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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100558g1.1626.mrna |
| Orig protein id | gnl|cribi|Naga_100558g1.1626 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:33282..35700 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8180 ID=rna8180|Name=rna8180|organism=Nannochloropsis gaditana|type=mRNA|length=1730bp
CTATGCTGTTTTGGACGTTGAACCGATCCACAAATTGTGCATGCATGGAC
ATTGTGTGCTTCCTACATTTGCGTGTTGTCCGAGATAGACTGCTTTGCGT
GATCGTTGGCATGTCCCTCAACCGGTGCTGGCTCAGAGCGAGGGCACTGT
GTTCGCGAAATACAAGCCAAGACATGCTTTACAACCACCCCGAGCATGGA
AACCTCTTGCACCACAGCCGGTCATGCTCTCGGGACATTCTGAAGCGTGT
GACTTTGTTTTTTTACTGTTTCTTGAGTGCGTGTGATGCGGTAACAGGGC
CTACAGAGAGTTCTTACTCCCTTCGTGAATCACTCACGGGATGTTCGTAG
TTTTTCTGTCTCGTACAAGGCAAGCGCGAAACACGAAGCGATGACAAGTT
TTTTTCTCAGTATCCATTGAAATACCATTTCGTTAGTCCTTTCCAGCGTG
GGATCTAGTCATTCCTGCGCTTACCTCCCTGTGCACCAATATTTCTTACG
TCTCCTTCGACGTACATCCTGGTAAAGGAAAAGAAAATATCATGGCCATC
GAACTTCCCCCCTTGCCTTGGGATAAAAACGCCCTTGCGCCGCACATCTC
CGCGGAGACGATCGACTACCACTACGGGAAGCATCATGCGGCCTATGTCA
CCAAACTAAATGGCATGATTAAGGATGACCCTGCCTACGCAGGCAAGTCT
GTAAAGGAGATCATGCTTGCCGCTCCGGCCGGTGGTCTCTTCAACAACGC
CGCACAGGTATGGAACCACACGTTCTACTGGAACAGCATGGCTCCCAACG
CGGGGGGGGCGCCCTCCGGACCCATCGCCGACAAGATCAACGCCGCCTTC
GGGAGCTTCGACAACTTCAAGTCTCAGTTCTCCACAGCCGCCGCCGGGCA
TTTCGGGAGCGGGTGGGCCTGGCTGGTCCTCAAGGACGGGAAATTGGAGG
TGGTGTCCACGCACGACGCAAGCAATCCGCTGAAGGAAGGCTTGGGGACC
CCCCTCCTGACCTGCGACGTGTGGGAGCACGCTTACTACGTGGACTACCG
GAACGCCCGCCCTGCCTACGTGGAGGCCTGGTGGTCGCTGGTGAACTGGG
AATGGGCCAATGCCCGGCTCGCGGAGGCGTGAGCCGGTGGGTAGGGCCGA
GAGTCGTCCGACCCGACCCCGAAGAATTGGGGCGCTGAGAGCCTCCTGGA
AAGGCAGGGAAGGCGCAGGGGTTGGTCGGGTCAGGGGAGCAGCATGGGGG
TGCCGTCCCGGGTCGCGGGGCGTGGGGGACGTGTTGTGAGGGAGCAGGCG
AGGGGGCGGTTGGGGTAGCCTGGCCGGTGAGGCTAAGGAGGGGGGGAGGC
GGTCGAGGGAGGGTCGTACAGACGGGTAGGAAAGGGTGGATGGAGACCTC
TGGGGAATTGAATGACCGGGCAGGCCGTGCGCCATGAGAATGACAGGAGC
GAGGGCGGGGAGGCGCCAAGGATGGGAAGGGAGGGGGCCCCGAGGGGGGA
GGGAAGAAATAGACCAAGCGGTAGAATTAGAGAGAGGGGCTAGCGATGGA
CAGGGTGGGGCGCAGGGGAAAGAAGGAAAAGCCGACAAGTCCGTCCGAGT
CATTGCCTCCGATCAAGGAGGGGGTCGTTGAAGAGGGTCCCGAATCTTCC
TTTCCCTCCCGCCTCATCACGCAAGGAACGTCTGAGCCTTTTCTCTCGGG
CGCCTGCTCTCCGGCGTTGGGTCTCCTCGA back to topprotein sequence of rna8180 >rna8180-protein ID=rna8180-protein|Name=rna8180|organism=Nannochloropsis gaditana|type=polypeptide|length=470bp
MMRQRSSSSQLCRPLSWGLLVLAVSHSVRVQAFQVPVSRPAAFTRARIPF
HRDTTPFVQKSRSTTFSPSSSSLPVLPHDADKAVGQRGRSFSFSFPLASL
FKPAHRSNKPQKRTASNSLRILLSVLAVVCLTGTVAHALPKQVVSASLTH
PGSSLLSAATASAAPFSILQESLAKTLGQGPLAPVAVLLSWLLDVLEVGA
DLSGALFRLLLWPLLTPLNLLLRHVLLPVLPFSRSLLTSPQGTLLPILTQ
LLHGLGSSLAQLQGGLAAYANGILALLLSTLGIIYQTFCNGLGLFFNLPG
LQFFDGMDPRLQIPSTPIRFVLPSSPSSVPASLPTSSGSTFSLRQMYGRR
WRVHAGKWSWVVPYWERVVMEAQLARYQNTFEKSAIKARFGFPEVVRGPS
PFLGGTLIILTLFYLIYRGHVTSAIWIRQLQKETYGDRAWSPQTRLEEEE
GEGEGEGGGGGRGPGMRKAY back to topmRNA from alignment at KK037248.1:33282..35700+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8180 ID=rna8180|Name=rna8180|organism=Nannochloropsis gaditana|type=mRNA|length=2419bp|location=Sequence derived from alignment at KK037248.1:33282..35700+ (Nannochloropsis gaditana)
CATGCATGCACAATTTGTGGATCGGTTCAACGTCCAAAACAGCATAGTAC
GGGGAGACGCCCCCAAAATAAAGCGATTGTTGCTCTGTAAACAGAATTGG
ACCTCGACTCTCTCTTTGCTTGGTGATTGAACAACCCTAGCCGCAGGTTA
CAAGCTTCAGCCAAGTGCGAGTTTCAGTCCGTGCTACGGCCCCGTGGGCA
CTGTGACTCTCTTCTTCACAGTTGAAGAGTAGTTGTGGTAATGCACGGCT
GCCTGTCCTTATGTATTGCTGGTTTGCTCGGGGTATAAACGGTATCTGAG
CTCCATCAAGCCATTACTTGAGAGCTAGATGACCTTATCCAGGATTTATT
TGCTCGATCAATGACTCAAAATGAGAAATTGCCTCACTCTTTGCTGTCAA
TTATCCCCCTTACAACATTGCAGAGGGCATGATGAGGCAACGGTCCTCAT
CATCACAACTATGCAGGCCACTTTCATGGGGTCTCCTCGTCCTAGCCGTC
TCGCACTCCGTCCGTGTGCAGGCTTTCCAAGTGCCCGTGTCACGGCCTGC
CGCCTTCACGCGGGCGAGAATACCGTTTCACCGTGATACCACGCCCTTTG
TACAGAAAAGCAGGAGCACtactttttctccttcctcttcctcgctaCCG
GTGTTGCCGCATGATGCAGACAAGGCCGTGGGTCAACGCGGAcgttcttt
ttccttctccttcccccttgcctccctcttcaagccCGCACACCGCTCCA
ACAAGCCCCAGAAAAGGACGGCCTCAAATTCTCTGAGAATATTGCTGAGC
GTCCTGGCCGTCGTTTGTCTGACGGGCACCGTGGCCCATGCTCTACCCAA
GCAGGTGGTCTCCGCTTCCCTGACTCACCCTGGAAGCAGTCTCCTCTCCG
CTGCCACGGCCTCGGCAGCCCCATTTTCCATTCTTCAAGAGAGTCTTGCC
AAGACACTTGGCCAGGGGCCCCTGGCCCCCGTTGCCGTCCTGCTCTCCTG
GTTGCTGgacgtgctggaggtgggggcggacCTGAGTGGcgccctcttcc
gcctcctcctctggccCCTCCTAAcccccctcaacctcctcctccgccac
gtcctgctccctgtgctccctttctcccgctcGCTCCTCACTAGCCCCCA
AggtaccctcctccccatcttgaCTCAActcctccatggcctgggctcct
ccctcgcccagctcCAAGGGGGTCTTGCGGCCTACGCCAACGGgatcctc
gccctccttctctctacGCTCGGGATTATTTATCAGACCTTTTGCAACGG
TCTCGGGCTTtttttcaacctccccgGCCTTCAATTTTTCGACGGCATGG
ACCCTCGGCTGCAaattccctccaccccgatCCGctttgtccttccctcc
tccccatcctccgtcccggcctccctccctacctcttcagggtccacctt
ctccctccggcaAATGTACGGCCGCCGCTGGCGCGTCCACGCCGGCAAGT
GGAGCTGGGTGGTCCCGTACTGGGAGCGTGTGGTCATGGAGGCACAGCTC
GCCCGGTACCAAAACACCTTTGAGAAGAGCGCGATCAAAGCCCGCTTCGG
CTTTCCGGAGGTGGTTCGAGGCCCGTCTCCCTTCTTGGGGGGGACCTTGA
TCATATTGACggtgcgagggagggttggaaggaaggaggggggcagtTCT
CAGCTTCAGGCGCATTctcatgcctccctccctcccttcctcgtttcTCG
CGTCCAttttgtcttccctccctccctcgcttcccccctctctccctcct
tggccctttCAGCTCTTCTACCTGATCTACCGGGGACACGTGACCAGCGC
CATATGGATCCGACAGCTGCAGAAGGAGACTTATGGGGACAGGGCGTGGA
GCCCGCAGACccggttggaggaggaagagggggaaggcgagggagaaggg
ggggggggaggacgggggccgGGAATGAGGAAGGCCTATTGAGAGagtag
gaggaaggaggggggaggctggtcctcgtcccctcagtggacgtggagga
ggagggaagcggttGAGACTGTTAAGGTTAGTGTTAGGaagaggagtgga
ggagggggagacgtcGTGTGtcgcggagggcgggcgacacagcggggagg
gagcggggaggttggaggcaCGAACGGTAGGTTCCCTTGCCTGCCGTCCG
GGAGCTCGTTCGGTGTTGTCCTGTGTAGGATGATGCAAAGGGGCTATGGA
GAGATCCAAATTCGATGGAAAAGGCCGAGATGGCTCGGTTAGGGCGGTGT
TTCAGAAGCCGTTTCTGGCGGTGGCACGCCTTGATTGGCATCGAAGGGTG
CAGACATGTCAAGACTTGGAAGCAATTTGTGGCGTGACCGGCGAGTGAAA
GCGCGTGTATGTGCATTCC back to topCoding sequence (CDS) from alignment at KK037248.1:33282..35700+ >rna8180 ID=rna8180|Name=rna8180|organism=Nannochloropsis gaditana|type=CDS|length=2826bp|location=Sequence derived from alignment at KK037248.1:33282..35700+ (Nannochloropsis gaditana)
ATGATGAGGCAACGGTCCTCATCATCACAACTATGCAGGCCACTTTCATG
GGGTCTCCTCGTCCTAGCCGTCTCGCACTCCGTCCGTGTGCAGGCTTTCC
AAGTGCCCGTGTCACGGCCTGCCGCCTTCACGCGGGCGAGAATACCGTTT
CACCGTGATACCACGCCCTTTGTACAGAAAAGCAGGAGCACtactttttc
tccttcctcttcctcgctaCCGGTGTTGCCGCATGATGCAGACAAGGCCG
TGGGTCAACGCGGAcgttctttttccttctccttcccccttgcctccctc
ttcaagccCGCACACCGCTCCAACAAGCCCCAGAAAAGGACGGCCTCAAA
TTCTCTGAGAATATTGCTGAGCGTCCTGGCCGTCGTTTGTCTGACGGGCA
CCGTGGCCCATGCTCTACCCAAGCAGGTGGTCTCCGCTTCCCTGACTCAC
CCTGGAAGCAGTCTCCTCTCCGCTGCCACGGCCTCGGCAGCCCCATTTTC
CATTCTTCAAGAGAGTCTTGCCAAGACACTTGGCCAGGGGCCCCTGGCCC
CCGTTGCCGTCCTGCTCTCCTGGTTGCTGgacgtgctggaggtgggggcg
gacCTGAGTGGcgccctcttccgcctcctcctctggccCCTCCTAAcccc
cctcaacctcctcctccgccacgtcctgctccctgtgctccctttctccc
gctcGCTCCTCACTAGCCCCCAAggtaccctcctccccatcttgaCTCAA
ctcctccatggcctgggctcctccctcgcccagctcCAAGGGGGTCTTGC
GGCCTACGCCAACGGgatcctcgccctccttctctctacGCTCGGGATTA
TTTATCAGACCTTTTGCAACGGTCTCGGGCTTtttttcaacctccccgGC
CTTCAATTTTTCGACGGCATGGACCCTCGGCTGCAaattccctccacccc
gatCCGctttgtccttccctcctccccatcctccgtcccggcctccctcc
ctacctcttcagggtccaccttctccctccggcaAATGTACGGCCGCCGC
TGGCGCGTCCACGCCGGCAAGTGGAGCTGGGTGGTCCCGTACTGGGAGCG
TGTGGTCATGGAGGCACAGCTCGCCCGGTACCAAAACACCTTTGAGAAGA
GCGCGATCAAAGCCCGCTTCGGCTTTCCGGAGGTGGTTCGAGGCCCGTCT
CCCTTCTTGGGGGGGACCTTGATCATATTGACgCTCTTCTACCTGATCTA
CCGGGGACACGTGACCAGCGCCATATGGATCCGACAGCTGCAGAAGGAGA
CTTATGGGGACAGGGCGTGGAGCCCGCAGACccggttggaggaggaagag
ggggaaggcgagggagaagggggggggggaggacgggggccgGGAATGAG
GAAGGCCTATTGAATGATGAGGCAACGGTCCTCATCATCACAACTATGCA
GGCCACTTTCATGGGGTCTCCTCGTCCTAGCCGTCTCGCACTCCGTCCGT
GTGCAGGCTTTCCAAGTGCCCGTGTCACGGCCTGCCGCCTTCACGCGGGC
GAGAATACCGTTTCACCGTGATACCACGCCCTTTGTACAGAAAAGCAGGA
GCACtactttttctccttcctcttcctcgctaCCGGTGTTGCCGCATGAT
GCAGACAAGGCCGTGGGTCAACGCGGAcgttctttttccttctccttccc
ccttgcctccctcttcaagccCGCACACCGCTCCAACAAGCCCCAGAAAA
GGACGGCCTCAAATTCTCTGAGAATATTGCTGAGCGTCCTGGCCGTCGTT
TGTCTGACGGGCACCGTGGCCCATGCTCTACCCAAGCAGGTGGTCTCCGC
TTCCCTGACTCACCCTGGAAGCAGTCTCCTCTCCGCTGCCACGGCCTCGG
CAGCCCCATTTTCCATTCTTCAAGAGAGTCTTGCCAAGACACTTGGCCAG
GGGCCCCTGGCCCCCGTTGCCGTCCTGCTCTCCTGGTTGCTGgacgtgct
ggaggtgggggcggacCTGAGTGGcgccctcttccgcctcctcctctggc
cCCTCCTAAcccccctcaacctcctcctccgccacgtcctgctccctgtg
ctccctttctcccgctcGCTCCTCACTAGCCCCCAAggtaccctcctccc
catcttgaCTCAActcctccatggcctgggctcctccctcgcccagctcC
AAGGGGGTCTTGCGGCCTACGCCAACGGgatcctcgccctccttctctct
acGCTCGGGATTATTTATCAGACCTTTTGCAACGGTCTCGGGCTTttttt
caacctccccgGCCTTCAATTTTTCGACGGCATGGACCCTCGGCTGCAaa
ttccctccaccccgatCCGctttgtccttccctcctccccatcctccgtc
ccggcctccctccctacctcttcagggtccaccttctccctccggcaAAT
GTACGGCCGCCGCTGGCGCGTCCACGCCGGCAAGTGGAGCTGGGTGGTCC
CGTACTGGGAGCGTGTGGTCATGGAGGCACAGCTCGCCCGGTACCAAAAC
ACCTTTGAGAAGAGCGCGATCAAAGCCCGCTTCGGCTTTCCGGAGGTGGT
TCGAGGCCCGTCTCCCTTCTTGGGGGGGACCTTGATCATATTGACgCTCT
TCTACCTGATCTACCGGGGACACGTGACCAGCGCCATATGGATCCGACAG
CTGCAGAAGGAGACTTATGGGGACAGGGCGTGGAGCCCGCAGACccggtt
ggaggaggaagagggggaaggcgagggagaagggggggggggaggacggg
ggccgGGAATGAGGAAGGCCTATTGA back to top
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