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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100155g6.10224.mrna |
| Orig protein id | gnl|cribi|Naga_100155g6.10224 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:597331..598200 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8112 ID=rna8112|Name=rna8112|organism=Nannochloropsis gaditana|type=mRNA|length=2769bp
ATCCCCACAGTGGATTATAAACCATTACTAACATATATAATCATTCTTCT
CTTTCAATCACGTGGTGCTCAACAGTCCACTTGCCTTCTGGCGGCACGTC
TAGCCAGGGCAATATTCAAGTTGCTGTTGCTATTCTCAAGCTCCTCCTCG
AGCAGCTGCTGAGCGCATTCCAGTCCGTACAAAAGCGATTTTCGGATCTC
CTGTTCAGCAATAGCAGTCTTGTAGAATTTTGCTGTAGGCCCTAGCGGCT
TTGATGGCGAGGTGGTCCATTTTTTGGGGTAATTTTGCACTCTGTATTAT
GGTCGCTTCACCTACGCTAGCTTTTCGATTGCCTCCCGTACCTACTACCA
TGCAGCGTCTCTTCCTGTCCCGTCCATCATCATCGTTGCCATTGAGAAGA
ATGAAGAATGCGATCTGCAGTGCACGTGCGGGCATCGGACATACTCGAGG
CGCTACCCATAAACCTGCGTATACGTGCATGTCATCCTCCACCTCGTCTA
CCCCTCCCCGCTCAACCTCATACGACGTCATCATCGTTGGAGGCGGACAC
GCTGGGTGCGAAGCCGCCGCCGCCAGTGCCCGCACGGGGGCCAAGACGGT
GCTGGTGACGCAGAAGCTGGAAACCGTGGGGGAAATGTCTTGCAACCCGA
GTGTGGGTGGGATCGGAAAGGGGCACCTGGTCCGCGAGATCGACGCTTTG
GACGGGATCATGGGCCGGATGATCGACCAAGCAGGGATCCACTTCAAGAT
ATTGAACTCGCGCAAAGGCCCTGCGGTGCGAGGGCCCCGGGCACAAGCCG
ATCGGGACCGGTATCGGACGGCGATGCGACAGGAACTGGCTGCCACGCCC
AATTTGACCCTCTTCGAAGGGAGTGTGGAGGACTTGGTTTTGGATGAGGC
GGTCGGGGGCAGCGGCGCAGGCGGGGTTGGGGGAAAGCAGATGAATGTGC
GGGGCATCACGACGGCGGCGGGAGAGACGCTCTCGGCGTCTCGGGTGGTG
ATTACCACTGGCACGTTCTTGAAAGGGAAGTGCTACCTAGGAAAGCAGAC
GTACGCAGCGGGGCGGCACTTAAGGAACAGCCAAGAGCTGGAGGCACCTT
CGATCGGGCTCAGTGTCACGTTGGAGGAGAAGCTGCGCCTGCCGCTGGGC
CGTTTGAAGACGGGGACCCCCCCCCGCTTGGACGGTCGGACCATCGACTG
GTCGGCATTGGAGGAGCAAGCCAGCGACGACCCGCCCCGGGCTTTCTCCT
ACCTAAACGCGGAGAGAGGCGTGGCGCTGGCGGACCGGCTGATCAAATGC
CACAAGACCTACACCACGCCCGACACCCACGCCTTGGTCATGGCCAACGC
CCACCTTCTGCCGGACTACGACGGCGATAACGGCCGCGGGGTGGGGCCCC
GGTACTGTCCGTCCCTCTTCAAGAAAGTGGAACGTTTCCCCGACCGAGGC
TCGCACATCGTCTGGCTCGAGCCGGAGGGGCTGGACACGGACGTGGTCTA
CCCCAACGGGCTGTCGGGGCCGTACCCCGTGGAGGTGCAGGAGAAGATCT
TGCACTCCATTCCTGGCCTGGAGGAGGTGGGCATCGTGGTGCCGGGCTAC
GACGTGGAATACGACTATGTGGACCCGCGCGCCCTCTCTCACACGCTGGA
GGTGAAGAGTGTGGAGGGTCTGTACCTGGCGGGGCAGATCTGTGGTACCA
CCGGCTACGAAGAAGCGGCGGCGCAGGGTTTGATCGCGGGGGGGAATGCC
GGGTTGGCGGCGTTGGGGCGGGAAGGGGTGGTGATTGGCCGGGACGAGGG
CTACATCGGCGTCTTGGTGGACGACCTGGTCACCAAGGGGACCAACGAGC
CCTACCGCATGTTCACTTCCCGGGCCGAGTACCGGCTGAGTCTGCGGGCG
GACAATGCGGATCTGAGGTTGACTGAGAAGGGGTATGGGGCGGGGCTGGT
GGGTACCGACAGGCTCGCTGCGTTGAGGGAAAGGGAGGAGACCGTAAAAC
ACGCCTTGACCCAGCTGGAGACGTTTGTGCTGCCCGTCCGGACGTGGATG
CAGCTAGAAGGGTTGAAAGGGCTGGAGATGTCAGTGAGGGACGGAGCACC
CAAGGCGGCGGCCGAGGTGCTGTCCCTCAAGGACATCACCCTCCCGGCCA
TGGAAACGGTCATGGCGCAGGTGGCGCCCGGCCTGCCCGTGGACGAGGAG
AGGGGCGAGAGGCCCGTGCGGATCGTGCCGACCCCCGAGGCCTGTCAGGA
TACCGTGGAGGCGGTGTGCAAGTACCGTGCTTACCTGGAACGGCAAGAGA
AGGAGATGGAGGCCTGGCGTCGGAACTCGGCATTGCGGATCCCGATGGAC
ATCTTGTACAACCGGGAGAACTTCCCTTCCCTTTCCGCGGAAGAGATTCA
GAAATTGGCGGCCCATCGTCCCTCAACATTTCACGCGGCCTCCCAGATCT
CGGGGATCACACCGCATTCCTTGGTCTACCTGTTCAATTACGTGACCAAA
CGGAGCAAAAACGAACGCGCCCAGAAAGGCCGACGTGTTCGGGTTCGAAG
GGATGAGGATCGGAGTGCAGAGATCCTGACGCATCACTGGCAGGATGTGG
AGGACCAAGCCACGGAGACGGAGGTGTTGGCGATGGAGGCCAAGCGAAGC
CTGGGGACGAGAGACGCCTAGAGTGGTCGATACAGGGGCCTCGTGCTGTC
GGGGATGGGACAGCCATGTACATAGGCATGTAAACGGGAAATAGAGACTG
AAATGTGGAAGTGAAGGAT back to topprotein sequence of rna8112 >rna8112-protein ID=rna8112-protein|Name=rna8112|organism=Nannochloropsis gaditana|type=polypeptide|length=145bp
MPPLREGHESFDIPPDRDPHAPSSFELQSPRYPKVIAKKHASSSLLHPSP
WAANVFPHSDDSLVTSSVKLGNLATGLAFTLAVARGGLSAILSPHARRAA
FVYGFAATFPLYLPAFLMGAFADHAMRKAPGKGVRRTRSYEYDLP back to topmRNA from alignment at KK037247.1:597331..598200- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8112 ID=rna8112|Name=rna8112|organism=Nannochloropsis gaditana|type=mRNA|length=870bp|location=Sequence derived from alignment at KK037247.1:597331..598200- (Nannochloropsis gaditana)
CTCCCTTTCTTGGCCAAAACATCTTTAAGGACCCGTGAGGCTTGTTGGTA
GTGGTCCATGCGCCTGAACGTGTAAAAATGTGGCGTGAGAGGGACGGGTG
GACGCCGGGGCTGGGGGTGGGGAGGTTCGCCTGTTCGTCGAGGCTGCGGG
ACTCCAAATTGATGGCACCCGTCCCATTGTTTGTACAGGTAATTCCACTC
ACTCCCGCCTAGCTATTGCATAGGTAGGCTTGCAAAGTCTCCATGCCGCC
TCTACGGGAGGGCCATGAGAGTTTTGACATCCCTCCGGACCGCGACCCCC
ATGCGCCTTCGTCATTCGAGCTTCAAAGCCCACGGTACCCGAAAGTCATC
GCGAAAAAGCACGCCAGCAGCAGCCTCCTCCATCCCAGCCCCTGGGCTGC
CAACGTTTTTCCGCATTCAGACGACAGCCTTGTGACCAGCAGTGTGAAAC
TTGGTAATCTTGCGACGGGCCTGGCGTTTACCTTGGCCGTGGCCCGCGGA
GGCCTCTCAGCTATTCTATCTCCTCATGCCCGACGCGCAGCTTTTGTGTA
CGGATTTGCCGCGACATTCCCATTATATCTCCCAGCATTTTTGATGGGTG
CATTTGCGGACCATGCGATGAGGAAGGCGCCGGGCAAGGGAGTGCGGCGG
ACACGGTCCTACGAGTACGATCTGCCTTAAAGCATGGCGTAGTTTGACGT
TGCGCGTTACAGAGGATTTTCGGATGAGATAGTGCATCAAGTCCGTGTCG
TATTAGTGGGTAGTCTAATCTCCCTGTAGTGGAGGAGGGGCGATCATGCC
ATGTACAAAAGAAGAAATCAAAAAGCAGGCAGCTGCAACGTACATCGATA
AAGGAAAAAAATGCTGGAAG back to topCoding sequence (CDS) from alignment at KK037247.1:597331..598200- >rna8112 ID=rna8112|Name=rna8112|organism=Nannochloropsis gaditana|type=CDS|length=438bp|location=Sequence derived from alignment at KK037247.1:597331..598200- (Nannochloropsis gaditana)
ATGCCGCCTCTACGGGAGGGCCATGAGAGTTTTGACATCCCTCCGGACCG
CGACCCCCATGCGCCTTCGTCATTCGAGCTTCAAAGCCCACGGTACCCGA
AAGTCATCGCGAAAAAGCACGCCAGCAGCAGCCTCCTCCATCCCAGCCCC
TGGGCTGCCAACGTTTTTCCGCATTCAGACGACAGCCTTGTGACCAGCAG
TGTGAAACTTGGTAATCTTGCGACGGGCCTGGCGTTTACCTTGGCCGTGG
CCCGCGGAGGCCTCTCAGCTATTCTATCTCCTCATGCCCGACGCGCAGCT
TTTGTGTACGGATTTGCCGCGACATTCCCATTATATCTCCCAGCATTTTT
GATGGGTGCATTTGCGGACCATGCGATGAGGAAGGCGCCGGGCAAGGGAG
TGCGGCGGACACGGTCCTACGAGTACGATCTGCCTTAA back to top
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