rna8150, rna8150 (mRNA) Nannochloropsis gaditana

Overview
Namerna8150
Unique Namerna8150
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length945
Alignment locationKK037247.1:695303..697517 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100378g1.10077.mrna
Orig protein idgnl|cribi|Naga_100378g1.10077
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:695303..697517 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100378g1gene7894Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22549.1cds8126Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8150rna8150-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8150 ID=rna8150|Name=rna8150|organism=Nannochloropsis gaditana|type=mRNA|length=945bp
TTTCAGGCTAAAGTAATCATTTTCATGAGTAACAAAATGCTTATCAACTT
GCCTGTGCGAGACCCGTCCAGCTTCTCGCGGATGCATATCAGAGGGAAGC
CTGCGGTACAAGTCCCGCGTGAGCTTATTCCCACCAACGACACCAATGCC
ATGCAGGTACGCGAGACAAAACTATCCCTTGTGCTTAAAATTTGCCATAA
GCGCAGTTCTTAATCTGGTAGATTTGTGTTACTGTCTTGCGACGCTATAA
TGCAAAGATGAGTTTCTTGATCTTGATACACGACGCTTAATGTGTTGAAT
TTGGACAACATTACCCTTTACGTAATATATGTTCATCGTCATAGCATAGC
AAACGAAATGGCATGCGATGCGTGAAAGTTGAAAAAATTATTGGATCAAG
ATTCATTTCAAGTATTTCCGGCAACCCTCTTGCAATCATGCCACACTATA
GCCCACCCCTAATAGAGCAGGCGAGCCCTGGATGTTAGGCCTGGGTTCTC
CCGCTGCCAGCATCTCTCCAATTCCTGCCTCAATTATCTCGCCCGGCTAT
CCACAAGCCTCTTCCTCCAAAGCACTTGCATCGAGTGGTTCGTCATTAGC
GAAGAACTCCAGGATAAGCGCGGACGCTGATATTTCAATAGGAACAAAAG
ATGGAGGAACTGATTTGACACCACCCGTAGCATCCATGACAAATGGACAA
ATGGTGGAATGCGGCGATTTTTTAAATCAATCGAACTTGTCGTCAAATAA
ACGACATGCGCCTGACAATTCAATAGAAGCATGCGATGGTACTGAGGTTG
AAGGATCACCAAAAGCGAAAAAGGTGATTCGCTTGAGTTAGGACAATTTA
AGAGGATAAAAAGAAAGGGCGAATAAAACAGTACAATGCGTTATATGACC
TTGCTCGTCTCAAATGGCGACCACCAGAAGAAATCCTGTTCGATC
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protein sequence of rna8150

>rna8150-protein ID=rna8150-protein|Name=rna8150|organism=Nannochloropsis gaditana|type=polypeptide|length=361bp
MVHVEPRTERAVEEHEPPRMAPGHFRGRDHGLGGYQDRWVLAHPPEAHRR
ERGGARRGRAGLAPAGRRGGRDRGRDGGQGEEETSDGKPDETHSLPRDLV
LRRRSGQGEDPAGSLGGREEGREAGKAGGESACDGAAHLGAGYAREGGRC
GREEGKEEGREGGREGGREGGRKGERLALRLGERDGRRGRKGMCASLWFF
LPSPGPSTATSSSPSSVPSIVSSGAGVVAFPSFIDFSSSSSSSSSSSISV
SSSPPSSSSFSSSSFLSPQSIFCLPCCSSPPSPSKSRTLPTPFLFSLPPS
SLSAPSCRAWRREDVLKTKCQETEGQNRQNFLSKARRHENGRRKTKVFEG
GEGRRAAKQHS
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mRNA from alignment at KK037247.1:695303..697517-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8150 ID=rna8150|Name=rna8150|organism=Nannochloropsis gaditana|type=mRNA|length=2215bp|location=Sequence derived from alignment at KK037247.1:695303..697517- (Nannochloropsis gaditana)
GGGGGCCCCATGCCGGCGGACGAGGATGACTACGACAACCGGGGCGGGGG
CGGGAGGATGCGGTACGAAGCGACCTCCAACACCACCGTGGCCCCTGCCG
CTGTCTCCAGCGCCGCGCAGCCCCCCGCCTTGACCTCGGTCGAAGCCGCC
GCCGTCTACAAAGTCCGGGTACCGAGTTATACGGATCGGATCTGGCTCCA
CTCCCTCCCCGACGTGGCGAACGCCTTGTCCTTCCAATCCTACGAGTTGT
GCGATGCCTTGTGGGAAAGCGACCACCGGCCCGTCTCCGCCGTCCTCCAC
CTCGACCTCCGCCCCGCCCTCAACTTGCACCGCGCTTACCTCCAGGCGTA
CACGCCCCGCGCCCCTCTCTTACCCCTCCCTCCCCGGTCCCCGACGGCCA
TGATGAAGAATAAGGTCTCCTCCTTCTTCAACGGGACCAGCCACACGGGG
GGAATCGGCGGGAGCGACATGGTCAAGAAAGGCTTGCGGAGGAGCGAGGG
CAGCCAAGGAGGGAACCGGTCCACGCCCTCGAACCGGAGACTGGACGTGG
AAACAGCGGCCGCAGCGGCGGTAAAGGCCATCGCTGGCTACCCTACCACC
CAGCCATCCACCCCGTCCTCCGCGCCAGCCCTTCTCCAGCCGGCGCCAGC
CCAGGCCGGGGAGGGAGGGCACCCGGGGGTCCGGCATGGGCGGGGGCGGC
TTTTAAGCTCCCCTACACGCAGCGGAAAGTCGGGCGGTTGGCCGTGCTGT
TCCCCTTGCCCAGCGAGAACCAACTCGAGCATACGCACCGGACCTTGGAG
TACTTGGACGCGACCATCTGCCACGAATGGTCCACGTGGAGCCGAGAACG
GAAAGGGCTGTTGAAGAGCACGAGCCACCACGAATGGCGCCAGGCCACTT
CCGAGGAAGGGATCATGGTCTCGGCGGCTATCAAGATAGGTGGGTCCTTG
CACACCCTCCTGAAGCTCATCGACGTGAACGGGGGGGAGCTCGCCGAGGC
CGTGCTGGCCTTGCCCCGGCCGGGAGGAGGGGGGGGAGGGACCGGGGGAG
GGATGGGGGGCAAGGGGAGGAAGAAACGAGTGACGGCAAGCCTGACGAAA
CACACAGCTTACCGAGGGACCTTGTGCTGCGACGTCGAAGTGGTCAAGGT
GAAGATCCAGCGGGAAGCCTCGGAGGGAGGGAAGAAGGGAGGGAAGCGGG
GAAAGCGGGAGGAGAGTCTGCCTGCGACGGTGCCGCCCACCTCGGGGCCG
GGTACGCCCGTGAGGGAGGAAGGTGTGGCCGGGAAGAAGGGAAGGAAGAA
GGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGCGAAAAGGGGA
GCGGCTCGCGCTTCGACTGGGAGAGCGGGATGGTCGTCGAGGACGAAAAG
GCATGTGCGCCTCCCTCTGGTTTTTCCTCCCCTCCCCCGGTCCCTCTACC
GCTACCTCCTCCTCCCCTTCCTCCGTGCCCTCCATCGTCTCGAGTGGAGC
AGGTGTCGTCGCTTTCCCCTCCTTCATCGACTTCAGCTCCTCTTCCTCCT
CTTCCTCCTCCTCCTCCATCTCTGTCTCCTCTTCCCCCCCCTCTTCCTCC
TCCTTCTCCTCCTCCTCCTTTCTCTCACCCCAGTCCATCTTCTGCCTTCC
CTGCTGCTCTTCCCCCCCCTCGCCCTCCAAGTCCCGCACCCTTCCAACCC
CTTTCCTCTTCTCCCTCCCGCCCTCCTCCCTCTCCGCCCCCTCCTGCAGA
GCATGGAGGAGGGAAGACGTACTAAAAACAAAATGTCAGGAGACAGAAGG
GCAGAATCGACAAAATTTCCTTTCAAAGGCGCGGCGGCATGAAAACGGAA
GGCGAAAGACGAAGGTGTTTGAGGGAGGCGAAGGCAGGAGGGCTGCGAAA
CAACATAGTTAAAAGTAGGAACTTAAAGGAGTGGAGTGAAAAAGTAGGAT
TGTTCGGAAAAGAAGAAGGGATTATAAGAATCGAAGAGGAGTCGCTCCAT
CTGTTCTAAGGGACGGAAAGGGGAATAAATATCACCGACAGCTGCTCACT
CTTACTAAAGAATATACATACTTGTAAAGTGCACTCCTGTGGGCATGGCT
GATATTGCTGGAACGCAAGAAATTGATATTAAAGGTATTTTTCTTTAAGG
ATAAATGTAACAAGACGTCAGCATTAAAGATTCACGGCGAGGAGAGTAAT
GGCAAAAGCTACAAC
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Coding sequence (CDS) from alignment at KK037247.1:695303..697517-

>rna8150 ID=rna8150|Name=rna8150|organism=Nannochloropsis gaditana|type=CDS|length=1086bp|location=Sequence derived from alignment at KK037247.1:695303..697517- (Nannochloropsis gaditana)
ATGGTCCACGTGGAGCCGAGAACGGAAAGGGCTGTTGAAGAGCACGAGCC
ACCACGAATGGCGCCAGGCCACTTCCGAGGAAGGGATCATGGTCTCGGCG
GCTATCAAGATAGGTGGGTCCTTGCACACCCTCCTGAAGCTCATCGACGT
GAACGGGGGGGAGCTCGCCGAGGCCGTGCTGGCCTTGCCCCGGCCGGGAG
GAGGGGGGGGAGGGACCGGGGGAGGGATGGGGGGCAAGGGGAGGAAGAAA
CGAGTGACGGCAAGCCTGACGAAACACACAGCTTACCGAGGGACCTTGTG
CTGCGACGTCGAAGTGGTCAAGGTGAAGATCCAGCGGGAAGCCTCGGAGG
GAGGGAAGAAGGGAGGGAAGCGGGGAAAGCGGGAGGAGAGTCTGCCTGCG
ACGGTGCCGCCCACCTCGGGGCCGGGTACGCCCGTGAGGGAGGAAGGTGT
GGCCGGGAAGAAGGGAAGGAAGAAGGGAGGGAAGGAGGGAGGGAAGGAGG
GAGGGAAGGAGGGCGAAAAGGGGAGCGGCTCGCGCTTCGACTGGGAGAGC
GGGATGGTCGTCGAGGACGAAAAGGCATGTGCGCCTCCCTCTGGTTTTTC
CTCCCCTCCCCCGGTCCCTCTACCGCTACCTCCTCCTCCCCTTCCTCCGT
GCCCTCCATCGTCTCGAGTGGAGCAGGTGTCGTCGCTTTCCCCTCCTTCA
TCGACTTCAGCTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCATCTCTGTC
TCCTCTTCCCCCCCCTCTTCCTCCTCCTTCTCCTCCTCCTCCTTTCTCTC
ACCCCAGTCCATCTTCTGCCTTCCCTGCTGCTCTTCCCCCCCCTCGCCCT
CCAAGTCCCGCACCCTTCCAACCCCTTTCCTCTTCTCCCTCCCGCCCTCC
TCCCTCTCCGCCCCCTCCTGCAGAGCATGGAGGAGGGAAGACGTACTAAA
AACAAAATGTCAGGAGACAGAAGGGCAGAATCGACAAAATTTCCTTTCAA
AGGCGCGGCGGCATGAAAACGGAAGGCGAAAGACGAAGGTGTTTGAGGGA
GGCGAAGGCAGGAGGGCTGCGAAACAACATAGTTAA
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Synonyms
Publications