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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100011g55.3495.mrna |
| Orig protein id | gnl|cribi|Naga_100011g55.3495 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:166194..168349 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8245 ID=rna8245|Name=rna8245|organism=Nannochloropsis gaditana|type=mRNA|length=3225bp
CGGACGCTCCAGCCTCCCCCCATCCTGAGCTCGTGCGTGCATACGCAGAA
TATCTAAGTCGTGCTTCTTTTGGGATGGTTGTGCGAGAATTACGGCCGCA
GTTCGAAGCAGTTCGTTTGAGAGAGAAGCATGGATCCACTTCACGTATCG
TCAACGTCTTCCGTTTTTCTTTTGTAACGATTACAAAGCACATCTTGCAT
CCATCCGTTTGTCAAGATACCATGAAGCAACAGATTCATACCAGCCACTA
ATTAGACCTTTCTTTGGCACTTTTAGCAACAAACAACCACCAACCCCCAC
TTCGACCAAGCAACTATGTCGGCAGATAATGTCAAGACTTCTACCATTGG
CTATCCTCGCATCGGTCCGAAACGAGAGATGAAGAAAGCCCTTGAGGAGT
ACTGGGCAGGAAAGTCGAGCAAAGAGGCTCTGACAGCTGTGGCAAAACAA
GTCGAAGAAGCTGCTTGGAAGACGCAAGCGGACTCTGGCATCAATCTGGT
GGCCCTTGACGGGACTTGCTACGATCAGATGCTGGATCACTGCACCTACC
TGGGCCTTCTACCCGCGCGTTTCCAGGAACTCTCAGGCCTCGACGCGTAC
TTCGCAGCCGCTCGCGGACATCCTCCCAACATCACCGCGTTGGATATGTC
CAAGTTGATGGACTCCAATTATCATTATCTGGTCCCCGAGCTGACAGCAA
ATTCCACCCCCAAGCCGAACTGGGCGCCTTTCTTGGAGGCCGTCCGCCGT
GGCCAGGCGACCGTGGGGGCGGAGAAAGCCGTTCCCATGCTGATTGGACC
CATTACCTTCACCGTTTTGTCTCGTGGCGACTTCGATCGGAGTGTCATGA
TCCAGCGCCTGGGACCAGCCTATCAAACGGTCCTGAATGAGTTAGCGAAG
CTCGGGGTCCCTGAGGTCCAGATTCATGAGCCTGTGCTCGCATTAAGCGC
AGCTAATCAGTACCAGGCCGACGCTGAAACGGTTTATCAGTCTCTGGCTG
GCACTGTTCCTCTTCACCTTGTTGTACCGTACGACGACGTAGCCGCTGAC
GTGTACCCGTGGCTCGTGAAGCTGCCCGTGCAGGCCATCGGCTTGGATTT
CTGTGGGGTGCCCGGGGCCCCGCACGGGAACTCCACGTGCCAGCTAATCG
CCAAGTACGGATTTCCTTCGGATAAGCGTCTGGGTGTGGGGATTATTGAC
GGTCGTAGCCCGTGGGCGGACAACGGCACCGCCGTCAAAGTCGTGGCGGC
CCTGCGGAAGCATTTGGGTCCTGGGCAGGCGCTCTCGGTCCAGACCTCTG
CATCCTTGCAACACGTCCCTTTGGATTTGAACTTGGAGACCGAACTGCCC
ACTGCGGTGAAAAGCCGTCTGGCATTTGCCCAACAGAAGCTGGAGGAAAT
GGTAGCAGTCAAGGAGGCCGTCACGGGACACGCCGGGGCAGCCAGCGATA
TCGATTTGAGCACTTATACCGGGGCTCCCACAATGGGTCTTACGGCGAAA
GCAATTCCCACCGAATTTTTCCAGCGTCCGGCACCTTTCGCAGTACGCCG
GCCTCAGCAGCCGCAATTTCATGCCTTCCCAACCACCACCATAGGGTCGT
TTCCTCAGACGCCAACGATTCGCCGGGCGCGATTGCAGTACAAGAAAGGA
ACCATTTCCGAAGTGGAGTATCGCGAGCGTATCGCTGCTGAGATCGGCTA
CTCCATCGGTGCTCAAGAAGCCCTGGGGCTGGACGTCCTGGTACACGGCG
AGGCGGAGCGCACGGACATGGTCGAGTACTTCGGAATGAAGCTCAACGGC
TTCTGTTTCACTCAGCACGCATGGGTGCAGTCGTACGGTTCACGCTACGT
GCGCCCGCCCCTGATTGTGGGCGACGTGTCCCGCCAGGGTCCGATGACGG
TGCACGAATTTGAACTGGCCCAGTCGATGACGAGCCGCGCCTTCGTAAAG
GGCATGCTCACGGGCCCGACAACCATCATCAACTGGTCGTTCCCCCGCAA
AGACATCACGCGCTCTGAGCAGGCGTTCCAGATCGGCCTGGCCCTGCGCG
AAGAGGTGGCGGACCTAGAGAAGGCGGGCTGCCGCATTATCCAGGTGGAC
GACCCCGCCATCCGCGAAGGCCTGCCTCTGAAGACCGACCGGCAGGCCCT
CTATCTGGAGTGGTCCGCGGCTGCCTTCCGCCTCAGCTGTGGCGTGGCGA
CCCCGGCCTGCCAGATCGTCACGCACCTCTGCTACTCCAACTTCGAAGAA
ATCATGGCCGCAATCGACGCGTTAGACGCGGATGTGCTGACCATCGAGAA
CTCTCGCTCGGACGACGAGATGGTCCGGGCCCTCTCCGCCTACGGCTACA
GCCGTGACTTGGGGCCAGGCGTCTACGACGTGCACTCCCCCCTTGTTCCT
AGCGTGGAATCCATGGCAGCTAAGGCGCGCGCATACGTGGCGGCGGGCAT
CGACATCTCCAAAGTCTGGCTTAACCCGGACTGTGGACTCAAGACTCGTC
GCTGGGAGGAAGTTCTCCCCTCTCTGCGTAACATGGTGGCCGCAGCAAAG
CTGGTTCGCGAAGAGATGGGGGGAGGCAAGGCCAACGCCCGAGGTGTCAC
CGCCGCCAAGTAAAACGCTGGGCCTCGTCGTCTGCTTTACCCCACTCTTG
TCCGCTCTGTGCGTTTTGGAGAGAAAGGGGAGTAGGCATATGTAGGTGGA
ATAAGGGCGGCAAGAGGACCAAAAGAGGAGAACGATTGTTGCGGGGACAA
TCAAATATGCAGATTTGATGTCTGGATCTTTTGCTCGCCTGTTAAGTCAA
AAAATTATCTAGTACAAGAAGTAGGGGGGCTACTCGTGATGAAGCCGTCC
TTTGGTCTCAGCACGCCCGCAAGGAAGACTTTGGACGAGAAATAGAGGCA
TGATATTGGAGCGGGTGTCTCATGTCTTAGACGTGGGATATGTTACTAGG
ATACGTCGCAGGGGAAAACGGGTAACGGGTAGGAGTTTTTAAAAAATGGC
GCTGTGGCTACGATGGCAGTCGAGAAGAGAGCGTTTTCAGCTCACTTTTT
GCATCTAACAGTCGTGCTGTGTGGTAAGCTGGGACTTGTAGCGATAAGTC
GTTTAGGCGCGAAGCTCATAGAGGCAGCAAGTCCGAGGCTACGCATTAGG
CCAGTTTTCTGTTTCGAGAACCACGTACCCTAACCCTTACAGAGAGGAAT
AATATTCCTGAATCGCTATTTCATT back to topprotein sequence of rna8245 >rna8245-protein ID=rna8245-protein|Name=rna8245|organism=Nannochloropsis gaditana|type=polypeptide|length=564bp
MHRPLEVETRTNYHHRPLERIGGGADVVTGEGLCALARQHASKLIILIVV
ALVIATLSTQHSMNGSDEGNFAGALDPGNGGSDAESIEAMSECLENIDFE
DFGSFFGGVSRRDCAAFCTAMPNCRVWQHVATSGGSCNTRYSNHTGFVSM
HAGVESCVQLSHKPPDMTKFLGVAHWQGCYFKSAKPFLLDGAEEAKRLGA
RILKVAFNFHEPWNDYPWNSPDWPQEAWRTWTPPPEDIAKHPYWKSLFQM
DFDTFVLIVYSNVARSSPDPEDWKSWLDPWYWVFKEPTAEQLRDETAQFY
ALTEHLLTHYPGKTFVLQMWEGDWTLRQDLPVDQRFNVSASVPRALADRM
VKWLAARQLGVTKARRAVGSKAGTAKVFHAAEVNLVWASAQELTRKGHGG
RRQDMVTAVLPRVALDMISYSAYDSTLIPEASTGAFFESIRFIQRMHRRT
PEAPEKCVYVGEFGVNTMSTDWDDSMEKIKNTVNVGAAAGLAFIVYWQMY
DNALNPKGKEHFGVDLCDSRMVAKGPVYDQQYLEGFFLQHPDMEYLRPPA
SYWTKMLQGKLDET back to topmRNA from alignment at KK037248.1:166194..168349- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8245 ID=rna8245|Name=rna8245|organism=Nannochloropsis gaditana|type=mRNA|length=2156bp|location=Sequence derived from alignment at KK037248.1:166194..168349- (Nannochloropsis gaditana)
GTGTGTCTTACTCGCGGGACAAATGTAACCTTTCATGGTGCTCCTCCCAC
TGCATCTGTCTCCACGCGTCCGTATCGTCCTTATTTTCCCTTCCTCTAAC
CGCCACAGGGGGTCCAGGGGAGGAATTGGAAATTGTGCCTTCCGACGTCA
TGCATGCACACGACTCAATTTTCATGCATCCTGCTCACAAAGAATTCAAA
TTGGTCTGAATCAACCAGGACAGCCGCAATCTAGGGAAGCAAGGGCGTCG
TACGCCCCCGTGCCCGTAAAGGGAATATGCACCGACCCTTGGAAGTGGAG
ACTCGGACAAATTACCACCACAGGCCATTAGAGAGGATTGGAGGCGGTGC
CGACGTGGTGACCGGCGAAGGATTATGTGCGCTTGCTCGACAGCATGCAT
CGAAGCTTATCATTTTGATCGTGGTGGCCCTCGTAATAGCGACCCTTTCC
ACTCAGCACTCGATGAACGGCTCGGATGAGGGCAACTTTGCAGGCGCCCT
GGACCCTGGAAACGGGGGCAGCGATGCTGAGTCAATTGAAGCAATGAGTG
AATGCCTGGAAAACATCGACTTCGAGGATTTTGGCTCCTTTTTTGGGGGC
GTGTCACGCCGGGATTGTGCAGCTTTCTGTACCGCCATGCCCAACTGCAG
GGTCTGGCAGCATGTGGCCACGTCAGGAGGAAGCTGTAATACCCGATATA
GTAACCATACGGGCTTTGTATCAATGCATGCAGGTGTGGAATCCTGCGTA
CAGCTGTCTCACAAGCCGCCCGACATGACCAAATTTCTTGGAGTCGCGCA
CTGGCAGGGCTGCTACTTTAAAAGCGCGAAGCCATTTCTCCTAGACGGAG
CGGAGGAGGCGAAGCGCCTCGGCGCCAGGATCCTGAAAGTGGCATTCAAT
TTCCATGAGCCTTGGAATGACTACCCCTGGAACTCTCCGGACTGGCCTCA
GGAAGCTTGGCGCACGTGGACCCCTCCCCCGGAGGACATAGCCAAGCACC
CGTATTGGAAGTCGCTCTTCCAGATGGACTTCGACACTTTCGTCCTTATT
GTCTACTCTAACGTAGCGCGGAGCTCTCCGGATCCCGAAGATTGGAAGTC
GTGGCTAGACCCCTGGTACTGGGTCTTCAAGGAGCCCACCGCGGAGCAGC
TGCGCGACGAGACCGCCCAGTTCTACGCACTGACCGAGCACTTGCTCACC
CACTACCCGGGCAAAACCTTTGTGCTCCAGATGTGGGAAGGAGATTGGAC
GCTGCGGCAGGACCTGCCGGTGGATCAGCGGTTCAATGTGAGCGCCTCGG
TGCCCAGGGCGCTAGCGGACCGGATGGTCAAGTGGTTGGCGGCGAGGCAG
CTGGGGGTCACCAAAGCCCGCCGCGCTGTCGGCAGCAAGGCCGGCACAGC
CAAGGTCTTCCACGCCGCGGAGGTGAATCTGGTTTGGGCCTCTGCGCAGG
AGTTAACCCGCAAGGGCCACGGTGGGAGGCGTCAGGATATGGTGACTGCA
GTCCTCCCACGGGTGGCTCTCGACATGATCTCGTATTCAGCGTACGACTC
GACTCTTATTCCTGAAGCCTCCACCGGGGCCTTTTTTGAGTCCATCCGAT
TTATTCAACGCATGCACAGGCGCACCCCTGAGGCTCCAGAGAAGTGCGTG
TATGTTGGCGAGTTCGGCGTGAACACCATGAGCACGGACTGGGATGACTC
CATGGAGAAGATCAAGAATACAGTCAACGTGGGAGCAGCCGCAGGTCTTG
CCTTTATAGTCTACTGGCAAATGTATGACAACGCACTGAATCCCAAAGGA
AAGGAGCATTTTGGAGTTGACCTTTGCGATTCGCGCATGGTTGCAAAGGG
CCCTGTTTATGATCAACAATATCTCGAAGGCTTTTTCCTACAGCACCCAG
ACATGGAATATCTGCGGCCGCCCGCCTCGTACTGGACAAAGATGCTCCAG
GGAAAACTGGACGAGACGTAGCACTAAAAAAAGTGCATGTGTACATAGAT
TTGATAACACAAAACAAGCATGGACATTTCTGAAGAGCCAGCATAAAGAA
CGCTTCAAATCTTTCTACCAACAATTGCGAGGCAGCCATTGTAATATTAT
GTCAAGTATACCTGTTATCGCTATGTTAGGTCTGCGAGGGATTGTATTCC
TCTTTA back to topCoding sequence (CDS) from alignment at KK037248.1:166194..168349- >rna8245 ID=rna8245|Name=rna8245|organism=Nannochloropsis gaditana|type=CDS|length=1695bp|location=Sequence derived from alignment at KK037248.1:166194..168349- (Nannochloropsis gaditana)
ATGCACCGACCCTTGGAAGTGGAGACTCGGACAAATTACCACCACAGGCC
ATTAGAGAGGATTGGAGGCGGTGCCGACGTGGTGACCGGCGAAGGATTAT
GTGCGCTTGCTCGACAGCATGCATCGAAGCTTATCATTTTGATCGTGGTG
GCCCTCGTAATAGCGACCCTTTCCACTCAGCACTCGATGAACGGCTCGGA
TGAGGGCAACTTTGCAGGCGCCCTGGACCCTGGAAACGGGGGCAGCGATG
CTGAGTCAATTGAAGCAATGAGTGAATGCCTGGAAAACATCGACTTCGAG
GATTTTGGCTCCTTTTTTGGGGGCGTGTCACGCCGGGATTGTGCAGCTTT
CTGTACCGCCATGCCCAACTGCAGGGTCTGGCAGCATGTGGCCACGTCAG
GAGGAAGCTGTAATACCCGATATAGTAACCATACGGGCTTTGTATCAATG
CATGCAGGTGTGGAATCCTGCGTACAGCTGTCTCACAAGCCGCCCGACAT
GACCAAATTTCTTGGAGTCGCGCACTGGCAGGGCTGCTACTTTAAAAGCG
CGAAGCCATTTCTCCTAGACGGAGCGGAGGAGGCGAAGCGCCTCGGCGCC
AGGATCCTGAAAGTGGCATTCAATTTCCATGAGCCTTGGAATGACTACCC
CTGGAACTCTCCGGACTGGCCTCAGGAAGCTTGGCGCACGTGGACCCCTC
CCCCGGAGGACATAGCCAAGCACCCGTATTGGAAGTCGCTCTTCCAGATG
GACTTCGACACTTTCGTCCTTATTGTCTACTCTAACGTAGCGCGGAGCTC
TCCGGATCCCGAAGATTGGAAGTCGTGGCTAGACCCCTGGTACTGGGTCT
TCAAGGAGCCCACCGCGGAGCAGCTGCGCGACGAGACCGCCCAGTTCTAC
GCACTGACCGAGCACTTGCTCACCCACTACCCGGGCAAAACCTTTGTGCT
CCAGATGTGGGAAGGAGATTGGACGCTGCGGCAGGACCTGCCGGTGGATC
AGCGGTTCAATGTGAGCGCCTCGGTGCCCAGGGCGCTAGCGGACCGGATG
GTCAAGTGGTTGGCGGCGAGGCAGCTGGGGGTCACCAAAGCCCGCCGCGC
TGTCGGCAGCAAGGCCGGCACAGCCAAGGTCTTCCACGCCGCGGAGGTGA
ATCTGGTTTGGGCCTCTGCGCAGGAGTTAACCCGCAAGGGCCACGGTGGG
AGGCGTCAGGATATGGTGACTGCAGTCCTCCCACGGGTGGCTCTCGACAT
GATCTCGTATTCAGCGTACGACTCGACTCTTATTCCTGAAGCCTCCACCG
GGGCCTTTTTTGAGTCCATCCGATTTATTCAACGCATGCACAGGCGCACC
CCTGAGGCTCCAGAGAAGTGCGTGTATGTTGGCGAGTTCGGCGTGAACAC
CATGAGCACGGACTGGGATGACTCCATGGAGAAGATCAAGAATACAGTCA
ACGTGGGAGCAGCCGCAGGTCTTGCCTTTATAGTCTACTGGCAAATGTAT
GACAACGCACTGAATCCCAAAGGAAAGGAGCATTTTGGAGTTGACCTTTG
CGATTCGCGCATGGTTGCAAAGGGCCCTGTTTATGATCAACAATATCTCG
AAGGCTTTTTCCTACAGCACCCAGACATGGAATATCTGCGGCCGCCCGCC
TCGTACTGGACAAAGATGCTCCAGGGAAAACTGGACGAGACGTAG back to top
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