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Properties
| Property Name | Value |
|---|
| Product | denn domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100011g82.3471.mrna |
| Orig protein id | gnl|cribi|Naga_100011g82.3471 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:236440..239505 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8270 ID=rna8270|Name=rna8270|organism=Nannochloropsis gaditana|type=mRNA|length=2974bp
GGGTATTTTTCTCGCTCACTGTTGCGCAGTCTTGGCTGATCGTGCTTTCT
CGTACCCCGCGCATGAACCCATTTCCTCTCCGTCATTTCTCTCGACCCGT
AGAGGCGCCCGAAAGCAAGCTCGATGAATGGCGCGACGCGGTCGTGAATC
TGTTGCGTTTGGGTAGCCGGGCACAGGGATACTATAATGGAAGAGGACCA
AGATTCCCCTCCTCCGCTTCCCTTGTCCGCACCACCTTCGCTACCGGCCC
GGCTCATCGATGGAGGCGCTTCCGCGGTGCAAGAGCGTAATAACATTGCA
CGAAAAGCATCGGTACTTCCTCAGGGCTTCACACGGTATGGGACTGGCTG
TAGCAGTGCTACCAAAGACCTTGTCGACCAACAGTCAAGGGGGTACAGGG
TCCGGGCGCACGAGGCTCCCCCGCTCCTGTATCAGGCTACTCTGGGCCTG
GCTAGGGTTTACGAGCACGTACGGGAGAGCAGGGAGAAGCGGCGACCCAG
ATCCTTCAGCACTTCTGAGACGCACTTGTTCACGTCGGATGACGGGACCT
TGCGGTTGGGACCGCATTTGCCTTTAATGCTGGCCCGGTACCGCTTTATT
CGTGCAATAGGGCGAGGGACATTCGCACAGATCATTTGCGCCGAGGACAC
CTTCCATCCACGGAGGAGACAGGTGGCGATCAAAATCTTGAACCTGAACT
ATGCGGAAATCGGTAAGCGCGAGGCCTTGTGCTTGCGAATGATCCATGAC
ATGCCCGAGGGCCCGCACGCGGCCTTGGTAGGCTTCCACTCCGCCTTCGA
CTTCATGGGCCACTTCTGTATTGTCATGGAGCTCTGTGTGGGCGGATCTT
TCCAGGACTACATCCATCCACTGTCCACAGGCTGTCCACCCCGACCGGAG
CTCTCTCGACAGCCCCTGCAGGCGTCCCCGCACTCGGTGGGCAGAGACGG
CAGGCGGGACGGAGGGCGAGGGGCAGGCCCCGGTTTGACAGTGCCGCTTG
TGCGGGAGGCCGCCCTGCACCTGGTCAAAGCGCTCCTGCTCCTACACAAT
CAGGACGTGATCCACGCGGACCTGAAGCCCGAGAATGTGCTTCTCGCAGG
GCCCATGGGCGGGGCCCTCGGGCAGGGGAGAGGCCAGCACTTCCCTTGGG
GGGTTTGGGGTCAGCACGTGCGTCTGACCGATCTCGGGAACGCCATCAAG
AGTCGTGAGGTCGAGCTGTACCGGGATGATTACGAGATTCAGACCCTGAG
CTACCGGGCGCCCGAGGTCCTGGTGGGGGGGTGCGGGGGGCGAGCCTTCG
ACCACAAGATCGACATGTGGTCCCTGGGGGTTCTCCTCGTCGAGCTCTAC
CTGGGCCGGCCGCTCTTCCGCGCCTCCTCCCAAGCGCTGATGGTCAAGCG
GATCCTCTCCGTCCTCGGGCCTCTCCCTGCGCGCGCGTTCGTGACGGGCA
AGTTCTACACGGCCTACTTTGGGCCCGACCACCGGCTGCGGCGGGAGATC
CTCTCCCTCCCCGACGACCCGGTCCAGGCCACCACGGCCCTCACGGACCC
CGCGGGGACGCCCAACGCCTTCCGGTACGACCGGGACCGACATCGCCGTC
TCGTCTGCGAGCTCCTGCGCTCCCAGGACTCGAACCTGATCGGCTTTGTC
TGTGGCCTTCTCGACCTCGACCCGCGCTCACGCCTCTCAGCTTTTCAGGC
GCTTATGCACCCTTTTTTGGCCGAGAGCTTCCCCTTTACCCTCCTTAAGC
CATTCTTGTCGCAGGAGGCTGCGAGGATGGTGGCAGCGGCCGCGCGGCCC
TTGGTTGCCTCCCCTCCCGGCGCCCACGCCGACCTGGACTCTCCCGCCAT
TTTCCAGCTCGGCCCCGCTCAACTACCGATCGCATCAGCGCACGATGCGC
ATAAACCTGTGCGAGGGAAAGAGGAGGTCGGGGGCTCGACGAAGGAGGAA
GGATTGGTGGAACTCGTGGAGCCAACAGCCATGACCTTCCGAACGAAACA
CTTGAAGGCAGAAAATGGTGAGGGGCGCGGAGATGGCTTGTCTCCCTCGG
AGCTGCCGGTCCATGCATCAGAGGAAGGACGGGGGGATGCGGCGCTCCTG
TCGTCTCCGCAGCTTTCACCCGACGCAACCCCCACTCTCTCCCTAGAGGA
CCCCGCGGGCACTTCCCCCCTTCCCCTGGCCGCGGATGTGGTCTTGCTGG
ACGAGGAGGAGGCAGACGAGGAGGGGAGTCGGAAGGAAAATAAAACGTTA
AGGGAGGGAGGGGATGCAAGTTTCGAGATGGAGGACGAGCATCCGGTCTC
TCCAAGTGGCAGTCCTCTGCTTCTTCTTGATGCCGATGCCCCGCACCACG
CATCCCCTGTCTGCAAGAAACGATTGCGTTCAGTCGAGCGGATCGAGACG
GGCAGTGGCCTTGGTGGAGGTGGAAAAGAGGTTCGGAAGGAGCCTGAAAG
TAGGGGCGACACGAATCTGCGTTGCCCTGCCACCCCCCTGCAGGCCCGGA
AGACAGGGCAGGCGGGCCTCAGGAAGTGGTACGACGAGGTCGGTGCCGAC
GAGAAGGAGGAGGACCAGGAGGACGAGGATGAGGGCTCCGAGGACGGAAG
AGGCCACACGTCCCAGGCCCTTCCTTGTCCGCCGGCCTCCCGTCCGGTGC
AGACGAAGGAGGTGGACGACGGTGTGGACTCGGCTGAGGAGGGTGAGTTG
TTCTTGTGACCTTGTCTGCCTCTGTGTAGAAGGGCATTACATGTTTCTTG
TGTAAATGTACATGTATTGTGTAGAAGACGCATTTGTTAAACGTCAGAAT
TTGGGCGGGAACAACACAGTAAAAGGCCCCGTATGGTGCGGCGGCTGAGA
GCGCGGTCGGGCGGGATGTCAGACGCCAAAGTACACAATAACCGGAAAAT
GTAAATTCACTTCCACAATAAAATTTTCGAAAATGAGACACTTGAGATCA
TACAGGTAGAGATAAAATATTTGC back to topprotein sequence of rna8270 >rna8270-protein ID=rna8270-protein|Name=rna8270|organism=Nannochloropsis gaditana|type=polypeptide|length=1021bp
MTISMSPAQEPRTVPLVSRRVTPTSRHLPSSPPSPPSAAKLAATRPINTL
ALSDGRRDDVKCPYKCRAPPLLIGLGDSGRVHEHRTEEKPPSLPERETVE
RLQRKVSRLETENLLLRQQMKLHLPNASWSKTPSPFALQGTSAMSASNTL
ATKACERYQESVSSPSSTSSSASPKYPLGVSRFSWPPGRSMKECVQEGER
SDDPGFPTGGDDTRVQFGTPRRTAKIMMGAASRGATRTSMSPAAVLSSTP
FSEFAIVGIQESILKGEVSPAPCMQPVEAMEVVMGESPEEEAKPRELSRI
SEFCFPQGGRLDLAPATQINVWTGTHRDQTHVLQFTDEQGATSYGVCLTI
YEARVDCPPSLIKALQAVRRKHAAARTLQYFVRRRVGLSSRSSKTLRRSK
SSRSRSGSYSYSDTNSAIVRSKTSVVACQAAGSDLAGVIDEGKGARRGLL
DHVRTGMRKLQQGGGWGTPRGDRQRTRSRAMRLEGQDWERSQLGREVSGD
VDEYRRLVRATEALWGSAVVSTCRYGVSPTYKLYCQQEREEIDFVVVAPR
CFCLISHQPNHPLLCKLLSIIVERERTQPQRENVLSALKRRRSCNALSLA
CSPSGSLCSSPTVAGTLMEKHAGEVASGGGVGAMGGAIYYAPDGGHCSGD
DDLVSSRRRFLRYIQHDVVFPSTGILTLSFPPYAPSTTRLDLPLVPLQDW
TVAVLFSHVSVDVIIKCVNLLLLEQSLVVIGEDQGLVSAISTAFVSLLQP
FKWDGVFIPLLPTALSDILQSPVPFVLGVQPPFDPTRSTPHAAALHIGRC
KEHLRLPDLTVKLPLCYQLLQALKQASKLFSCRRSRWANLHLATYMAGLT
GDERQALASLRGIFHEYVQGLCGDLAYPGAWRKYGTFDSTSETFEFFPSW
FLEPMRMMLEYQSAFVHTQMFSSYVDKRRIEDMQKSRQSQRCGAFLATFL
AFRYRIRRLRRMSSFAVQVREDVGNFGGNEWMAEARESVAKESEASTDGV
RYPFRGYVARPSPLRIEEEEH back to topmRNA from alignment at KK037248.1:236440..239505- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8270 ID=rna8270|Name=rna8270|organism=Nannochloropsis gaditana|type=mRNA|length=3066bp|location=Sequence derived from alignment at KK037248.1:236440..239505- (Nannochloropsis gaditana)
ATGACAATCTCAATGTCGCCAGCACAGGAACCCCGGACGGTGCCGTTGGT
GTCCCGCCGAGTCACGCCAACATCTCGTCATTTACCTTCGAGCCCCCCGT
CTCCTCCATCCGCTGCCAAACTCGCAGCAACCAGGCCAATAAATACCCTC
GCCCTTTCTGATGGACGAAGGGATGATGTCAAATGCCCCTATAAATGTCG
TGCTCCCCCTCTGTTGATAGGCCTGGGAGATTCTGGACGTGTCCATGAGC
ACAGGACAGAAGAAAAACCACCTTCCCTCCCAGAGCGAGAGACGGTTGAG
AGGCTGCAGCGAAAAGTTTCCCGACTGGAGACCGAAAACTTGTTGCTGCG
GCAGCAAATGAAATTGCATCTACCAAACGCATCCTGGTCGAAAACTCCAT
CACCCTTTGCGCTGCAGGGCACTTCTGCGATGTCGGCCTCTAACACTCTC
GCAACAAAGGCGTGCGAGCGCTATCAAGAGAGCGTGTCATCACCCTCCTC
GACTTCCTCTTCAGCGTCGCCAAAGTACCCTCTCGGTGTGTCTCGATTTT
CCTGGCCACCTGGAAGGAGTATGAAGGAATGCGTGCAGGAGGGCGAGCGT
TCAGATGATCCGGGCTTCCCAACTGGCGGCGATGATACCCGGGTTCAGTT
TGGGACTCCTCGACGCACGGCCAAGATCATGATGGGCGCAGCAAGCCGAG
GTGCAACACGAACTTCCATGTCGCCGGCGGCAGTGCTGTCCTCGACCCCA
TTCAGTGAGTTTGCCATCGTCGGTATCCAGGAGAGCATCCTAAAGGGGGA
GGTGTCCCCCGCCCCTTGTATGCAGCCTGTAGAGGCGATGGAGGTCGTGA
TGGGTGAAAGCCCAGAGGAAGAAGCCAAGCCTAGGGAGCTGAGCCGGATC
AGTGAATTTTGCTTCCCTCAGGGCGGGCGCCTAGATCTCGCGCCTGCGAC
GCAGATAAATGTGTGGACCGGGACGCATCGCGACCAGACCCATGTTCTCC
AGTTCACGGACGAGCAAGGCGCCACGTCTTATGGCGTTTGCTTGACCATC
TACGAGGCGCGTGTCGACTGTCCTCCGTCGCTGATTAAGGCCTTGCAGGC
GGTGCGGAGGAAGCACGCGGCAGCGCGGACGCTGCAGTACTTTGTCAGGC
GGCGCGTTGGTCTCTCATCGAGGAGTAGCAAGACGCTCCGCCGTAGCAAG
AGCAGCCGAAGCAGGAGCGGCAGCTACAGCTACAGCGACACAAACAGTGC
TATCGTCAGATCCAAGACTAGCGTCGTTGCTTGCCAGGCTGCAGGCAGCG
ACCTTGCGGGCGTCATTGACGAAGGTAAAGGTGCCCGCCGAGGGCTCCTG
GACCATGTCAGGACCGGCATGCGCAAGCTACAGCAAGGCGGTGGATGGGG
CACGCCCAGGGGGGATCGCCAGCGGACTAGAAGTCGAGCAATGAGGCTGG
AGGGACAGGATTGGGAGCGGTCGCAGCTGGGTAGGGAAGTGTCGGGGGAT
GTGGATGAGTACCGCCGACTCGTTCGCGCCACCGAAGCTTTGTGGGGGAG
TGCTGTGGTGTCCACCTGCCGCTACGGGGTTTCGCCTACTTACAAGCTAT
ATTGCCAGCAGGAGCGAGAGGAGATAGATTTTGTGGTGGTGGCGCCGCGG
TGCTTCTGCCTGATCAGCCACCAACCCAATCATCCCCTCCTGTGCAAACT
CTTGTCTATCATTGTCGAACGGGAGCGCACACAGCCGCAGAGGGAAAACG
TGCTGTCCGCGTTGAAGCGACGACGCAGCTGCAATGCGCTGTCACTTGCA
TGCTCGCCCTCTGGCAGCCTATGTTCATCCCCCACTGTTGCGGGCACCTT
GATGGAGAAGCACGCAGGCGAGGTCGCAAGCGGAGGGGGCGTGGGAGCCA
TGGGCGGAGCAATCTATTACGCTCCCGATGGGGGACACTGCAGTGGCGAC
GACGATCTAGTTTCTTCGCGGCGACGGTTTTTGCGGTATATCCAGCATGA
TGTGGTCTTCCCATCCACAGGGATCCTCACGCTCTCTTTTCCCCCGTACG
CCCCCTCGACAACCCGCCTGGACCTCCCTCTTGTGCCACTGCAAGACTGG
ACTGTAGCAGTGCTTTTCTCGCACGTCTCGGTGGATGTGATCATCAAGTG
CGTCAATCTTCTCCTCCTTGAGCAGAGCCTGGTTGTTATAGGCGAGGACC
AAGGACTGGTAAGCGCGATTAGTACGGCTTTCGTCAGCCTCCTCCAGCCT
TTCAAATGGGACGGGGTCTTCATTCCTCTGCTTCCAACAGCCTTGAGCGA
CATTCTCCAGTCTCCGGTGCCCTTTGTGCTGGGCGTTCAACCTCCTTTCG
ACCCCACTCGTAGCACTCCTCACGCCGCCGCCTTGCACATCGGCCGCTGT
AAGGAGCACCTTCGTCTTCCCGATCTGACCGTCAAGTTGCCCCTCTGCTA
TCAGCTGTTGCAAGCTCTCAAACAAGCGTCAAAGCTTTTCTCTTGTCGTC
GGTCCAGGTGGGCGAATCTTCATTTAGCCACTTATATGGCTGGACTCACA
GGAGACGAGAGACAGGCGTTGGCGTCCCTCCGAGGTATCTTTCATGAATA
CGTGCAAGGGCTTTGTGGAGACCTTGCCTATCCAGGGGCATGGAGGAAAT
ACGGAACTTTTGATAGCACCAGCGAAACATTCGAGTTCTTTCCGAGCTGG
TTCTTGGAGCCGATGCGGATGATGTTGGAGTATCAGAGTGCCTTCGTTCA
CACGCAGATGTTCTCCTCCTATGTCGACAAAAGAAGAATCGAGGACATGC
AAAAGTCTAGACAGAGCCAGCGATGTGGGGCCTTTTTGGCGACCTTTTTG
GCCTTTCGATACCGGATCAGGCGACTGCGGCGAATGTCTAGTTTTGCCGT
TCAAGTTCGCGAAGACGTGGGCAACTTCGGAGGCAACGAGTGGATGGCTG
AAGCGAGAGAAAGTGTGGCGAAGGAAAGTGAAGCGTCTACGGATGGGGTG
CGATATCCCTTTCGGGGCTATGTTGCGAGGCCATCGCCTTTGCGCATTGA
GGAAGAGGAACATTAG back to topCoding sequence (CDS) from alignment at KK037248.1:236440..239505- >rna8270 ID=rna8270|Name=rna8270|organism=Nannochloropsis gaditana|type=CDS|length=3066bp|location=Sequence derived from alignment at KK037248.1:236440..239505- (Nannochloropsis gaditana)
ATGACAATCTCAATGTCGCCAGCACAGGAACCCCGGACGGTGCCGTTGGT
GTCCCGCCGAGTCACGCCAACATCTCGTCATTTACCTTCGAGCCCCCCGT
CTCCTCCATCCGCTGCCAAACTCGCAGCAACCAGGCCAATAAATACCCTC
GCCCTTTCTGATGGACGAAGGGATGATGTCAAATGCCCCTATAAATGTCG
TGCTCCCCCTCTGTTGATAGGCCTGGGAGATTCTGGACGTGTCCATGAGC
ACAGGACAGAAGAAAAACCACCTTCCCTCCCAGAGCGAGAGACGGTTGAG
AGGCTGCAGCGAAAAGTTTCCCGACTGGAGACCGAAAACTTGTTGCTGCG
GCAGCAAATGAAATTGCATCTACCAAACGCATCCTGGTCGAAAACTCCAT
CACCCTTTGCGCTGCAGGGCACTTCTGCGATGTCGGCCTCTAACACTCTC
GCAACAAAGGCGTGCGAGCGCTATCAAGAGAGCGTGTCATCACCCTCCTC
GACTTCCTCTTCAGCGTCGCCAAAGTACCCTCTCGGTGTGTCTCGATTTT
CCTGGCCACCTGGAAGGAGTATGAAGGAATGCGTGCAGGAGGGCGAGCGT
TCAGATGATCCGGGCTTCCCAACTGGCGGCGATGATACCCGGGTTCAGTT
TGGGACTCCTCGACGCACGGCCAAGATCATGATGGGCGCAGCAAGCCGAG
GTGCAACACGAACTTCCATGTCGCCGGCGGCAGTGCTGTCCTCGACCCCA
TTCAGTGAGTTTGCCATCGTCGGTATCCAGGAGAGCATCCTAAAGGGGGA
GGTGTCCCCCGCCCCTTGTATGCAGCCTGTAGAGGCGATGGAGGTCGTGA
TGGGTGAAAGCCCAGAGGAAGAAGCCAAGCCTAGGGAGCTGAGCCGGATC
AGTGAATTTTGCTTCCCTCAGGGCGGGCGCCTAGATCTCGCGCCTGCGAC
GCAGATAAATGTGTGGACCGGGACGCATCGCGACCAGACCCATGTTCTCC
AGTTCACGGACGAGCAAGGCGCCACGTCTTATGGCGTTTGCTTGACCATC
TACGAGGCGCGTGTCGACTGTCCTCCGTCGCTGATTAAGGCCTTGCAGGC
GGTGCGGAGGAAGCACGCGGCAGCGCGGACGCTGCAGTACTTTGTCAGGC
GGCGCGTTGGTCTCTCATCGAGGAGTAGCAAGACGCTCCGCCGTAGCAAG
AGCAGCCGAAGCAGGAGCGGCAGCTACAGCTACAGCGACACAAACAGTGC
TATCGTCAGATCCAAGACTAGCGTCGTTGCTTGCCAGGCTGCAGGCAGCG
ACCTTGCGGGCGTCATTGACGAAGGTAAAGGTGCCCGCCGAGGGCTCCTG
GACCATGTCAGGACCGGCATGCGCAAGCTACAGCAAGGCGGTGGATGGGG
CACGCCCAGGGGGGATCGCCAGCGGACTAGAAGTCGAGCAATGAGGCTGG
AGGGACAGGATTGGGAGCGGTCGCAGCTGGGTAGGGAAGTGTCGGGGGAT
GTGGATGAGTACCGCCGACTCGTTCGCGCCACCGAAGCTTTGTGGGGGAG
TGCTGTGGTGTCCACCTGCCGCTACGGGGTTTCGCCTACTTACAAGCTAT
ATTGCCAGCAGGAGCGAGAGGAGATAGATTTTGTGGTGGTGGCGCCGCGG
TGCTTCTGCCTGATCAGCCACCAACCCAATCATCCCCTCCTGTGCAAACT
CTTGTCTATCATTGTCGAACGGGAGCGCACACAGCCGCAGAGGGAAAACG
TGCTGTCCGCGTTGAAGCGACGACGCAGCTGCAATGCGCTGTCACTTGCA
TGCTCGCCCTCTGGCAGCCTATGTTCATCCCCCACTGTTGCGGGCACCTT
GATGGAGAAGCACGCAGGCGAGGTCGCAAGCGGAGGGGGCGTGGGAGCCA
TGGGCGGAGCAATCTATTACGCTCCCGATGGGGGACACTGCAGTGGCGAC
GACGATCTAGTTTCTTCGCGGCGACGGTTTTTGCGGTATATCCAGCATGA
TGTGGTCTTCCCATCCACAGGGATCCTCACGCTCTCTTTTCCCCCGTACG
CCCCCTCGACAACCCGCCTGGACCTCCCTCTTGTGCCACTGCAAGACTGG
ACTGTAGCAGTGCTTTTCTCGCACGTCTCGGTGGATGTGATCATCAAGTG
CGTCAATCTTCTCCTCCTTGAGCAGAGCCTGGTTGTTATAGGCGAGGACC
AAGGACTGGTAAGCGCGATTAGTACGGCTTTCGTCAGCCTCCTCCAGCCT
TTCAAATGGGACGGGGTCTTCATTCCTCTGCTTCCAACAGCCTTGAGCGA
CATTCTCCAGTCTCCGGTGCCCTTTGTGCTGGGCGTTCAACCTCCTTTCG
ACCCCACTCGTAGCACTCCTCACGCCGCCGCCTTGCACATCGGCCGCTGT
AAGGAGCACCTTCGTCTTCCCGATCTGACCGTCAAGTTGCCCCTCTGCTA
TCAGCTGTTGCAAGCTCTCAAACAAGCGTCAAAGCTTTTCTCTTGTCGTC
GGTCCAGGTGGGCGAATCTTCATTTAGCCACTTATATGGCTGGACTCACA
GGAGACGAGAGACAGGCGTTGGCGTCCCTCCGAGGTATCTTTCATGAATA
CGTGCAAGGGCTTTGTGGAGACCTTGCCTATCCAGGGGCATGGAGGAAAT
ACGGAACTTTTGATAGCACCAGCGAAACATTCGAGTTCTTTCCGAGCTGG
TTCTTGGAGCCGATGCGGATGATGTTGGAGTATCAGAGTGCCTTCGTTCA
CACGCAGATGTTCTCCTCCTATGTCGACAAAAGAAGAATCGAGGACATGC
AAAAGTCTAGACAGAGCCAGCGATGTGGGGCCTTTTTGGCGACCTTTTTG
GCCTTTCGATACCGGATCAGGCGACTGCGGCGAATGTCTAGTTTTGCCGT
TCAAGTTCGCGAAGACGTGGGCAACTTCGGAGGCAACGAGTGGATGGCTG
AAGCGAGAGAAAGTGTGGCGAAGGAAAGTGAAGCGTCTACGGATGGGGTG
CGATATCCCTTTCGGGGCTATGTTGCGAGGCCATCGCCTTTGCGCATTGA
GGAAGAGGAACATTAG back to top
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