rna8232, rna8232 (mRNA) Nannochloropsis gaditana

Overview
Namerna8232
Unique Namerna8232
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length699
Alignment locationKK037248.1:139387..142060 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g44.3426.mrna
Orig protein idgnl|cribi|Naga_100011g44.3426
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:139387..142060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100011g44gene7974Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22426.1cds8208Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8232rna8232-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8232 ID=rna8232|Name=rna8232|organism=Nannochloropsis gaditana|type=mRNA|length=699bp
AGCAGTACCTGCACGTCGCGCCCCTATCGCCAATCCGTGCGAGCTCACGA
GATGAAAGGGTGCAGGAACAGTAATTAAACTATGCCTTAGTGGTGACGTT
TTTGGATGCTCAGGCACGCAATTGGACGATTTTTCATGTAACATTCGCGA
ATCCCTGGAAGTCTCCGATAGCGCTCTTCCTTGAAAATGATATAAATATG
GCGCCATCATCACACAGGAAAGTGTCCTACCGAATCGCACGAACTCTTTT
TTCTCAAAAAATGTATTTTTCAATCACATCTCAATTTAATCTCTCCATTT
TTAAAAGTACACATGACTCCTGAAGTCTTATTGCCACCCGAGGAGCCCCG
CTTTGTAGCCGCGGAGGATACGTCGATAAGAGTGGAGTGGGACGCTGTAG
ACACATTACGATACCGCATTCAGTATAAAGAATACCTTCAAAGTTGGGAG
GAGGCGGCGCAGGTAGACGTTCCAAGCGGACAAAATAGAATGGTCGCGGC
GCTTCCTGACTTGCAGCCATGCGCGACGTACTGTGTCCGGCTGGTGGCAG
TTGACGAGGACGGGTTAGAGAGTCCGCCAGGCCCGGAGATCTTCGTCGAT
ACGCAAGCCGCCAACTGCACGCCCAAGCACAAAAAAGCATGTTGTATATG
TTAACACAATAAAAGCAAGAGAAGAAGAATTGCGACGTCGTGACGAATT
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protein sequence of rna8232

>rna8232-protein ID=rna8232-protein|Name=rna8232|organism=Nannochloropsis gaditana|type=polypeptide|length=461bp
MGVRALDLLNPCGTLPALAVTFDKELVDVLLAVSLVEPSLLRGREGGPWR
ALEARRLARLMTGHRAREVLPRLLPDPERHSQGILYLVREQAVLRLVLPW
IRRVEELGDEGGELGFSGSGALAEGRPPERARLQEVHRIGSGANAGGRRS
VGACMVYGASVGSLLLVRRRDAEVEMLNLAILPFMVDEEGDRPEEKDGDE
QGRSVASARQELLSARGRETRERFFNFVPFEAACLPDLERLRRGYERFLH
AVPGARTNELVRLKQDLIQEVVIPLRALQTRMVVRSDEVAVLYERAHAVA
KVLDERLEEQRAACERLLERVAGAEHQLEQDEKVARLAVEKLHWVRSVIT
PQEDRRFQEVQLAEARLRNLHERLESVEGWLGGQKADGGDRTSICARRRR
APEQEMQRRHLISQVQDLGKDVALLESVLDMDEEDAPEEARVGGSALLHD
FNSLRIDYLDT
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mRNA from alignment at KK037248.1:139387..142060-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8232 ID=rna8232|Name=rna8232|organism=Nannochloropsis gaditana|type=mRNA|length=2674bp|location=Sequence derived from alignment at KK037248.1:139387..142060- (Nannochloropsis gaditana)
ACCAAGGCCTAGGGCGGGCGCACCGCTACATGACTATCGTACTTCCTTCA
AACACATCCAGGTCTCGTACGCTAGCATTATAGCATCTTCTGGATCTCTT
GTACGATGCAGGGGACGCGTGTGGCTATCTCGAAGCTAGCCAAGGCGTCA
TCCCTTGGCGGGCTCTCGGCAGAGGCTGGAGAGTCTCTGAACACCTGCGC
CTACAGCGACGCGAAACAGCGTCTGTACTTCTTCGGTCATGGTGTGCAAG
AAGCGACAGAAATGCTGCATTTCTTAACCCTTTCGGATCTAGAGCAGGGT
GTGAGGCCTTTGAGGATAGGAAGCTCTGCAGGAGAGGATGCACAGGACCA
ATTTTACGGTGGAACGCGTGTTACTAACATGATGTTTAACAGTTCTGGCG
ACTTGCTGTTGCTGAGTGGACCTTCAGGTGAGCCAATACCTTATCTCGGT
TTGGTGGATTTGAGGGATGACGCGGAGATAGACTCGCTGTCAGCACGAAG
GGAACCTCCTAGCGCACCGCACAGAAACATCTTACCGGCAGATTTGAGGG
CAAGGTTGCTCAAGGCTGCATGGCATCCGCTCAGTAAGACGCATATCGTA
GCATTGTTCGGGCCCGAAGGCGGATCTGATAGTGGGGAGCGGGCTGAGCT
CCGCATTTATAACGTAGATGACGTGAGACGGATGAAGACGCCCGAAATTA
TTATTCCAGTGGATGGCGACGTGGCATCATTTTGCTTTGGACCAGAGTCG
CTGTGGCAACGCTTTACAATTTATCTGGTGAGTACAGGACTGGAGGCTAC
GGGAGGAGCTCCGCGACTATTCGCGCTTTGCCCTGTGGTGCCCTTCAGAG
CTCGGGTACCGGCGTTGGCGGTGAAGGAGTTGCAAGAGGCGATTTTGGAA
GAGTTAGCACTGGACAAGGTGGCACGGCGACGAGAGGAGCTAGAAACACA
ATGGTCGTTTCTAGATCGCTCCTTTGGCGATGTTGTTGGACTGGCGAAAC
AGCGAGGGGACGACTATCTGGCCTTCAGATGGGTGACAAATCGCGTCCCC
ATGGGCCCCGACCGCACGCCGGTGATCCAGGACGTGGAATGTACGTGGGG
GAGTGGATAGGGATCGTTGGCATAAGGAGATATCGTTATTTTCGCGGGAC
AACCTGCTTGCTGATCTTTCCTTCATCAACCCGTGCCGCTTGACCCCCAC
AGATCCGGACCCCCCCGTGACGACGGCCGAGGGCCTGAGCATGGGCGTGC
GGGCGCTGGACCTGCTCAATCCATGTGGCACTCTTCCGGCGCTGGCCGTG
ACATTTGACAAGGAGCTGGTGGACGTTTTGCTCGCTGTGTCGCTGGTGGA
GCCCTCTCTACTCCGTGGTCGCGAGGGCGGCCCCTGGCGGGCGCTTGAGG
CGCGGCGACTCGCACGTTTGATGACTGGGCACCGTGCGAGGGAGGTTCTG
CCCCGATTACTGCCGGACCCGGAACGTCATTCGCAAGGCATTCTCTACCT
GGTGCGCGAGCAGGCGGTGCTCCGACTCGTCTTGCCGTGGATCCGGCGCG
TTGAGGAGCTGGGGGACGAAGGGGGAGAGCTCGGCTTCTCCGGTAGCGGC
GCTCTAGCTGAAGGACGACCGCCCGAAAGGGCGCGTTTGCAGGAAGTGCA
CAGGATTGGGAGCGGCGCCAACGCAGGTGGCCGAAGAAGCGTGGGGGCGT
GCATGGTGTACGGCGCGTCCGTGGGGAGTCTGCTGCTTGTCCGGCGGCGG
GACGCGGAGGTAGAGATGCTGAATCTTGCCATTCTGCCGTTTATGGTGGA
CGAAGAGGGTGACAGGCCGGAGGAAAAAGATGGGGACGAGCAAGGGCGGT
CCGTCGCGTCCGCAAGACAGGAGCTCCTCTCTGCGCGGGGACGGGAGACA
AGAGAGCGCTTCTTCAACTTCGTTCCTTTCGAGGCGGCTTGCCTACCGGA
CCTCGAGCGGCTGCGGCGAGGATACGAGCGTTTTCTTCACGCAGTACCTG
GTGCACGCACGAACGAACTGGTGAGGCTGAAGCAGGACCTCATTCAGGAG
GTGGTGATCCCCCTTAGGGCCCTCCAGACGCGCATGGTGGTGCGGTCGGA
CGAGGTCGCAGTCCTGTACGAGCGAGCGCATGCGGTGGCCAAGGTGCTTG
ATGAGCGATTGGAGGAGCAGCGGGCAGCATGTGAGCGGCTGCTGGAGAGA
GTGGCGGGGGCCGAGCATCAACTGGAGCAGGACGAGAAGGTGGCTAGATT
GGCGGTTGAGAAGCTCCATTGGGTGCGGTCCGTGATAACACCGCAAGAGG
ATCGAAGATTCCAAGAAGTCCAGCTCGCTGAGGCCAGGTTGCGGAACTTG
CACGAGCGCCTAGAGAGTGTGGAGGGCTGGTTGGGGGGGCAGAAAGCTGA
CGGAGGTGACCGTACGAGTATATGTGCAAGGAGAAGGCGTGCACCAGAGC
AAGAGATGCAACGACGTCATTTGATCAGTCAGGTTCAGGATTTGGGGAAG
GATGTGGCTCTTCTTGAGAGTGTCCTTGACATGGACGAGGAAGACGCCCC
TGAGGAGGCGCGCGTGGGTGGATCCGCCTTGCTACATGATTTCAACAGTC
TACGGATCGACTATTTAGACACCTAGTACAAACAACACGGAAGCCAAAAA
GTGCGAGAGCGCACTCAATTCGTC
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Coding sequence (CDS) from alignment at KK037248.1:139387..142060-

>rna8232 ID=rna8232|Name=rna8232|organism=Nannochloropsis gaditana|type=CDS|length=1386bp|location=Sequence derived from alignment at KK037248.1:139387..142060- (Nannochloropsis gaditana)
ATGGGCGTGCGGGCGCTGGACCTGCTCAATCCATGTGGCACTCTTCCGGC
GCTGGCCGTGACATTTGACAAGGAGCTGGTGGACGTTTTGCTCGCTGTGT
CGCTGGTGGAGCCCTCTCTACTCCGTGGTCGCGAGGGCGGCCCCTGGCGG
GCGCTTGAGGCGCGGCGACTCGCACGTTTGATGACTGGGCACCGTGCGAG
GGAGGTTCTGCCCCGATTACTGCCGGACCCGGAACGTCATTCGCAAGGCA
TTCTCTACCTGGTGCGCGAGCAGGCGGTGCTCCGACTCGTCTTGCCGTGG
ATCCGGCGCGTTGAGGAGCTGGGGGACGAAGGGGGAGAGCTCGGCTTCTC
CGGTAGCGGCGCTCTAGCTGAAGGACGACCGCCCGAAAGGGCGCGTTTGC
AGGAAGTGCACAGGATTGGGAGCGGCGCCAACGCAGGTGGCCGAAGAAGC
GTGGGGGCGTGCATGGTGTACGGCGCGTCCGTGGGGAGTCTGCTGCTTGT
CCGGCGGCGGGACGCGGAGGTAGAGATGCTGAATCTTGCCATTCTGCCGT
TTATGGTGGACGAAGAGGGTGACAGGCCGGAGGAAAAAGATGGGGACGAG
CAAGGGCGGTCCGTCGCGTCCGCAAGACAGGAGCTCCTCTCTGCGCGGGG
ACGGGAGACAAGAGAGCGCTTCTTCAACTTCGTTCCTTTCGAGGCGGCTT
GCCTACCGGACCTCGAGCGGCTGCGGCGAGGATACGAGCGTTTTCTTCAC
GCAGTACCTGGTGCACGCACGAACGAACTGGTGAGGCTGAAGCAGGACCT
CATTCAGGAGGTGGTGATCCCCCTTAGGGCCCTCCAGACGCGCATGGTGG
TGCGGTCGGACGAGGTCGCAGTCCTGTACGAGCGAGCGCATGCGGTGGCC
AAGGTGCTTGATGAGCGATTGGAGGAGCAGCGGGCAGCATGTGAGCGGCT
GCTGGAGAGAGTGGCGGGGGCCGAGCATCAACTGGAGCAGGACGAGAAGG
TGGCTAGATTGGCGGTTGAGAAGCTCCATTGGGTGCGGTCCGTGATAACA
CCGCAAGAGGATCGAAGATTCCAAGAAGTCCAGCTCGCTGAGGCCAGGTT
GCGGAACTTGCACGAGCGCCTAGAGAGTGTGGAGGGCTGGTTGGGGGGGC
AGAAAGCTGACGGAGGTGACCGTACGAGTATATGTGCAAGGAGAAGGCGT
GCACCAGAGCAAGAGATGCAACGACGTCATTTGATCAGTCAGGTTCAGGA
TTTGGGGAAGGATGTGGCTCTTCTTGAGAGTGTCCTTGACATGGACGAGG
AAGACGCCCCTGAGGAGGCGCGCGTGGGTGGATCCGCCTTGCTACATGAT
TTCAACAGTCTACGGATCGACTATTTAGACACCTAG
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Synonyms
Publications