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Properties
| Property Name | Value |
|---|
| Product | Beta-lactamase/transpeptidase-like protein |
| Orig transcript id | gnl|cribi|Naga_100011g50.3429.mrna |
| Orig protein id | gnl|cribi|Naga_100011g50.3429 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:153949..156091 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8239 ID=rna8239|Name=rna8239|organism=Nannochloropsis gaditana|type=mRNA|length=1254bp
GCTACGACTACTGAGTCGGCAATCTCAAAGGGGTTTGTATACCCATGACA
GGGTCGACGACATCGATTCGATCCAAGCAAAGCGTGGCAGAGGGTAGGAA
TATTTGACTATAAAACCTGCTCTTCCATCCCGGTTGCTTTCGATATGCAC
ATTGCAGTTCATCACGAGAAAGAGAGGCGGTCAGTGCGGATCATTCTCTA
CAATGGATGGTTGCGCGATTGGACCTACCCACGTTTATGGATGAAGTCGC
TGGCAATCCATTTGAGCCATACGCAATATTGTGTATTGGGCGAAGGTGGG
CACGGTCTTGTAGACATTGACGTGGAAATTGTAGGCAATACTGTTCCCGT
GCAGACCGCTGACTCGGGAAGGTACATCAAGCACTTGTCTGATATGGTGG
GTCCCGCCGGGCCGGACGAGAACACTTTTTTCATTGGACAAAGCATTGGC
TGTCTGGTAATTTTGCGTTACCTGGCGTGTTTGCCGCCGGGCTTCAAGGT
ATGTATCTATGCGTGTGGAAAAAAATATTGTTTCATTTTCCCAAGCGGAT
CCTATGAGTATCAACTAGCAAATCATGGCACTTAACGCCATGTGAAAAGA
AACGATGAACAACGTCGTTTTTTTCCTCGCCACTGATGATTTAGATCGGC
GGTTGCCTTTTTGTGGGTTGCTGGTTGTCTCTGGATCACACAACACAACG
AAGACGATCTCCCGCTATCGACGACCTCATCAGGACCGAGTGGGATACAT
TCAAGGAAGGATGGATGAATCACAATGATGTCGACTTTGCGGCCGTCCGG
CGCGTCTGCAAACCTGGCAAGCTGCTTTGTCTCATAGCGGACAATGATCC
GTATCGGGGACTCGATGACAACGGCGTGAGCAACAAGCGAGACTTTGAAG
AGACTGTGGGCGCGGAAGTCATTCTTCGTCATGGGAAAGGCCATTTTAAC
ACTTCTAAATTGGATGAGGAGGACACGAGATTGATCGAAGAAAAATTACT
CAACTTTATGCGCTCTGAAGCCGGAGACGTTCGGATACCACATCCAAGAA
CTTCTAGATTGTGAATTCAGATAGGCAAAAATAAGACACACTACCTTCGA
CTTCTTATAGCATGTTTCTTTTCTTCTTTATTTTTTACAATCTAAAGCCA
AAAGTCCTCAATCCGAAAGCTTTTGGGCGTATCACTTGTCACAGCAGGCT
ATAATCACCGCAAGTAATAAAAGGTATTGCGGACTCAACTTTCAGGTGCT
CTGC back to topprotein sequence of rna8239 >rna8239-protein ID=rna8239-protein|Name=rna8239|organism=Nannochloropsis gaditana|type=polypeptide|length=518bp
MQKNMRLHVLVGGLTALMCLGIVRGIGTMSPEAANLDRQRLEEITRDLQA
QVSRNQLPGAAFQVYRAGKLVFQDAVGYQDRELMRPMGMNTIVRLMSQTK
PLVAAGVMILLERDLISLDDPLWKYYPKFRNVRVLKSDGAKETVPANRDI
TILDLLLHTAGLGYGGGFNDPSGDSPLATMEIPFETLEYFMNEQASKPLY
WQPGTTWRYSWSYDVLGYVIKRVTGQSPDIWLRQNLFEPLEMYDTDFYVP
MDKIGRFAVAYTMTRSNILIPIIRPRMDPIQAFNPPPFISCGSGIVSTLH
DYGRFTMMLMNGGVIDGKRILKSETVDMMWRNQLDLSLLPMDLNGWQSDM
NTGWGFGFTVSAPGPLPDVDWSKHKGSNRTGAIGWGGGMMTNWIASADND
LIVLFATQRLATPIPNTFQEIVVQGVMDSIKGNSPRKLPGPEGPAVEFEV
DDGINHAGGRNNNNGGFGGLWGNQWRLAADEEEVLTSLEPKEAGRSQPQQ
EMTEETDKLHARLRSSNV back to topmRNA from alignment at KK037248.1:153949..156091- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8239 ID=rna8239|Name=rna8239|organism=Nannochloropsis gaditana|type=mRNA|length=2143bp|location=Sequence derived from alignment at KK037248.1:153949..156091- (Nannochloropsis gaditana)
CGCTTCCTTTCCCTTCCTCTCGCAAGGATCGTCTCTTTCTCCCCGCAGGG
TCCTTTTCAATGTATGCCCTGGTAGCCGGAAGATGATGTCCCCCTTACCC
CCTCGTGCGTGTACATGCCTGCACGCTTCCTTACTTCCATCGACATGGGC
CGTCAGCCTCCTCACACACATGCTTTCCGACCTGCCCAATCACCACCCAT
AGCCAACGGTCCCCGCGTTTCCATTCCATCCTTTCCCCCCCAAAAATACA
TGGTTGTTTGCGAGCTACCCTAATTTTGCTGAGTTCACTCCCATTTTCCA
ACCTATCCCTACCGTATCCTCGTGTCCTGCCTAGGAGACCAAGAGCATGC
AAAAAAATATGCGGCTTCATGTTTTGGTAGGAGGCCTTACCGCCTTAATG
TGCCTGGGTATAGTCCGAGGAATCGGGACCATGAGCCCAGAAGCTGCCAA
CCTTGACCGTCAGCGTCTAGAGGAGATCACGAGGGATTTGCAGGCGCAAG
TAAGCCGCAACCAGCTCCCCGGAGCGGCATTTCAAGTTTACCGAGCGGGA
AAGCTCGTCTTCCAGGACGCAGTGGGGTATCAAGATCGCGAGCTGATGCG
GCCTATGGGCATGAACACAATTGTTCGTCTCATGTCCCAGACAAAACCAC
TCGTTGCCGCGGGTGTAATGATTTTATTGGAGCGAGATCTGATTAGCTTG
GACGATCCGTTGTGGAAGTATTACCCCAAATTTCGCAATGTACGAGTCCT
CAAGTCGGATGGAGCCAAAGAAACGGTACCGGCGAACCGGGACATTACCA
TTCTCGACCTGTTGCTGCATACGGCAGGCCTCGGCTACGGTGGGGGCTTC
AATGACCCGAGCGGGGACAGCCCCCTTGCAACCATGGAGATTCCCTTCGA
GACCCTCGAGTACTTCATGAATGAACAAGCCAGTAAGCCGCTCTATTGGC
AGCCGGGCACCACCTGGCGCTACTCGTGGAGCTACGACGTGCTGGGCTAC
GTAATCAAACGTGTCACAGGACAGTCGCCCGATATCTGGCTTCGTCAAAA
CCTCTTCGAGCCCCTAGAGATGTACGACACGGACTTCTATGTGCCCATGG
ACAAGATCGGTCGCTTCGCAGTCGCCTACACGATGACGCGTTCGAACATC
CTGATTCCCATCATCCGTCCCCGCATGGACCCCATCCAGGCCTTCAACCC
GCCCCCCTTCATCTCCTGCGGCTCGGGCATCGTCTCCACACTCCATGACT
ACGGCCGGTTCACAATGATGCTGATGAACGGTGGTGTCATTGACGGGAAG
CGGATTCTCAAATCCGAGACCGTGGACATGATGTGGCGCAACCAGCTGGA
CCTCTCTTTGCTGCCCATGGACTTGAACGGGTGGCAGTCAGACATGAACA
CGGGCTGGGGCTTCGGCTTCACCGTCTCGGCGCCTGGGCCTCTGCCTGAC
GTTGACTGGAGCAAGCACAAGGGCTCGAATCGGACCGGCGCTATCGGATG
GGGCGGGGGTATGATGACCAATTGGATCGCATCGGCCGACAATGATCTCA
TTGTTCTCTTCGCTACTCAGCGCCTGGCCACGCCTATCCCCAACACGTTT
CAGGAAATCGTAGTGCAGGGCGTTATGGACTCTATCAAAGGCAATTCTCC
ACGTAAACTGCCCGGTCCCGAAGGCCCTGCCGTCGAATTCGAGGTTGATG
ACGGCATCAATCACGCCGGGGGAAGGAACAATAACAACGGGGGGTTCGGA
GGCCTGTGGGGAAACCAGTGGCGGCTCGCAGCAGACGAGGAGGAGGTCCT
GACATCACTAGAGCCAAAGGAAGCTGGAAGGAGTCAGCCTCAGCAGGAAA
TGACTGAGGAAACGGACAAGCTGCATGCTCGACTCCGCAGTAGCAACGTT
TGAACATAGCAAGGGAATTGTCGAATAATGCCTGTCTTCATACACTCATA
ATAGTACCTTATAGGTTTGATTGGTCATACTATGACACATTGCCAAATGT
CACACATCATTCGCCTGGGAGCAAAGGCAGATGAATTTCTGGCGCTCCAG
ATCACTTACTCATATATAAACCATAAAGACGCGATTTTTCAGCTTAGGGA
TTACAGCCGCAAAGAAGGAAAATAAGGGTTTAGGACGACTGAG back to topCoding sequence (CDS) from alignment at KK037248.1:153949..156091- >rna8239 ID=rna8239|Name=rna8239|organism=Nannochloropsis gaditana|type=CDS|length=1557bp|location=Sequence derived from alignment at KK037248.1:153949..156091- (Nannochloropsis gaditana)
ATGCAAAAAAATATGCGGCTTCATGTTTTGGTAGGAGGCCTTACCGCCTT
AATGTGCCTGGGTATAGTCCGAGGAATCGGGACCATGAGCCCAGAAGCTG
CCAACCTTGACCGTCAGCGTCTAGAGGAGATCACGAGGGATTTGCAGGCG
CAAGTAAGCCGCAACCAGCTCCCCGGAGCGGCATTTCAAGTTTACCGAGC
GGGAAAGCTCGTCTTCCAGGACGCAGTGGGGTATCAAGATCGCGAGCTGA
TGCGGCCTATGGGCATGAACACAATTGTTCGTCTCATGTCCCAGACAAAA
CCACTCGTTGCCGCGGGTGTAATGATTTTATTGGAGCGAGATCTGATTAG
CTTGGACGATCCGTTGTGGAAGTATTACCCCAAATTTCGCAATGTACGAG
TCCTCAAGTCGGATGGAGCCAAAGAAACGGTACCGGCGAACCGGGACATT
ACCATTCTCGACCTGTTGCTGCATACGGCAGGCCTCGGCTACGGTGGGGG
CTTCAATGACCCGAGCGGGGACAGCCCCCTTGCAACCATGGAGATTCCCT
TCGAGACCCTCGAGTACTTCATGAATGAACAAGCCAGTAAGCCGCTCTAT
TGGCAGCCGGGCACCACCTGGCGCTACTCGTGGAGCTACGACGTGCTGGG
CTACGTAATCAAACGTGTCACAGGACAGTCGCCCGATATCTGGCTTCGTC
AAAACCTCTTCGAGCCCCTAGAGATGTACGACACGGACTTCTATGTGCCC
ATGGACAAGATCGGTCGCTTCGCAGTCGCCTACACGATGACGCGTTCGAA
CATCCTGATTCCCATCATCCGTCCCCGCATGGACCCCATCCAGGCCTTCA
ACCCGCCCCCCTTCATCTCCTGCGGCTCGGGCATCGTCTCCACACTCCAT
GACTACGGCCGGTTCACAATGATGCTGATGAACGGTGGTGTCATTGACGG
GAAGCGGATTCTCAAATCCGAGACCGTGGACATGATGTGGCGCAACCAGC
TGGACCTCTCTTTGCTGCCCATGGACTTGAACGGGTGGCAGTCAGACATG
AACACGGGCTGGGGCTTCGGCTTCACCGTCTCGGCGCCTGGGCCTCTGCC
TGACGTTGACTGGAGCAAGCACAAGGGCTCGAATCGGACCGGCGCTATCG
GATGGGGCGGGGGTATGATGACCAATTGGATCGCATCGGCCGACAATGAT
CTCATTGTTCTCTTCGCTACTCAGCGCCTGGCCACGCCTATCCCCAACAC
GTTTCAGGAAATCGTAGTGCAGGGCGTTATGGACTCTATCAAAGGCAATT
CTCCACGTAAACTGCCCGGTCCCGAAGGCCCTGCCGTCGAATTCGAGGTT
GATGACGGCATCAATCACGCCGGGGGAAGGAACAATAACAACGGGGGGTT
CGGAGGCCTGTGGGGAAACCAGTGGCGGCTCGCAGCAGACGAGGAGGAGG
TCCTGACATCACTAGAGCCAAAGGAAGCTGGAAGGAGTCAGCCTCAGCAG
GAAATGACTGAGGAAACGGACAAGCTGCATGCTCGACTCCGCAGTAGCAA
CGTTTGA back to top
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