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Properties
| Property Name | Value |
|---|
| Product | Thioesterase type II, NRPS/PKS/S-FAS |
| Orig transcript id | gnl|cribi|Naga_100011g47.3473.mrna |
| Orig protein id | gnl|cribi|Naga_100011g47.3473 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:148804..150235 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8236 ID=rna8236|Name=rna8236|organism=Nannochloropsis gaditana|type=mRNA|length=2190bp
ATGCGACACCAAGGTCACTCTGGCCGTCGCAGGGCGCTCTGGATGGTGAG
GGGGCCAGTGCTTGTGCTAATCCTCCTGGCTGAACTCCTTGCACATGGCA
TTCCGCTCGTGCAATGCTTTACAGCCTTGCAAAGGTTTGATTCAAGAAGG
ACACCTGCGGCCGTCGCTTCTGATAGTTACGAAATTCGTAGACAACATAA
GCATAACTACATTTCATGCAGTGCCACCGCGCAAAAGTTGTGGCAGACAA
GTGGAGCCAAGACAATGGAGGAAAGCATGAATCTTTCCCTAAAAGATTTC
AAAGAGCGTATAGAAGCCCAGCGACGAAAGAGTGTGATTGCCGTGCGGGC
TCGACATTTGCTTGTGGAGGTGAAACCTTTGTGCGACAGCCTCTTCGAAG
ACGTGAAGAAGGGGGCTGAGTTTCATGCCCTAGCGGCCGCAATTTCAGCT
TGCTCGGTCACGCGCGACGCAGGCGGAGATGTTGGATGGATCGGCATGGC
GGACGAGTTCATGGAGGACGTCCTTCCGCGGCATGTGCGGGAATTGGCGC
TACAGCATAAACCTGGCGATGTCTTTAAGATTACCAGCCTGCGCGGGTTT
CATCTGGTGAAAATCGAAGATGTCATGTTCGATCTCAGTTACACGAGCAA
ACCGCAAGGACGGGTGCAGGGGCGTGGGCTACTGCCCACGCCCCTCAAGG
AGCTGATGGCAAAAGATAAGGATGATGCAGCTCTCGTGTACGCAGTCGAG
ACCATGGGTTGTGCCATGAACACAGCGGACTCGGAGCGCATGGCGGGTCA
GTTAAGTGCACTGGGCTTTCGGGAAGCTGCCTCATCGGAAGAGGTGGCTA
AGGCGGACGTTGTTGTCGTCAACACCTGCTCCATCCGTGACCATGCAGAG
CAAAAAGTCTACAGTTACTTGGGCCCCTACGTCAACCGCAAGAAGCGCGG
GGACAACCTGGCAATAGTGGTGGCGGGTTGCGTGGCCCAGCAGGAGGGGC
AAGCCATCGTTTCGCGCTTTCCAGAGGTCGATTTAGTGATCGGGCCACAA
TATGCTAATCGACTGGGGGATCTGTTGGAGGAGGTGATGGACGGCAACCA
GGTGGTGGCCACGGAGGCGACTCACATTATGGAGGATGTCAGTAAGCCCC
GAAGGGACAGTGATATTCGTGCCTGGGTCAACATTATCTACGGCTGCAAC
GAACGCTGCACATACTGCGTGGTCCCTACTACTCGCGGAACAGAACAGAG
TCGGCCACGCGAGTCGGTCATTCGAGAAATAGAGGAGCTGGCGCGTTCGG
GCTACCGCGAAATTACGCTCCTGGGCCAGAACATTGATGCCTGGGGCCGA
GACCTGACTCCCAAGCAAAAATTTTCCGATCTCTTGCATGCAGTAGGTCG
AGTAGAAGGAATAAAGCGTGTGCGCTTCGTGACAAGTCATCCTCGGTACA
TGTCTATGAACGTAGTGGATGCTGTGGCCTCCATTCCCAACATGTGCGAG
ATGTTCCACGTACCTGTTCAATCAGGAGACGACGATATTTTGAAGAAAAT
GAGTCGAGGATACACTGTTTCTAAATTCTTGGAGATCGTGGAGCGCATTC
GTTCCCTTCTACCGGATGCTGCCGTGACCTCTGACATCATCGTTGGCTTT
CCCGGTGAGACTGAGGCTCAATTTCAAAACACGCTTCGCCTGATGGAGAT
TGTCAAATTCGACCAGGTCAATACGGCCGCATACAGTCCTAGGCCTAATA
CACCCGCGGCTACATATGAAGACCAAATATCGGACGACGTCAAGTCTGAT
CGCTTGCAAAGGATCAACAAGCTAGCGGCTGAGCATGCGATGGAACGCAA
CCATCGCTACCTGGGTCGAGAGGTTGAGGTATTGGTGGAGAGTCGTCATG
TGAAAGATCCACGCCTCGTCAAAGGCCGCAACCGACAAGGGCGACCTGTG
CTCTTTGAAGGAAACATAGAGGAGCTCCGGGGAAAACTTGTGCCTGTTCT
AATCAAAGAAGTCAGGTCGTACATGCTAGGAACAATTGTAAAAAGGATCC
AAAAATGGGCTCTCATACATATATTTTTAATTAATGATTTCAGTAAACCT
CCCACTTCCACTCCAACGAATGTGAAACTGCGAAGACTTAGAAGTCGGGT
GAAATGCAAATTGATGGCGTTGAAATCGCATGAAAAATAA back to topprotein sequence of rna8236 >rna8236-protein ID=rna8236-protein|Name=rna8236|organism=Nannochloropsis gaditana|type=polypeptide|length=327bp
MSIDISKHWSVLFYCQDFGAHGQGKRNLQTFFLFTSRENSRILKAVASTA
LTMTVSSDEIKAWLPMYKPLDKVRLRILCFPSAGSAENIYTGPAVRGTRR
EPNKLVSWAKDARAEILAIQYPGREQRRKEPFIKTCQAMAAAILPVVQEK
LKEEDVPYVLIAHSCGNWIAYEMLCLIKTMAMPMPSMFFVSCMASPDIAA
SAKPWKPNREMNVSQLQAECRLWDVNEIVFRPDVWPNFEPLLRADFTLFD
QYKHNIEAFHKFDFPIHGYCASKDRKISKKMVEGWRNFTRSDFDMELIQG
NHLFVYNADARDSWFESITDLLVAEGF back to topmRNA from alignment at KK037248.1:148804..150235+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8236 ID=rna8236|Name=rna8236|organism=Nannochloropsis gaditana|type=mRNA|length=1432bp|location=Sequence derived from alignment at KK037248.1:148804..150235+ (Nannochloropsis gaditana)
ATGGTTTTCCCTTCAACgttttttcaaaaaaatgAATGCGGGTCGCTTCC
ATACAAGCTTAGTATCGGGTGTCGGAGACAGCCGTGCGCTATGAATATTG
ATTCTTAATCATATATATCCCGCGAATTTCCTGGAAGAGTATAGACATCA
GTAAACATTGGTCTGTGCTTTTCTACTGCCAGGACTTCGGAGCCCACGGG
CAAGGTAAGAGAAATCTTCAGACgttttttcttttcacctCACGAGAAAA
TTCCCGTATACTAAAGGCGGTCGCGAGCACAGCACTGACAATGACTGTAT
CAAGTGATGAAATCAAGGCTTGGCTTCCCATGTATAAACCTTTAGATAAG
GTCCGGCTTCGAATTTTGTGCTTTCCAAGCGCTGGTAGCGCCGAAAATAT
TTACACCGGTCCGGCGGTGCGTGGGACGCGGCGGGAACCAAACAAGTTGG
TTTCTTGGGCAAAGGATGCCCGAGCAGAGATTCTAGCAATTCAATATCCA
GGTCGTGAGCAGCGACGGAAAGAGCCCTTTATTAAGACATGTCAAGCCAT
GGCGGCAGCAATTCTCCCTGTGGTCCAGGAGAAActgaaagaggaagacg
tacCTTATGTTTTGATCGCCCACAGCTGCGGAAACTGGATCGCCTATGAA
ATGCTCTGTTTGATTAAAACAATGGCTATGCCTATGCCAAGCATGTTTTT
TGTCTCCTGCATGGCTTCACCAGACATTGCTGCAAGTGCCAAGGTATACG
AGTTTTCCATTTCAGCGCTCGTTTTTTGTAAAGCAGTAAAATATTTCCCT
CAGTATTCCTCTATACCACTACAACATTATGCATAGCCATGGAAACCCAA
TAGGGAGATGAATGTCTCTCAACTTCAAGCCGAGTGCCGCCTGTGGGATG
TAAACGAGATCGTCTTTCGGCCGGATGTTTGGCCAAATTTCGAGCCGCTC
CTCCGGGCAGATTTCACACTGTTTGATCAATATAAGCACAACATTGAAGG
TCGGGATATAGTGATGAGGTAATGTGCTTATCCCAACATGCCGAGCGTAT
GACTAAATTTCTTGAAAAACCCTCAACCGAAAACAGCTTTCCACAAATTT
GACTTCCCCATTCATGGCTACTGCGCCTCGAAAGACCGCAAAATCTCGAA
GGTGCGTGATGAAATGGGAAGAGTGGAGTTACCCTTTAAGATCACCAAGT
TTTAGCGATCTTTCTTGACAAAAGACGACATGAAGCTTATAATTGCGACT
CATGTCGCGCATTGCTTTCACATCACACTCTTTAGAAAATGGTTGAGGGG
TGGCGAAACTTTACAAGGTCTGATTTTGACATGGAACTTATCCAAGGAAA
CCATCTCTTTGTATACAATGCGGATGCTCGCGACAGCTGGTTCGAAAGCA
TTACAGATTTGTTGGTAGCCGAAGGCTTTTGA back to topCoding sequence (CDS) from alignment at KK037248.1:148804..150235+ >rna8236 ID=rna8236|Name=rna8236|organism=Nannochloropsis gaditana|type=CDS|length=4920bp|location=Sequence derived from alignment at KK037248.1:148804..150235+ (Nannochloropsis gaditana)
ATGAGTATAGACATCAGTAAACATTGGTCTGTGCTTTTCTACTGCCAGGA
CTTCGGAGCCCACGGGCAAGGTAAGAGAAATCTTCAGACgttttttcttt
tcacctCACGAGAAAATTCCCGTATACTAAAGGCGGTCGCGAGCACAGCA
CTGACAATGACTGTATCAAGTGATGAAATCAAGGCTTGGCTTCCCATGTA
TAAACCTTTAGATAAGGTCCGGCTTCGAATTTTGTGCTTTCCAAGCGCTG
GTAGCGCCGAAAATATTTACACCGGTCCGGCGGTGCGTGGGACGCGGCGG
GAACCAAACAAGTTGGTTTCTTGGGCAAAGGATGCCCGAGCAGAGATTCT
AGCAATTCAATATCCAGGTCGTGAGCAGCGACGGAAAGAGCCCTTTATTA
AGACATGTCAAGCCATGGCGGCAGCAATTCTCCCTGTGGTCCAGGAGAAA
ctgaaagaggaagacgtacCTTATGTTTTGATCGCCCACAGCTGCGGAAA
CTGGATCGCCTATGAAATGCTCTGTTTGATTAAAACAATGGCTATGCCTA
TGCCAAGCATGTTTTTTGTCTCCTGCATGGCTTCACCAGACATTGCTGCA
AGTGCCAAGCCATGGAAACCCAATAGGGAGATGAATGTCTCTCAACTTCA
AGCCGAGTGCCGCCTGTGGGATGTAAACGAGATCGTCTTTCGGCCGGATG
TTTGGCCAAATTTCGAGCCGCTCCTCCGGGCAGATTTCACACTGTTTGAT
CAATATAAGCACAACATTGAAGCTTTCCACAAATTTGACTTCCCCATTCA
TGGCTACTGCGCCTCGAAAGACCGCAAAATCTCGAAGAAAATGGTTGAGG
GGTGGCGAAACTTTACAAGGTCTGATTTTGACATGGAACTTATCCAAGGA
AACCATCTCTTTGTATACAATGCGGATGCTCGCGACAGCTGGTTCGAAAG
CATTACAGATTTGTTGGTAGCCGAAGGCTTTTGAATGAGTATAGACATCA
GTAAACATTGGTCTGTGCTTTTCTACTGCCAGGACTTCGGAGCCCACGGG
CAAGGTAAGAGAAATCTTCAGACgttttttcttttcacctCACGAGAAAA
TTCCCGTATACTAAAGGCGGTCGCGAGCACAGCACTGACAATGACTGTAT
CAAGTGATGAAATCAAGGCTTGGCTTCCCATGTATAAACCTTTAGATAAG
GTCCGGCTTCGAATTTTGTGCTTTCCAAGCGCTGGTAGCGCCGAAAATAT
TTACACCGGTCCGGCGGTGCGTGGGACGCGGCGGGAACCAAACAAGTTGG
TTTCTTGGGCAAAGGATGCCCGAGCAGAGATTCTAGCAATTCAATATCCA
GGTCGTGAGCAGCGACGGAAAGAGCCCTTTATTAAGACATGTCAAGCCAT
GGCGGCAGCAATTCTCCCTGTGGTCCAGGAGAAActgaaagaggaagacg
tacCTTATGTTTTGATCGCCCACAGCTGCGGAAACTGGATCGCCTATGAA
ATGCTCTGTTTGATTAAAACAATGGCTATGCCTATGCCAAGCATGTTTTT
TGTCTCCTGCATGGCTTCACCAGACATTGCTGCAAGTGCCAAGCCATGGA
AACCCAATAGGGAGATGAATGTCTCTCAACTTCAAGCCGAGTGCCGCCTG
TGGGATGTAAACGAGATCGTCTTTCGGCCGGATGTTTGGCCAAATTTCGA
GCCGCTCCTCCGGGCAGATTTCACACTGTTTGATCAATATAAGCACAACA
TTGAAGCTTTCCACAAATTTGACTTCCCCATTCATGGCTACTGCGCCTCG
AAAGACCGCAAAATCTCGAAGAAAATGGTTGAGGGGTGGCGAAACTTTAC
AAGGTCTGATTTTGACATGGAACTTATCCAAGGAAACCATCTCTTTGTAT
ACAATGCGGATGCTCGCGACAGCTGGTTCGAAAGCATTACAGATTTGTTG
GTAGCCGAAGGCTTTTGAATGAGTATAGACATCAGTAAACATTGGTCTGT
GCTTTTCTACTGCCAGGACTTCGGAGCCCACGGGCAAGGTAAGAGAAATC
TTCAGACgttttttcttttcacctCACGAGAAAATTCCCGTATACTAAAG
GCGGTCGCGAGCACAGCACTGACAATGACTGTATCAAGTGATGAAATCAA
GGCTTGGCTTCCCATGTATAAACCTTTAGATAAGGTCCGGCTTCGAATTT
TGTGCTTTCCAAGCGCTGGTAGCGCCGAAAATATTTACACCGGTCCGGCG
GTGCGTGGGACGCGGCGGGAACCAAACAAGTTGGTTTCTTGGGCAAAGGA
TGCCCGAGCAGAGATTCTAGCAATTCAATATCCAGGTCGTGAGCAGCGAC
GGAAAGAGCCCTTTATTAAGACATGTCAAGCCATGGCGGCAGCAATTCTC
CCTGTGGTCCAGGAGAAActgaaagaggaagacgtacCTTATGTTTTGAT
CGCCCACAGCTGCGGAAACTGGATCGCCTATGAAATGCTCTGTTTGATTA
AAACAATGGCTATGCCTATGCCAAGCATGTTTTTTGTCTCCTGCATGGCT
TCACCAGACATTGCTGCAAGTGCCAAGCCATGGAAACCCAATAGGGAGAT
GAATGTCTCTCAACTTCAAGCCGAGTGCCGCCTGTGGGATGTAAACGAGA
TCGTCTTTCGGCCGGATGTTTGGCCAAATTTCGAGCCGCTCCTCCGGGCA
GATTTCACACTGTTTGATCAATATAAGCACAACATTGAAGCTTTCCACAA
ATTTGACTTCCCCATTCATGGCTACTGCGCCTCGAAAGACCGCAAAATCT
CGAAGAAAATGGTTGAGGGGTGGCGAAACTTTACAAGGTCTGATTTTGAC
ATGGAACTTATCCAAGGAAACCATCTCTTTGTATACAATGCGGATGCTCG
CGACAGCTGGTTCGAAAGCATTACAGATTTGTTGGTAGCCGAAGGCTTTT
GAATGAGTATAGACATCAGTAAACATTGGTCTGTGCTTTTCTACTGCCAG
GACTTCGGAGCCCACGGGCAAGGTAAGAGAAATCTTCAGACgttttttct
tttcacctCACGAGAAAATTCCCGTATACTAAAGGCGGTCGCGAGCACAG
CACTGACAATGACTGTATCAAGTGATGAAATCAAGGCTTGGCTTCCCATG
TATAAACCTTTAGATAAGGTCCGGCTTCGAATTTTGTGCTTTCCAAGCGC
TGGTAGCGCCGAAAATATTTACACCGGTCCGGCGGTGCGTGGGACGCGGC
GGGAACCAAACAAGTTGGTTTCTTGGGCAAAGGATGCCCGAGCAGAGATT
CTAGCAATTCAATATCCAGGTCGTGAGCAGCGACGGAAAGAGCCCTTTAT
TAAGACATGTCAAGCCATGGCGGCAGCAATTCTCCCTGTGGTCCAGGAGA
AActgaaagaggaagacgtacCTTATGTTTTGATCGCCCACAGCTGCGGA
AACTGGATCGCCTATGAAATGCTCTGTTTGATTAAAACAATGGCTATGCC
TATGCCAAGCATGTTTTTTGTCTCCTGCATGGCTTCACCAGACATTGCTG
CAAGTGCCAAGCCATGGAAACCCAATAGGGAGATGAATGTCTCTCAACTT
CAAGCCGAGTGCCGCCTGTGGGATGTAAACGAGATCGTCTTTCGGCCGGA
TGTTTGGCCAAATTTCGAGCCGCTCCTCCGGGCAGATTTCACACTGTTTG
ATCAATATAAGCACAACATTGAAGCTTTCCACAAATTTGACTTCCCCATT
CATGGCTACTGCGCCTCGAAAGACCGCAAAATCTCGAAGAAAATGGTTGA
GGGGTGGCGAAACTTTACAAGGTCTGATTTTGACATGGAACTTATCCAAG
GAAACCATCTCTTTGTATACAATGCGGATGCTCGCGACAGCTGGTTCGAA
AGCATTACAGATTTGTTGGTAGCCGAAGGCTTTTGAATGAGTATAGACAT
CAGTAAACATTGGTCTGTGCTTTTCTACTGCCAGGACTTCGGAGCCCACG
GGCAAGGTAAGAGAAATCTTCAGACgttttttcttttcacctCACGAGAA
AATTCCCGTATACTAAAGGCGGTCGCGAGCACAGCACTGACAATGACTGT
ATCAAGTGATGAAATCAAGGCTTGGCTTCCCATGTATAAACCTTTAGATA
AGGTCCGGCTTCGAATTTTGTGCTTTCCAAGCGCTGGTAGCGCCGAAAAT
ATTTACACCGGTCCGGCGGTGCGTGGGACGCGGCGGGAACCAAACAAGTT
GGTTTCTTGGGCAAAGGATGCCCGAGCAGAGATTCTAGCAATTCAATATC
CAGGTCGTGAGCAGCGACGGAAAGAGCCCTTTATTAAGACATGTCAAGCC
ATGGCGGCAGCAATTCTCCCTGTGGTCCAGGAGAAActgaaagaggaaga
cgtacCTTATGTTTTGATCGCCCACAGCTGCGGAAACTGGATCGCCTATG
AAATGCTCTGTTTGATTAAAACAATGGCTATGCCTATGCCAAGCATGTTT
TTTGTCTCCTGCATGGCTTCACCAGACATTGCTGCAAGTGCCAAGCCATG
GAAACCCAATAGGGAGATGAATGTCTCTCAACTTCAAGCCGAGTGCCGCC
TGTGGGATGTAAACGAGATCGTCTTTCGGCCGGATGTTTGGCCAAATTTC
GAGCCGCTCCTCCGGGCAGATTTCACACTGTTTGATCAATATAAGCACAA
CATTGAAGCTTTCCACAAATTTGACTTCCCCATTCATGGCTACTGCGCCT
CGAAAGACCGCAAAATCTCGAAGAAAATGGTTGAGGGGTGGCGAAACTTT
ACAAGGTCTGATTTTGACATGGAACTTATCCAAGGAAACCATCTCTTTGT
ATACAATGCGGATGCTCGCGACAGCTGGTTCGAAAGCATTACAGATTTGT
TGGTAGCCGAAGGCTTTTGA back to top
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