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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102136g1.8979.mrna |
| Orig protein id | gnl|cribi|Naga_102136g1.8979 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:508..1411 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8173 ID=rna8173|Name=rna8173|organism=Nannochloropsis gaditana|type=mRNA|length=1501bp
AAGCTTTGTGGACCCCCGCCCAGCAGCCAGCAGCCAGTCTAGCATGTCTC
CCTAGGCCCAGTCTTGTGCGCAGCACCACACTTAATACCACCCACCACCC
GCCCATCCGTACAGGTTTGTCACATCGCACCCTCTACATGGTCCTGGCGT
CTGTGGCTGGCATCGCGGTGGTGGGTGTGCTCTGTGTGTGCCTTCCATGC
ATGATCATCATCAAGCAAGCCTGTTCTTGTCCCCCATCCCCTTTTGGTCT
TGCCCTTTGGCAAGCCAGGGGCACCCGCTTTGCCACCAACCTGTGGTCTA
GCATGCGGAGGGGGAGTGTTTGACGCTGACGGCGTAACGAGCTTGGTTCT
GAAGAGCTTGTTTGTTGTATTTAGGGCGGCTTGGAAACCGACCTCAAACT
CTGTCTCATTCCCCTTCCCTTCCTCCCACCACTACACCACAACAACATGC
ACCGCTTGCATGCTTGCCTTGCTGCTTGCTGCCATCATCAACCACGACCA
CCAGGGGGACAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGG
CACGGAGAGGGAGCACGCTTCCCGGGCCAGGTGAGGTGGCGTGTGTGATG
CATTTTGGAAGAACTCGGGCTTGTTGATGGGGTGGGAGTGCGCGTTCGGT
GCACGCGACCGCAGTCTGGCCGAGGCATGTTGATGCCCCCTTTGTCTGGG
TGTCTGTGTCGTTTGCGTTGCAATCTTTGTTATGCGGACAAGGGCCCGCG
TCAAGGTGTTCACGCACACGCACATGCATACACACCCAACAGGAAAGGGA
CGCGTGCTGCGGGGGGGCTTCTCCTCGACAGCCCACACGGGGCCGGGCAC
AAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACATTTTTCCAAGGCA
TTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACT
TTCGACCAGACTGAGATGGCAACGGAGATCAGGCACATCGAGAGCAAGGC
GGCGGCGGAGATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGGAGGACA
AGTCGGACAATGTATAAAAAGAGAGGAAGAGGAAACAGACGAGCATGACG
ATGATACAGATAAGCACTGTTCCAGAAAAGAAGATGGCTGGGGGAATTAT
GATTTCCAAAGCAAGCAAGACGAAGGGGACAGCGACATAGAAGCAGAGGG
GAAGGAGCTGGAGTTGCTGGTTGATGAGGACGGACGCCTCGTTCTCGACG
GAGGCCATGTCGACTACTCTTTCCGCTCCTTCCTTGCGGCCTTTCCTTCC
TTCCGTACTGATGCTACGTCTTCCTCCGTCCTGTCCACCTTGCTGCACGA
TTGTCGAGTAGCCAGCACGGCAAGGGCGCAGGCCAAGGCTGGGGGAGACT
ACAGCGAAGGCGAGACCTTTTTCATCACCGCCGACACCAAGCCCAAGGTG
CAACTGGAAGCGCTGGCCCTGTCGATATTCCGGGCGCACACCTCTCAAAC
C back to topprotein sequence of rna8173 >rna8173-protein ID=rna8173-protein|Name=rna8173|organism=Nannochloropsis gaditana|type=polypeptide|length=275bp
MMEKVPAEQQRAGHATVAEVLAGVVAEVMREEDGEGGREGGREGWVEWVV
PVVQRVLSKASFDFSQEYVDFLRYLPQRRPLRLLAPVVELLLSEVAASAL
PSFPPSPGASPEGEGRTSDSYTRFAKYLRLLQPLLIESLGYPDLRSEGEE
LGGRLRPFLLRSLPHPYKVCREQVAACLFLLYGYGGMALEGKGGGRDLLE
AMRGMVGEEGKEEGEELAIVTAEVLSLEGGGGKESGKEGGKEGGRVEEGK
GRQKERSHARETFLLWILASTGKKT back to topmRNA from alignment at KK037248.1:508..1411- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8173 ID=rna8173|Name=rna8173|organism=Nannochloropsis gaditana|type=mRNA|length=904bp|location=Sequence derived from alignment at KK037248.1:508..1411- (Nannochloropsis gaditana)
ATGATGGAAAAGGTACCCGCAGAGCAGCAGAGGGCGGGGCACGCTACGGT
CGCGGAGGTTCTGGCGGGCGTGGTCGCCGAAGTGATGAGGGAGGAAGACG
GGGAGGGAGGGAGGGAGGGGGGGAGGGAGGGCTGGGTGGAGTGGGTGGTG
CCGGTAGTGCAGCGGGTGCTGTCCAAGGCCTCCTTCGACTTCAGTCAGGA
GTATGTGGATTTCTTAAGGTATCTGCCACAAAGACGGCCCCTCCGGCTCC
TGGCGCCTGTGGTCGAGCTGCTCTTGTCCGAGGTCGCCGCGTCTGCCCTC
CCCTCCTTCCCGCCCTCCCCCGGGGCTTCCCCCGAGGGGGAGGGAAGGAC
GAGCGATTCCTACACCCGTTTCGCCAAATACCTCCGACTCCTACAACCGC
TCTTGATCGAGTCCCTAGGCTACCCGGATCTTCGGTCCGAGGGCGAGGAG
CTGGGCGGGCGCCTCCGCCCCTTCCTCCTTCGGTCCCTCCCCCACCCGTA
CAAGGTGTGTCGGGAACAGGTGGCGGCTTGTCTCTTCCTCCTCTATGGCT
ACGGAGGGATGGCCTTGGAAGGCAAAGGAGGGGGGCGGGATCTGTTGGAG
GCAATGCGGGGAATGGTGGGTGAGGAAGGGAAGGAGGAAGGGGAAGAGTT
GGCGATAGTCACGGCGGAGGTGCTGTCCCTGGAAGGGGGAGGCGGGAAAG
AGAGCGGGAAGGAGGGCGGGAAGGAGGGCGGGAGGGTGGAGGAGGGAAAA
GGGAGGCAGAAAGAGCGGTCGCACGCGAGAGAGACCTTCCTTCTGTGGAT
CCTGGCATCGGTCCAAGCGGGGGATAAACGGCTGTACAGCCGTTACGTCC
TGCCGTTACTGGACCTGGCCTACGGGTGCGTGCAAGACCGGCAAGAAGAC
GTAG back to topCoding sequence (CDS) from alignment at KK037248.1:508..1411- >rna8173 ID=rna8173|Name=rna8173|organism=Nannochloropsis gaditana|type=CDS|length=1656bp|location=Sequence derived from alignment at KK037248.1:508..1411- (Nannochloropsis gaditana)
ACCGGCAAGAAGACGTAGATGATGGAAAAGGTACCCGCAGAGCAGCAGAG
GGCGGGGCACGCTACGGTCGCGGAGGTTCTGGCGGGCGTGGTCGCCGAAG
TGATGAGGGAGGAAGACGGGGAGGGAGGGAGGGAGGGGGGGAGGGAGGGC
TGGGTGGAGTGGGTGGTGCCGGTAGTGCAGCGGGTGCTGTCCAAGGCCTC
CTTCGACTTCAGTCAGGAGTATGTGGATTTCTTAAGGTATCTGCCACAAA
GACGGCCCCTCCGGCTCCTGGCGCCTGTGGTCGAGCTGCTCTTGTCCGAG
GTCGCCGCGTCTGCCCTCCCCTCCTTCCCGCCCTCCCCCGGGGCTTCCCC
CGAGGGGGAGGGAAGGACGAGCGATTCCTACACCCGTTTCGCCAAATACC
TCCGACTCCTACAACCGCTCTTGATCGAGTCCCTAGGCTACCCGGATCTT
CGGTCCGAGGGCGAGGAGCTGGGCGGGCGCCTCCGCCCCTTCCTCCTTCG
GTCCCTCCCCCACCCGTACAAGGTGTGTCGGGAACAGGTGGCGGCTTGTC
TCTTCCTCCTCTATGGCTACGGAGGGATGGCCTTGGAAGGCAAAGGAGGG
GGGCGGGATCTGTTGGAGGCAATGCGGGGAATGGTGGGTGAGGAAGGGAA
GGAGGAAGGGGAAGAGTTGGCGATAGTCACGGCGGAGGTGCTGTCCCTGG
AAGGGGGAGGCGGGAAAGAGAGCGGGAAGGAGGGCGGGAAGGAGGGCGGG
AGGGTGGAGGAGGGAAAAGGGAGGCAGAAAGAGCGGTCGCACGCGAGAGA
GACCTTCCTTCTGTGGATCCTGGCATCGACCGGCAAGAAGACGTAGATGA
TGGAAAAGGTACCCGCAGAGCAGCAGAGGGCGGGGCACGCTACGGTCGCG
GAGGTTCTGGCGGGCGTGGTCGCCGAAGTGATGAGGGAGGAAGACGGGGA
GGGAGGGAGGGAGGGGGGGAGGGAGGGCTGGGTGGAGTGGGTGGTGCCGG
TAGTGCAGCGGGTGCTGTCCAAGGCCTCCTTCGACTTCAGTCAGGAGTAT
GTGGATTTCTTAAGGTATCTGCCACAAAGACGGCCCCTCCGGCTCCTGGC
GCCTGTGGTCGAGCTGCTCTTGTCCGAGGTCGCCGCGTCTGCCCTCCCCT
CCTTCCCGCCCTCCCCCGGGGCTTCCCCCGAGGGGGAGGGAAGGACGAGC
GATTCCTACACCCGTTTCGCCAAATACCTCCGACTCCTACAACCGCTCTT
GATCGAGTCCCTAGGCTACCCGGATCTTCGGTCCGAGGGCGAGGAGCTGG
GCGGGCGCCTCCGCCCCTTCCTCCTTCGGTCCCTCCCCCACCCGTACAAG
GTGTGTCGGGAACAGGTGGCGGCTTGTCTCTTCCTCCTCTATGGCTACGG
AGGGATGGCCTTGGAAGGCAAAGGAGGGGGGCGGGATCTGTTGGAGGCAA
TGCGGGGAATGGTGGGTGAGGAAGGGAAGGAGGAAGGGGAAGAGTTGGCG
ATAGTCACGGCGGAGGTGCTGTCCCTGGAAGGGGGAGGCGGGAAAGAGAG
CGGGAAGGAGGGCGGGAAGGAGGGCGGGAGGGTGGAGGAGGGAAAAGGGA
GGCAGAAAGAGCGGTCGCACGCGAGAGAGACCTTCCTTCTGTGGATCCTG
GCATCG back to top
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