rna8237, rna8237 (mRNA) Nannochloropsis gaditana

Overview
Namerna8237
Unique Namerna8237
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length984
Alignment locationKK037248.1:150330..152058 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g48.3492.mrna
Orig protein idgnl|cribi|Naga_100011g48.3492
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:150330..152058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100011g48gene7978Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8237rna8237-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22492.1cds8213Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8237 ID=rna8237|Name=rna8237|organism=Nannochloropsis gaditana|type=mRNA|length=984bp
ATGAGTATAGACATCAGTAAACATTGGTCTGTGCTTTTCTACTGCCAGGA
CTTCGGAGCCCACGGGCAAGGTAAGAGAAATCTTCAGACGTTTTTTCTTT
TCACCTCACGAGAAAATTCCCGTATACTAAAGGCGGTCGCGAGCACAGCA
CTGACAATGACTGTATCAAGTGATGAAATCAAGGCTTGGCTTCCCATGTA
TAAACCTTTAGATAAGGTCCGGCTTCGAATTTTGTGCTTTCCAAGCGCTG
GTAGCGCCGAAAATATTTACACCGGTCCGGCGGTGCGTGGGACGCGGCGG
GAACCAAACAAGTTGGTTTCTTGGGCAAAGGATGCCCGAGCAGAGATTCT
AGCAATTCAATATCCAGGTCGTGAGCAGCGACGGAAAGAGCCCTTTATTA
AGACATGTCAAGCCATGGCGGCAGCAATTCTCCCTGTGGTCCAGGAGAAA
CTGAAAGAGGAAGACGTACCTTATGTTTTGATCGCCCACAGCTGCGGAAA
CTGGATCGCCTATGAAATGCTCTGTTTGATTAAAACAATGGCTATGCCTA
TGCCAAGCATGTTTTTTGTCTCCTGCATGGCTTCACCAGACATTGCTGCA
AGTGCCAAGCCATGGAAACCCAATAGGGAGATGAATGTCTCTCAACTTCA
AGCCGAGTGCCGCCTGTGGGATGTAAACGAGATCGTCTTTCGGCCGGATG
TTTGGCCAAATTTCGAGCCGCTCCTCCGGGCAGATTTCACACTGTTTGAT
CAATATAAGCACAACATTGAAGCTTTCCACAAATTTGACTTCCCCATTCA
TGGCTACTGCGCCTCGAAAGACCGCAAAATCTCGAAGAAAATGGTTGAGG
GGTGGCGAAACTTTACAAGGTCTGATTTTGACATGGAACTTATCCAAGGA
AACCATCTCTTTGTATACAATGCGGATGCTCGCGACAGCTGGTTCGAAAG
CATTACAGATTTGTTGGTAGCCGAAGGCTTTTGA
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protein sequence of rna8237

>rna8237-protein ID=rna8237-protein|Name=rna8237|organism=Nannochloropsis gaditana|type=polypeptide|length=285bp
MGGGQSIAAAAPEPLEFTMSSSASLPKAYRHLCHFPVLAKQARGPIRHHP
NERITHFLKEQDATALLIADYLSVRERLVFLQTHKVGLPPKHLKHLLFSG
PSRELKFLYSPATTAMVEGKHPVSSSFNNNLKETKTEIYATNNFGNTFQL
EIRYRGSFLSRAVPLSLVSTALHRVIRSWMDDTLRKRGFSTLLTMVNRLL
SVFRPTEEVWYTIINSFGKDGTTLLTYACSSRDTPLSVIEKLLQIPCFDL
ALPDHKFGLNAIQLAHMHDRQDVLAHFASLVGLQR
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mRNA from alignment at KK037248.1:150330..152058-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8237 ID=rna8237|Name=rna8237|organism=Nannochloropsis gaditana|type=mRNA|length=1729bp|location=Sequence derived from alignment at KK037248.1:150330..152058- (Nannochloropsis gaditana)
TATCATCATATTTAAAGTATGCTGTTGAATTATCTTGATTTCGTTGGAAA
TTTCACGAGTCCAGGAAAGAGTTGCACTATCCGAGAGAGAGCCACGAGGT
GTCGGGTGATGGAAAAAAAAACACATGTACGCATGATTCACACGATATAC
CCAGTATTTCAGGCGTCGCAAAACTCATTTGCCCTATTAAGATAAAGCCC
GATAAAAGTCCTACTTACACAGGGGAATGTGTCAATATTCAGCCAAAGCA
TGTGTTAATACTGGAACGGCAACTAAAAAAAAACATTTCGGTTCCTACCA
ACATGTGTTTCGACGTCAACAGAATTTAAGCCTTTAAGCCCAAGTTTGTC
AACATATTTCTATCCTTACGATAACAGCAATCAGAACTGAGCATATTAGG
CACCTTTATCCTGCAACTTAGCTGAAATGGGAGGTGGCCAATCCATTGCA
GCTGCAGCTCCAGAGCCACTTGAGTTTACAATGTCTTCAAGTGCTTCGTT
ACCTAAAGCATATCGTCACTTGTGTCATTTTCCTGTTCTGGCAAAGCAAG
CTCGTGGCCCAATCCGTCACCATCCAAACGAACGAATCACACAGTGAGTG
CGAGCTTGGGATAGCATTGCCTGCTCTGCTTACACGTGGACAGAACGTCA
TCTTTCGAAGGCCACATTTGCTCAAACATATCTCAGAATATGCATCGCAT
AATAGTCCATTAAAAGAATACTACACATTACATGACAGCTTCCTCAAAGA
ACAGGATGCGACCGCTCTTCTGATTGCGGACTACTTATCCGTGCGAGAAC
GTCTCGTCTTCCTGCAGACTCACAAGTAAGCTCAAGAGATGATGCGAAGG
ATTTTTTTGTGTGAGAAATTGGACTCTTAATTTAGTGTTGGATAATACAC
TTTAATGGGTGTATTTAATTTCGCTTTTCTCTCTCCAATACAACCTAAAC
CAAGACCAAACAATTTATGATCGTCCACTACTGTTATGCACTTTCAATGC
ACATTGTATATAAAGTAAAGTAACCGAACGAGTCAAATGCCGTATCGAAA
TTACAGGGTGGGCCTTCCGCCGAAGCATCTGAAACATTTATTATTCAGCG
GACCTTCGCGGGAACTGAAATTTCTGTATAGTCCCGCGACTACCGCTATG
GTAGAGGGGAAGCACCCAGTCTCGAGTTCTTTCAATAACAACTTAAAGGA
GACCAAGACTGAAATATACGCCACGAATAATTTTGGCAACACATTCCAGC
TCGAGATTCGGTATCGAGGGAGTTTTTTGTCCAGAGCGGTGCCCTTGTCA
TTGGTGTCTACCGCGCTTCATCGCGTTATTCGGAGTTGGATGGACGACAC
ATTACGCAAGCGTGGATTTTCAACTCTTCTGACTATGGTCAACAGGCTCT
TATCTGTATTCCGACCAACAGAAGAAGTCTGGTACACCATCATCAACAGC
TTTGGGAAAGACGGGACTACCTTGCTCACATACGCCTGCAGTAGCCGGGA
TACACCGTTGTCTGTTATAGAAAAACTACTACAAATACCTTGTTTCGACC
TGGCACTCCCTGATCACAAGTTTGGCCTCAATGCCATCCAGCTTGCACAC
ATGCACGATCGTCAGGACGTACTCGCACATTTCGCCTCGCTGGTAGGGCT
TCAAAGATGAACTTAATGCAAGAGCTTGCAATCATTCGAATGATTTTTGT
TTCTTATGTATAGAAGAGAAACGAGAGCG
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Coding sequence (CDS) from alignment at KK037248.1:150330..152058-

>rna8237 ID=rna8237|Name=rna8237|organism=Nannochloropsis gaditana|type=CDS|length=2574bp|location=Sequence derived from alignment at KK037248.1:150330..152058- (Nannochloropsis gaditana)
GGTGGGCCTTCCGCCGAAGCATCTGAAACATTTATTATTCAGCGGACCTT
CGCGGGAACTGAAATTTCTGTATAGTCCCGCGACTACCGCTATGGTAGAG
GGGAAGCACCCAGTCTCGAGTTCTTTCAATAACAACTTAAAGGAGACCAA
GACTGAAATATACGCCACGAATAATTTTGGCAACACATTCCAGCTCGAGA
TTCGGTATCGAGGGAGTTTTTTGTCCAGAGCGGTGCCCTTGTCATTGGTG
TCTACCGCGCTTCATCGCGTTATTCGGAGTTGGATGGACGACACATTACG
CAAGCGTGGATTTTCAACTCTTCTGACTATGGTCAACAGGCTCTTATCTG
TATTCCGACCAACAGAAGAAGTCTGGTACACCATCATCAACAGCTTTGGG
AAAGACGGGACTACCTTGCTCACATACGCCTGCAGTAGCCGGGATACACC
GTTGTCTGTTATAGAAAAACTACTACAAATACCTTGTTTCGACCTGGCAC
TCCCTGATCACAAGTTTGGCCTCAATGCCATCCAGCTTGCACACATGCAC
GATCGTCAGGACGTACTCGCACATTTCGCCTCGCTGGTAGGGCTTCAAAG
ATGACTTCCTCAAAGAACAGGATGCGACCGCTCTTCTGATTGCGGACTAC
TTATCCGTGCGAGAACGTCTCGTCTTCCTGCAGACTCACAAATGGGAGGT
GGCCAATCCATTGCAGCTGCAGCTCCAGAGCCACTTGAGTTTACAATGTC
TTCAAGTGCTTCGTTACCTAAAGCATATCGTCACTTGTGTCATTTTCCTG
TTCTGGCAAAGCAAGCTCGTGGCCCAATCCGTCACCATCCAAACGAACGA
ATCACACAGGTGGGCCTTCCGCCGAAGCATCTGAAACATTTATTATTCAG
CGGACCTTCGCGGGAACTGAAATTTCTGTATAGTCCCGCGACTACCGCTA
TGGTAGAGGGGAAGCACCCAGTCTCGAGTTCTTTCAATAACAACTTAAAG
GAGACCAAGACTGAAATATACGCCACGAATAATTTTGGCAACACATTCCA
GCTCGAGATTCGGTATCGAGGGAGTTTTTTGTCCAGAGCGGTGCCCTTGT
CATTGGTGTCTACCGCGCTTCATCGCGTTATTCGGAGTTGGATGGACGAC
ACATTACGCAAGCGTGGATTTTCAACTCTTCTGACTATGGTCAACAGGCT
CTTATCTGTATTCCGACCAACAGAAGAAGTCTGGTACACCATCATCAACA
GCTTTGGGAAAGACGGGACTACCTTGCTCACATACGCCTGCAGTAGCCGG
GATACACCGTTGTCTGTTATAGAAAAACTACTACAAATACCTTGTTTCGA
CCTGGCACTCCCTGATCACAAGTTTGGCCTCAATGCCATCCAGCTTGCAC
ACATGCACGATCGTCAGGACGTACTCGCACATTTCGCCTCGCTGGTAGGG
CTTCAAAGATGACTTCCTCAAAGAACAGGATGCGACCGCTCTTCTGATTG
CGGACTACTTATCCGTGCGAGAACGTCTCGTCTTCCTGCAGACTCACAAA
TGGGAGGTGGCCAATCCATTGCAGCTGCAGCTCCAGAGCCACTTGAGTTT
ACAATGTCTTCAAGTGCTTCGTTACCTAAAGCATATCGTCACTTGTGTCA
TTTTCCTGTTCTGGCAAAGCAAGCTCGTGGCCCAATCCGTCACCATCCAA
ACGAACGAATCACACAGGTGGGCCTTCCGCCGAAGCATCTGAAACATTTA
TTATTCAGCGGACCTTCGCGGGAACTGAAATTTCTGTATAGTCCCGCGAC
TACCGCTATGGTAGAGGGGAAGCACCCAGTCTCGAGTTCTTTCAATAACA
ACTTAAAGGAGACCAAGACTGAAATATACGCCACGAATAATTTTGGCAAC
ACATTCCAGCTCGAGATTCGGTATCGAGGGAGTTTTTTGTCCAGAGCGGT
GCCCTTGTCATTGGTGTCTACCGCGCTTCATCGCGTTATTCGGAGTTGGA
TGGACGACACATTACGCAAGCGTGGATTTTCAACTCTTCTGACTATGGTC
AACAGGCTCTTATCTGTATTCCGACCAACAGAAGAAGTCTGGTACACCAT
CATCAACAGCTTTGGGAAAGACGGGACTACCTTGCTCACATACGCCTGCA
GTAGCCGGGATACACCGTTGTCTGTTATAGAAAAACTACTACAAATACCT
TGTTTCGACCTGGCACTCCCTGATCACAAGTTTGGCCTCAATGCCATCCA
GCTTGCACACATGCACGATCGTCAGGACGTACTCGCACATTTCGCCTCGC
TGGTAGGGCTTCAAAGATGACTTCCTCAAAGAACAGGATGCGACCGCTCT
TCTGATTGCGGACTACTTATCCGTGCGAGAACGTCTCGTCTTCCTGCAGA
CTCACAAATGGGAGGTGGCCAATCCATTGCAGCTGCAGCTCCAGAGCCAC
TTGAGTTTACAATGTCTTCAAGTGCTTCGTTACCTAAAGCATATCGTCAC
TTGTGTCATTTTCCTGTTCTGGCAAAGCAAGCTCGTGGCCCAATCCGTCA
CCATCCAAACGAACGAATCACACA
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Synonyms
Publications