rna8279, rna8279 (mRNA) Nannochloropsis gaditana

Overview
Namerna8279
Unique Namerna8279
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1909
Alignment locationKK037248.1:264833..266050 +

Link to JBrowse

Properties
Property NameValue
Productn-acetyltransferase 5
Orig transcript idgnl|cribi|Naga_100011g91.3493.mrna
Orig protein idgnl|cribi|Naga_100011g91.3493
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:264833..266050 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100011g91gene8019Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8279rna8279-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22493.1cds8255Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8279 ID=rna8279|Name=rna8279|organism=Nannochloropsis gaditana|type=mRNA|length=1909bp
TTTTTTTTTAACATGTTGCAACAGCAGCCCAAACCCAGTACAGGAGCACG
CCGAGAAATGTGTTGGTCTTCTTCCACTTCTCTTTTCCTCTCTCCTCACC
GAGAAAATTATCCCTGATCACACCCTACCAGTACAGAATAAGTATAAACG
TACAGTCACAAGGCGTGCGTGCACCCGCACGAACTACCAATAAGGGTCTC
ACGTCCTGAAGCGCCGGCACGGGATGTCTGGTATGGAGAGCAGCGACGGC
GAGGAGTACACTTACCAGGACGAAAGCGGGGAGGAGGTTGTGGGGGGCGT
GGAGAGTCAGGAGGAGGAGGAGGAGTACAGCTATTCAGACGGGGAGGGGG
GGGGTGCTCCTGTGCCCCTCCCGCCGCCCTCATCCTCCATGGCGGACGGA
TGCAAGGTGATCGACGCGGACGAGCTGCGAGCCACCATGTCGGCCCTCAT
TGACGATATCTCCAGCGTCCTCGCCATCCACCCCTGCGCGGCTGCCGCCC
TTCTCCGCCACTACAATTGGAACAAAGAATCGGTCATCGACTCTTTCTGC
ACGGACCCAGACCAGGCCAAGGAGAAGGCGGGGATCATGCGCTTTGTCCC
GGACCTGCAGACCTCGGACAAGGGCCGGCTCTGCGGGATATGCCGGGAGG
ACGTGCCCGCCGAGGCCCTGGTCGCTCTCGGCTGCGGCCACTTCTTCTGC
CGGGGCTGTTTCACGCAGTACCTGGTCAGCAAGGTGGAGGAGGGGATGGG
CTGCCCGCTCACCCGCTGTCCGGAGTATCGGTGTCCTGAAATGGTGACGG
AGAATTTCTTTCGCGTCCTAGTGCCTCCCGCCACCCTGGCGGCCTATTTG
CGCTACAGCCTCAAGTCCTTTGTCGACATCTGCAGCGCCTTCCGCTGGTG
CCCAGGACGGGGCTGCGACTTCGTGGCCATGGGCAACAGCTCCCTCCGGG
CCTGTCTGTGCAAGTGTGGGATGCTCTTCTGCTTCCGCTGCGGCGAGGAG
GCCCACGTGCCTGCGTCCTGCGAGGACATGGTCACTTGGGTGGAGAAGTG
TAAGAACGAGTCGGAGACGGCCAACTGGATCCTGGCAAATACCCGGAAGT
GCCCAAAATGCGCCACGCGCATTGAGAAGAACCAAGGCTGCAACCACATG
ACTTGTCGCCAGTGCAAGTTCGAGTTCTGCTGGATCTGCATGGGCCCCTG
GACCGAGCATGGCGCCAACACTGGGGGGTACTACAAGTGCAACAAGTACG
ACCCGTCGACGCCTACAAAGGACGAGCAGGACGGGGCCAAGGCGAAGGCA
GAGCTGGACCGCTACCTGCACTACTACCAGCGGTACGACAATCACCACAA
GGCGCAGGAGTACGCGACCAAGCAAGAGGAGGAGATTGAACGTCGGATGA
TGCGTCTCCAGGAAACGGACGGCTCACGCTGGATCGACGTCCAGTTCTTG
AAGGTGGCGAACGAGAAGCTGGTGGAGTGCCGGCGAGTGTTGAAGTACAC
CTATGTCTTCGGGTACTACCTGCCGGAGGGGACGGCTCGGAAGCGGCTCT
TTGAGCACCACCAGGAGAACCTGGAGAAGTTCACGGAGCACCTGTCATGG
CTGAGCGAACAGAGCTTGGAGGAGTTCAAAAAGGAGGAGAAGCGGAGCGA
GGTGGTGAACTACACCCGTGTGACGGAGACCTTCCTGAAGAACCTGCTCA
AGAGCGTGGAGGACGGGCTCATGGACGAGGACGGTGAGGACATGGAGGAG
GGTGGGTGGGAGGGAAAAGCGGAGCCTGGGCGGCGGGCAGGGGCCGCCGG
GGGGGGGCAAGTGGGGGAAGCAGCAGAGGAGGGGCGTCCGACCCTGCCAT
CAAGAGACGGCGCGGGTGGGGGGGGTCGGGCCCGTCGGAGCGGAGTGGCG
AGGGCATGA
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protein sequence of rna8279

>rna8279-protein ID=rna8279-protein|Name=rna8279|organism=Nannochloropsis gaditana|type=polypeptide|length=176bp
MGTLRRFTCDDLLRFNNVNLDVLTETYNLGFYLQYLSTWPEYFLVEEAPH
AGGKRLTSYIMGKAEGKGENWHGHVTAVTVAPEYRRLGRARLMMDLLEEV
STEGYNAYFVDLFVRVSNTLAIRMYENFGYSVYRQVLGYYSGEEDAYDMR
KALPRDRDKRSVIPLTHPVTPADLEW
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mRNA from alignment at KK037248.1:264833..266050+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8279 ID=rna8279|Name=rna8279|organism=Nannochloropsis gaditana|type=mRNA|length=1218bp|location=Sequence derived from alignment at KK037248.1:264833..266050+ (Nannochloropsis gaditana)
cgcaatatccccccccctccttgagaGCTGCCGTCCGCATTGAAATGGGT
TTCACGACGCTCAGACGGTCATCATCGCAACTTTGTAGGACGGCTGCAAG
CACGACTGCCCAATCTACGCGTTAAGGTCACTTGAAAGCATGGTAAGTGC
CAAGGCGAAGGTTCTGGTAATTCTCCCCCGACTTGCTGAGACtacttttt
ttaaaattttaCCTTTTCAAGACCGTAAATCTGTCGCAAACTTTCGAGCT
TGGCAGTGTTAGGGTCCCTTTCAAGTACTCGTCGGGAGTCATTCCGTCTT
TTACTCATCGTATTTTTCGGTATTCATCGAAACAAACATGCACATCgcaa
cctcctcctacctcccgGCCTTGTCAGGGTACCTTGCGCCGCTTTACATG
CGACGACCTTCTCCGATTTAATAACGTCAACCTCGACGTGCTCACGGAGA
CATACAACTTGGGGTTCTATCTCCAGTACCTTTCGACGTGGCCCGAGTAT
TTCCTTGTCGAGGAAGCTCCACACGCCGGCGGGAAGCGTCTGACGTCGTA
CATAAtgggcaaggcggagggaaaaggagagaatTGGCACGGACATGTGA
CAGCGGTGACTGTCGCCCCTGAATACAGGCGCCTGGGAAGAGCTCGGCTC
ATGATGgacctgctggaggaggtatCCACAGAGGGCTACAACGCCTACTT
CGTGGATCTCTTCGTACGGGTCTCCAACACTTTAGCGATACGCATGTACG
AGAATTTCGGGTACTCTGTCTACCGGCAGGTCTTGGGCTACTATtctgga
gaagaggatgctTATGGTAGGCAGGGGAGTGGCGGGAAGGACTGTGGGGT
AAGAAGGAGACAACTCTTACGTGAGCTTGATGCACATCTATCATCTGACT
CCTCCCACAGACATGCGCaaagccctccctcgagaCAGGGACAAGCGTTC
AGTCATACCATTAACGCATCCGGTCACGCCTGCCGATCTGGAGTGGTAAA
TGACGCGGCATtggcggcggagacggatGGTAACTGAGTGAAGCAACAAG
GGACTgaacgggaaggaaagcgtcaGGTTCGGACGACGGGCACCTGTTAC
TTTCGCTTTTTGTCAAGGCCGACGTTTCAAACACACTTAGAAGATAAACG
CCTAGCTTTCAGCGCAGTGCCCCAAGACCTGTacaccctttcccccgccc
ggaCTATCCACACaaccc
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Coding sequence (CDS) from alignment at KK037248.1:264833..266050+

>rna8279 ID=rna8279|Name=rna8279|organism=Nannochloropsis gaditana|type=CDS|length=1593bp|location=Sequence derived from alignment at KK037248.1:264833..266050+ (Nannochloropsis gaditana)
ATGGGTACCTTGCGCCGCTTTACATGCGACGACCTTCTCCGATTTAATAA
CGTCAACCTCGACGTGCTCACGGAGACATACAACTTGGGGTTCTATCTCC
AGTACCTTTCGACGTGGCCCGAGTATTTCCTTGTCGAGGAAGCTCCACAC
GCCGGCGGGAAGCGTCTGACGTCGTACATAAtgggcaaggcggagggaaa
aggagagaatTGGCACGGACATGTGACAGCGGTGACTGTCGCCCCTGAAT
ACAGGCGCCTGGGAAGAGCTCGGCTCATGATGgacctgctggaggaggta
tCCACAGAGGGCTACAACGCCTACTTCGTGGATCTCTTCGTACGGGTCTC
CAACACTTTAGCGATACGCATGTACGAGAATTTCGGGTACTCTGTCTACC
GGCAGGTCTTGGGCTACTATtctggagaagaggatgctTATGACATGCGC
aaagccctccctcgagaCAGGGACAAGCGTTCAGTCATACCATTAACGCA
TCCGGTCACGCCTGCCGATCTGGAGTGGTAAATGGGTACCTTGCGCCGCT
TTACATGCGACGACCTTCTCCGATTTAATAACGTCAACCTCGACGTGCTC
ACGGAGACATACAACTTGGGGTTCTATCTCCAGTACCTTTCGACGTGGCC
CGAGTATTTCCTTGTCGAGGAAGCTCCACACGCCGGCGGGAAGCGTCTGA
CGTCGTACATAAtgggcaaggcggagggaaaaggagagaatTGGCACGGA
CATGTGACAGCGGTGACTGTCGCCCCTGAATACAGGCGCCTGGGAAGAGC
TCGGCTCATGATGgacctgctggaggaggtatCCACAGAGGGCTACAACG
CCTACTTCGTGGATCTCTTCGTACGGGTCTCCAACACTTTAGCGATACGC
ATGTACGAGAATTTCGGGTACTCTGTCTACCGGCAGGTCTTGGGCTACTA
TtctggagaagaggatgctTATGACATGCGCaaagccctccctcgagaCA
GGGACAAGCGTTCAGTCATACCATTAACGCATCCGGTCACGCCTGCCGAT
CTGGAGTGGTAAATGGGTACCTTGCGCCGCTTTACATGCGACGACCTTCT
CCGATTTAATAACGTCAACCTCGACGTGCTCACGGAGACATACAACTTGG
GGTTCTATCTCCAGTACCTTTCGACGTGGCCCGAGTATTTCCTTGTCGAG
GAAGCTCCACACGCCGGCGGGAAGCGTCTGACGTCGTACATAAtgggcaa
ggcggagggaaaaggagagaatTGGCACGGACATGTGACAGCGGTGACTG
TCGCCCCTGAATACAGGCGCCTGGGAAGAGCTCGGCTCATGATGgacctg
ctggaggaggtatCCACAGAGGGCTACAACGCCTACTTCGTGGATCTCTT
CGTACGGGTCTCCAACACTTTAGCGATACGCATGTACGAGAATTTCGGGT
ACTCTGTCTACCGGCAGGTCTTGGGCTACTATtctggagaagaggatgct
TATGACATGCGCaaagccctccctcgagaCAGGGACAAGCGTTCAGTCAT
ACCATTAACGCATCCGGTCACGCCTGCCGATCTGGAGTGGTAA
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Synonyms
Publications