
TGCGAACGAGAATTCGATGCCTACGGGCTGGAATGCCTGGGGAATGCGCC
ACATCAAAAGCAAAGTCGGGTCCAACCCTTCTGCCTTGCCCTCCCGCGCT
CCCAACGTCGATCCACCCACGCCTGCCTCCTCATCGTCAGAGACTCCCAT
CAGCCTCCCCTCCTCCTCATCTTCCTCCCCCCTGGCCGGTCCCCCGGTCG
CCCCTTCTTCCCCTCGTGTCCTCACGCTGCACAGCCAACTGCCCGCATGG
GATCCGGCCAGGGGCCTCCATGCGCTCGACTTCGAGATGGGCGAGCAACG
GGTGCCGCTTCCTTCGCGGAAGAACCTGGTGGTGGTGGAGGCGACTGCAT
CTTCGCTTCAAGACTATGCTGCGGGACTGACGGAGGTCAGGGCCTCCGGG
CACAGGGCGGAAGGCGGGAGCGGCGCCAGGAGGCGAGGAAGGACCGCTGT
CAGGACGCGGGTTGGCTTGAGTCATCTGGGCGGGGGGCTAGGGCTTCGAA
GAGGAGAGAGGAGCGGCGTGGACGATGCCGCGGCCTCGGAGTGGGGCACC
CTGGAGCGACCGCGCTTCGCCTGCCAGTTGGGCAAGCTGAGCGAGGATGC
CTACAGCCTGGATTTTCGCGCGCCGTTCTCACCCTTTCAGGCCCTGGCTG
TGGCAGTGGCGGCTTTGGAGGAATATTGAATGACTCAGAGTTTCAGGGCA
TTGTTAAACTTACTAGAACGGGTGGACTCTGAGGAGGAGGCGGTGGCGGC
ATTAGAAGAATTCTTGATTCTGGCACAGGACAGGCCCTTCACATGCCAAG
AACGCGATAAAGCCTTTTGCGCGAGCTCCCATCTAGTGCAACGCGGTATT
CTCTCCGAGGCCCACCCGCTTATGAAATTTTTAGATTACCGTCTTCAGCC
TGCTTATCTTCCCGGAGTCTCCGAGCTCCGATTGCCATCGGCTAATTCGC
TTGAATCATCAATATCTCTTCGACACTCTCCACACCTGAGCAGCCACAAA
TTTGTCAGAAACGGCAACAGCTGCAACACCAAGAAGTCCTACCAAGCTGA
GCCCACCCATGCCTCGGACGATTTCCCACCCCCATTGGTCACCAATCCAC
CGAAGCAGGGCTACGTTCCGCACGACTTTCTCTTCCGACGAGTCCCCCCG
GAGACCAAGATGCTGTGCACAATCAGACGGCTGCCGTCGAATAGCAAG back to top
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