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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100893g1.3195.mrna |
| Orig protein id | gnl|cribi|Naga_100893g1.3195 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:628323..629233 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8121 ID=rna8121|Name=rna8121|organism=Nannochloropsis gaditana|type=mRNA|length=2661bp
ATAAATCCATGACTTATCAAGTGATACATACTATACGCAGGTCTCAATAC
ATCGACCCTTCTCGTGGGAAAGCAGCGGTGTCTGATGCGGGCTTGGTATC
TGAATGATCCCCACCAGGCATGCACGCCTGCGATTTTGGAGGAATTGGGC
GCTTGTGTGGGAAAAGCTTTCGAACCAGATAAAGGGTCAGATACGTTATT
TTTAACCGCCATCAGTGAAAAGGAACTGGGAGCGGCATTCGCAGACACAC
TCAAGGAGTTTGGGCGCGAGCACTGCATGGGCGCAGTAAGTGAAGTGCAA
GACTTTAATGTCGTTGGCGGACAAGTGTACATAGATGTTCGGGACAGCGC
GGATGCCTGGATCCGGGTACTCTTGTTTAAAGAGGACCGGCTCACATTGC
CCAGTTCGGTATGGCGTCGCCTAGTCCCAACCACAGAGGACATCCACGTA
GACGTGGCCATCGCTTCCAGGCCCGATCCGAGCAATGGCGTGAGTAAGGC
CGCCAGCAACGGTGCGGGTAGGAAGGGGGGGTCGGCGTTCTCCGTGAAGA
CCTACCGGTTCGCATCTCCGGCGGACGAGCGGCGGGCCATGGCCGTGTGG
ACGCAACGGAGGGGGCAAGACGGGGGCACCCGGCAGCTGATTGTGGACCT
GTGTCGACAGTTCTATGACCTGGGCTGGGTGACGGGCACGGGGGGAAGCA
TCAGCATTCGGGAGGGGAACCGGGTCTTTATGACGCCGTCCGGGGTGCAG
AAGGAGCGGATCCTGCCCGAGGAGCTTTACATCCTAGACATGCGCGGGAA
CCACTTGTACGTCCCCCCGGAGTCCCAGCCCGGTCGCAGTCCTTTGAAGC
TGACGGCCTGCGCGCCCCTCTTTTTCCACACCTATCGAATCCGCGACGCC
GGTGCTGTCATCCACTCGCACGGGATGGACTGCGTGCTCGCCACCTTGCT
GCAAGGAGAGGATGCGACCGAGTTTCAGATCACGCATCAGGAGATGATTA
AAGGTATCGCCGGACACGGTTACCGCTCGACCCTGGTCATTCCCATCATC
GAGAACACACCGCACGAGGCAGACCTGGCCGATTCCTTGGCGGATGCGAT
CCGACGATACCCGGAGACAACAGCTGTGTTGGTCCGACGCCACGGCATTT
ACATCTGGGGGAAGACATGGATGCAGGCCAAGACTCAGGCGGAATGCTAC
CACTACCTGTTCAGGCTGGCGGTGGAGATGCACCGTCTCGGCATTGACTA
CACGGCCACCCCAAGAGGCGATGGAGCCACCCTATCGCCCGCGATGCTGA
CGAAGGAGAAAGAAGCCTTGCTGGCAAGGGGGGAGGGAATGGGGTGCTGC
AGTGGTGCGGGGGGAGGGGAATTGCAGGGGTCCCACGCCCTGAACGGTTC
GCATGAGAATGCTGGGCGGTACGAGAAGAGCGGAATCAAGCACGTGCTGA
TGGATATCGAAGGAACGACCACCTCCATCGACTTCGTACACCAGGTTTTG
TTTCCGTACGCCTCGGCCCAGGTGGGCGCGCATGTCCGGGAGAAACTCGC
GGAAAACGACCCGGAGGTACTCGGGGACATCCAGGCCTTGAGGGACGGCT
GTCCGGAAGGTTGCCCCCCTATACCGGAGGAGGGAGGAGAGGGAGGGAGG
GAAGGCTTGATGGAGGCAGTGGTCAAGAATGTGCGATGGCAGATGGAACG
TGACCTGAAAACGACGGCCTTGAAACGCTTGCAGGGACACATTTGGCGGG
CTGGGTATGCAAAAGGAGCGCTGCACTCGCACGTGTACGAAGACGTGCCG
GGTGCCTTGGCAAGATGGACGCAAGGGGGGAAGGGAGGGTGGGGGGCGTG
AAACTAGCCATCTATTCGAGCGGTTCCCGCGAAGCGCAACGGCTTTTGTT
TGAACACACCGAGGCAGCGGGTGATCTCAGGAGGTACTTGAACTGTTATT
TCGACACCAGCGTGGGAGGAAAACGGGAGGTGGAGAGTTACCGGCAGATT
GCCTCGTCATTGGGGGTGTCGGGATTGTACGAGGTATTATTTTTAACGGA
CGTGGTGGAGGAAGGCCTGGCCGCGAGGGAGGCGGGGATGCGGGTCTTGC
TGAGCGTGAGGCCAGGAAATGCCGAGGTCGACGAAGAGAAAGGGAAAGGC
TTTGTGAAAGTGACCTCCTTTGAGGAGGTGGATGCTTTCTTGGAGGGGCG
GGTCTCGTTTCCTATCTAACTCCTTGAGGAGGTTTGGTGCCTTGGGTAGA
CCTGCTGCCTGTGAGAGGGACGCGGAAGAGAGGAGTGGAGGAGAAGGAGA
GGAGGCGATGCAAGGCGCGGTGGAGAGGGAAGGTAATGAGGCAGAGGTTG
AGATGTTTGCCGCTTTGTCTTGTCGAGGAGGCAAGCTGCGTGATTGCGGG
GTCAGGGGGGGTGATGATGATGGTGGGCATGCCACGCAGAGAGGTGCAGT
GCTGGCCTAGTGACCATAACAGGTCATCTCCTTGATGCGCAGGGATTCGA
CTCCAAGGGCTTGATGGCTGTAGCACATATCAAGTGGGATCTTGTGGAAA
AAAGGCAAGGATAAGCTGAAGGTTTTGGCATGTTCTACCACTAATGTTCG
TTGCATTTCTTTTTCGTTTTTTTGGTAGCGCTTTGGTTCCCTTTGAGCCC
CGACGCTTTGT back to topprotein sequence of rna8121 >rna8121-protein ID=rna8121-protein|Name=rna8121|organism=Nannochloropsis gaditana|type=polypeptide|length=173bp
KKKKKGGREAEEEGKEGPLHAGGGGGKNGSKAPEEREIGEEEGRGEREGI
NMEGSAEWNGEETGQGEEEALSGVREIPGGEEEEEIGRLSGPDAAASVPS
PVAVARARELHVAILSLEERVGQAADEEDYEAAGALQEELEGLREEMAAL
GPIDVVHLIMDSSEEEKEEEVGG back to topmRNA from alignment at KK037247.1:628323..629233+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8121 ID=rna8121|Name=rna8121|organism=Nannochloropsis gaditana|type=mRNA|length=911bp|location=Sequence derived from alignment at KK037247.1:628323..629233+ (Nannochloropsis gaditana)
aagaagaagaagaaggggggtagggaggcggaggaggagggaaaagaagg
gccGCTtcatgcgggaggaggaggagggaagaacggTAGCAAAGCTcctg
aggagagagagataggtgaggaggagggcaggggtgaaagagaaggcatC
AATATGGAAGGGAGCGCGGAGTGGAACGGCGAAGAGACGggtcaagggga
ggaggaggctctaTCGGGTGTTAGGGAGataccggggggggaggaagagg
aggagataggaAGGTTGTCGGGCCCCGACGCCGCGGCCtccgttccttct
cccgtgGCGGTTGCGAGGGCTCGGGAGCTGCATGTGGCGATTTTGTCCTT
GGAAGAGCGGGTGGGCCAGGCAgccgacgaggaagactacgaggcggcgg
gggcgctgcaagaggaattggagggtttgcgggaggagatggcggccTTG
GGTCCAATTGATGTGGTGCATTTGATCATGGACTCTtcggaagaggagaa
ggaggaggaggtggggggatgacgggagggaaaggaggagggaggagggg
aaaggcgcatcggggggaggaagcgaacaAAAGGATTACGTCGTGGAGCT
GCGCAAGCGAGGAATTAAACAGTTTACGTGGCTATGACCACGCATGTGCA
AAGTAATATGAACGTCAAATCAGTCCAGCGAACGGGTAAATTGAAAACAA
AAAGTAAGAAATGCTTTCGGTGTGCTGATGACAGGAAGATCAGGGGGGCC
GCGGGGCAGCAATGCATTGGGTTTCCGGCATTGAAAGACCTCACAGGCCA
AATCCAGCCTTCAATCAAGTTTTAAGAGTTTTATGGCCTAATTAAATTCG
CATTGAGTGGTTTCAAATACCTAATTCGTGTGCAATCATCCTCGCAAACA
GGCACGAAAGC back to topCoding sequence (CDS) from alignment at KK037247.1:628323..629233+ >rna8121 ID=rna8121|Name=rna8121|organism=Nannochloropsis gaditana|type=CDS|length=522bp|location=Sequence derived from alignment at KK037247.1:628323..629233+ (Nannochloropsis gaditana)
aagaagaagaagaaggggggtagggaggcggaggaggagggaaaagaagg
gccGCTtcatgcgggaggaggaggagggaagaacggTAGCAAAGCTcctg
aggagagagagataggtgaggaggagggcaggggtgaaagagaaggcatC
AATATGGAAGGGAGCGCGGAGTGGAACGGCGAAGAGACGggtcaagggga
ggaggaggctctaTCGGGTGTTAGGGAGataccggggggggaggaagagg
aggagataggaAGGTTGTCGGGCCCCGACGCCGCGGCCtccgttccttct
cccgtgGCGGTTGCGAGGGCTCGGGAGCTGCATGTGGCGATTTTGTCCTT
GGAAGAGCGGGTGGGCCAGGCAgccgacgaggaagactacgaggcggcgg
gggcgctgcaagaggaattggagggtttgcgggaggagatggcggccTTG
GGTCCAATTGATGTGGTGCATTTGATCATGGACTCTtcggaagaggagaa
ggaggaggaggtggggggatga back to top
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