rna8131, rna8131 (mRNA) Nannochloropsis gaditana

Overview
Namerna8131
Unique Namerna8131
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length636
Alignment locationKK037247.1:643082..644155 -

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Properties
Property NameValue
Productfructokinase
Orig transcript idgnl|cribi|Naga_100529g1.9584.mrna
Orig protein idgnl|cribi|Naga_100529g1.9584
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:643082..644155 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100529g1gene7874Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8131rna8131-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22566.1cds8107Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8131 ID=rna8131|Name=rna8131|organism=Nannochloropsis gaditana|type=mRNA|length=636bp
AGGCGTCTTGAACCGGACCATCCTGTACCCGAAAATCCGGGCCAAGACCC
TGGAGATCCTCAAGGGCTACATCGTCCACCCCCTCCTGACGCCGGCCCAT
ATCCACGACTACATCACCCCCTCCGAGTGGGGGGACAACGCCGGCATCGT
GGGCGCGCTCACTTTGGCGCAAGTCGCCTTGGAGGAGAAAGGGAAAGCCA
CCCTCGCCTACAAAATCTGGCAATGGGTGGACACGAACAAGGGGGGGCTG
GTAACGGGTGTGGTGGCGGGGGCAGCGGCGGCGGCTGTGGCCGTGATGGG
GAGGAGGAAGTAGGGAGGAAGGAAGGGAGGAAGGGAGGAAGGGAGGGGCA
GGGAGAGTACCAACCTAGGCGGGACGTTCGGGGGTGGCCCAGTGGGCTCG
TGTGGAGAATCTTCGATGGACGACGTGAGGGGGGCCGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGA
GGGAGGGAGGAGGTGAAGGAGAAGGAGGGTTAGGGAAAGGGGGGGGGAAA
GACTTTTTGAAGGGTCCAAGGGGTCTCCCAGGCGGCGCCAGGCAGGCACC
GGCGTGGAATCTGCGTGTCGAATGGGAGGAAAGTGG
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protein sequence of rna8131

>rna8131-protein ID=rna8131-protein|Name=rna8131|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MPTYLGIEGGGTTWKVAIAQEKPDNIVESIRFDTTTPDETFGKIKEWIKD
KTYDSIGIATFGPLDPKLSSPTYGHITSTPKPGWKNVDVVGALTDGSKPV
LFDTDVNAPALAEYTYHRPSMASSTLRAATSRPSVSLRTG
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mRNA from alignment at KK037247.1:643082..644155-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8131 ID=rna8131|Name=rna8131|organism=Nannochloropsis gaditana|type=mRNA|length=1074bp|location=Sequence derived from alignment at KK037247.1:643082..644155- (Nannochloropsis gaditana)
ATGCCGACATACTTGGGTATTGAAGGCGGAGGGACGACGTGGAAGGTACG CGTTCGCCTATTTCTACTTCCCTTTCGTTTGCGTTCGTCTGATGTTCTTT TGCCTGCTTTGACTGTCCTTAGGGGTTCAATTCACCTCACGTCTCATTCC ATCACAAATGTAGGTGGCCATAGCACAAGAAAAGCCTGACAACATCGTAG AGTCCATCCGTTTTGATACCACCACCCCCGACGAGACCTTTGGGAAGATC AAGGTAGAGTATCATGTTCCATCGCTCGACCTTTCTGGCCCTACTTTAGC TCCGTCCCTCGCATTTTCTTCCCTTTCTTCCATCCTGACTCTTCCGTCCA ATTTCCTGAACCTTCTTAATTACTGATGAAAACATATGTGACATTCGCCG TGTTGCAAGGTTATAGCGGTCGTCCCTCTCCCTTTCCTCTTGTCTGCATG CTCCCTAACCCTCACCCTGTCCACACTCCCAGGAATGGATCAAGGACAAG ACCTACGACTCAATCGGCATCGCCACCTTCGGCCCCTTGGACCCCAAACT TTCCTCGCCCACGTATGGACACATCACCTCCACTCCCAAGCCCGGCTGGA AGAATGTAGATGTCGTCGGCGCCTTGACTGGTACGTCCGCCTTCCCTTCC TCCCTCGCTCTCTCCCTTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC CCTCCCTCCCTCCCTCCCTTCTTCCCTTTTATTTCCGCCCTTCCTCCGCT GCCATCCCTGCGATTGCGCCTCCCCATCCCTGCGAAACCACCAACGCCTC CCTTCCCCCCCCTCCCTCCCCCCCTCCTTCCCTCCCCCCCCGGCCCCTCC CTCAGACGGGAGCAAGCCCGTCCTCTTCGACACGGACGTGAACGCCCCCG CCCTCGCCGAATACACCTACCACCGGTCCTCCCCCACCCAGACCTCGGTC GCCTACATCACGGTGGGCACCGGCGTGGGGGTCGGCTTGGTCGTCAACGG GAAGACCGTCCATGGCCTCGTCCACCCTGAGGGCGGCCACGTCGCGCCCT TCCGTCTCCCTGCGGACGGGCTGA
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Coding sequence (CDS) from alignment at KK037247.1:643082..644155-

>rna8131 ID=rna8131|Name=rna8131|organism=Nannochloropsis gaditana|type=CDS|length=2115bp|location=Sequence derived from alignment at KK037247.1:643082..644155- (Nannochloropsis gaditana)
ACCGTCCATGGCCTCGTCCACCCTGAGGGCGGCCACGTCGCGCCCTTCCG
TCTCCCTGCGGACGGGCTGAACGGGAGCAAGCCCGTCCTCTTCGACACGG
ACGTGAACGCCCCCGCCCTCGCCGAATACACCTACCACCGGAATGGATCA
AGGACAAGACCTACGACTCAATCGGCATCGCCACCTTCGGCCCCTTGGAC
CCCAAACTTTCCTCGCCCACGTATGGACACATCACCTCCACTCCCAAGCC
CGGCTGGAAGAATGTAGATGTCGTCGGCGCCTTGACTGGTGGCCATAGCA
CAAGAAAAGCCTGACAACATCGTAGAGTCCATCCGTTTTGATACCACCAC
CCCCGACGAGACCTTTGGGAAGATCAAGATGCCGACATACTTGGGTATTG
AAGGCGGAGGGACGACGTGGAAGACCGTCCATGGCCTCGTCCACCCTGAG
GGCGGCCACGTCGCGCCCTTCCGTCTCCCTGCGGACGGGCTGAACGGGAG
CAAGCCCGTCCTCTTCGACACGGACGTGAACGCCCCCGCCCTCGCCGAAT
ACACCTACCACCGGAATGGATCAAGGACAAGACCTACGACTCAATCGGCA
TCGCCACCTTCGGCCCCTTGGACCCCAAACTTTCCTCGCCCACGTATGGA
CACATCACCTCCACTCCCAAGCCCGGCTGGAAGAATGTAGATGTCGTCGG
CGCCTTGACTGGTGGCCATAGCACAAGAAAAGCCTGACAACATCGTAGAG
TCCATCCGTTTTGATACCACCACCCCCGACGAGACCTTTGGGAAGATCAA
GATGCCGACATACTTGGGTATTGAAGGCGGAGGGACGACGTGGAAGACCG
TCCATGGCCTCGTCCACCCTGAGGGCGGCCACGTCGCGCCCTTCCGTCTC
CCTGCGGACGGGCTGAACGGGAGCAAGCCCGTCCTCTTCGACACGGACGT
GAACGCCCCCGCCCTCGCCGAATACACCTACCACCGGAATGGATCAAGGA
CAAGACCTACGACTCAATCGGCATCGCCACCTTCGGCCCCTTGGACCCCA
AACTTTCCTCGCCCACGTATGGACACATCACCTCCACTCCCAAGCCCGGC
TGGAAGAATGTAGATGTCGTCGGCGCCTTGACTGGTGGCCATAGCACAAG
AAAAGCCTGACAACATCGTAGAGTCCATCCGTTTTGATACCACCACCCCC
GACGAGACCTTTGGGAAGATCAAGATGCCGACATACTTGGGTATTGAAGG
CGGAGGGACGACGTGGAAGACCGTCCATGGCCTCGTCCACCCTGAGGGCG
GCCACGTCGCGCCCTTCCGTCTCCCTGCGGACGGGCTGAACGGGAGCAAG
CCCGTCCTCTTCGACACGGACGTGAACGCCCCCGCCCTCGCCGAATACAC
CTACCACCGGAATGGATCAAGGACAAGACCTACGACTCAATCGGCATCGC
CACCTTCGGCCCCTTGGACCCCAAACTTTCCTCGCCCACGTATGGACACA
TCACCTCCACTCCCAAGCCCGGCTGGAAGAATGTAGATGTCGTCGGCGCC
TTGACTGGTGGCCATAGCACAAGAAAAGCCTGACAACATCGTAGAGTCCA
TCCGTTTTGATACCACCACCCCCGACGAGACCTTTGGGAAGATCAAGATG
CCGACATACTTGGGTATTGAAGGCGGAGGGACGACGTGGAAGACCGTCCA
TGGCCTCGTCCACCCTGAGGGCGGCCACGTCGCGCCCTTCCGTCTCCCTG
CGGACGGGCTGAACGGGAGCAAGCCCGTCCTCTTCGACACGGACGTGAAC
GCCCCCGCCCTCGCCGAATACACCTACCACCGGAATGGATCAAGGACAAG
ACCTACGACTCAATCGGCATCGCCACCTTCGGCCCCTTGGACCCCAAACT
TTCCTCGCCCACGTATGGACACATCACCTCCACTCCCAAGCCCGGCTGGA
AGAATGTAGATGTCGTCGGCGCCTTGACTGGTGGCCATAGCACAAGAAAA
GCCTGACAACATCGTAGAGTCCATCCGTTTTGATACCACCACCCCCGACG
AGACCTTTGGGAAGATCAAGATGCCGACATACTTGGGTATTGAAGGCGGA
GGGACGACGTGGAAG
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Synonyms
Publications