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Properties
| Property Name | Value |
|---|
| Product | oxidoreductase |
| Orig transcript id | gnl|cribi|Naga_100126g4.3035.mrna |
| Orig protein id | gnl|cribi|Naga_100126g4.3035 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:557580..559675 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8099 ID=rna8099|Name=rna8099|organism=Nannochloropsis gaditana|type=mRNA|length=3087bp
ATGGCAGAGAGTAGGATCATCAGCCCGGTGGACCTTGCCAGCCTTCCCCC
TAAAACAAGCGAAGTCAAAATCATTGGCGCGAGGATCCCCATAATGGCAG
CATCCGTGACAGCAGTCCATCGCGCCCCTACACCATACGAAGCCAATAAT
CACGCGCGCAGATGCCGTTCTCGAAGCGAGGGTTCCCCCATCACGCGCTC
TGGGGTTGCTCCCCGCAGCGATCACCAACCCAGAGCCGATAACGGTTCCA
CTAGCAGCAGTATGATGTCTAGCCTGTTTGCCCCTCCGGCCTCCCTCGAA
ACGGCTCCGCATTTCGAGCGGGAGGTAGAAGAGGGCAACATCGAGCACAA
GCTTCACCTCTGTCGGCCCTCGGAAGAGCGGCTCTTGCACTTGACCACAC
AATTGAACTGGCGACTCAACGAAAGTCCTCAAGGCGATGCCTTCTATTTG
ATTGGTGTTAGGGACGACGGGTTCCCCGAAGGCCTCCCTGACGTGGAGCT
GCGCGCCTCCATTGAGACCCTGCGGGTCATGGCCGGAGGGGTGCGAGCCC
GTCTGGTGCAGATCCGAGCTTTTCGCGGGGTGACGGGTGGAAGGATCGCC
CACGTTCGGCTTCAGCGAACAGAAATTCCTTCCTGGGGCCTGACGAGGGC
GCATGAGCGGGTCCGGGTGGCGGTTCTCGGCGGGGAGGAGGGGGGAAAGA
GCACCTTGGTGGGGGTGCTGACGACGGGCAAGCTGGACAACGGGCAGGGC
TTGGCGCGCATGCAGGTCTTCCGCCACAACCACGAGGTAGAGAACGGGAG
GACCTCGAGCGTGTCGCAGCACATCCTCGGCTTCCGGAAGGACGGCTCTG
TTGCCAATTACAAGGACTGCATGCCCCCTCCTGAGTCGTCCCTCCAGGCC
ACGACGCGTGTCGGCGGCGCCCGCGGCCATCGGTCTCGGAGCCTCAGCTC
GGAGGACGACAGCGATTTCCCTGCGCCTCCCTCCTTCGGGACCTCCCTCC
CTTCCTCCCTTTCGGCCCCTTCCGGGGCCCCCAGCGTCCTAAGCCCGGAG
GAAATCCAGCGGGAGAGCAGCCACGTCCTCTCCTTCATCGATCTGGCCGG
CCACGCCAAGTACCTCAAGACCACGTTCTCCGGCATCACAGGCCTATCCC
CCGATCATGCCATGGTCACGCTCCCTGCCTCGGCGGCGTGGGCTGGGGAA
GGGGGCCAGGGAGGGGAGGAGGTTGGCTGGGAGGACGGAGACGGGAAAGG
GGGGGGGTCGGCCCATGCCCCAGCCTCCCAGGAGGGCCCCGACGGGAGCA
GAGAGCAAGAGAGGACAAGGGAAGAGGAAAGGATGCCGAAGGAGGCCTGT
CGGCGGGACGGGCACTCGCGCCAGGCTCCATCCGGGGTCGTCCACGGGGA
CGCGATGGACCTTGGCCCCATGATGGACAGGGAGGACCCTGAGTCTCAAT
GTCGCCAAAGCTGGAGCGCAGGAAACGAGATCAAGGTGGAAAGGGGAAAT
GCTGCGTCGAATTCGTCGAGAAGGAGCCGAGCTCCGGACGGCATGCAGGA
TGAAGGGGGGGCGTGCCTGGCAGGGAGGGAGGACGATCCTGCCCGATGCC
GCGGCCTGTCTCGAGACGAGGGGAGCTCCGAGAAGGACAGAGACGCCTTG
GCCTACTTGGAGCTCGCGCTCTCGCTCCGGACACCGCTCTTTGTCGTCTT
GACTAAAGCCGATCTGGCCTCCGAGGCCCAGGTTAGACACACCATGGGCA
TGCTGCAAGCCGCTTTTCGCGCGCACCGAGGGCGTCGAAAGGGTCGAGAG
GGAGTCGTCAACTCACCCACAGCATCACCCGCGTCCTCGCCTCCTCTTTC
GACGAAGGCGGGCCCGGAAACGCCCGGCTGGACAGGCCGGGGCGTCGGGG
GCGGGGGCGCTCCAAGGGGGGCAGGGGAGGGTCTGCAAGAAAAAGGAGAC
GATTCTTTGTCGGATGGGGAGGGAGGGAGCTCCTGGGACAAGGAGGGAGA
GTCATGCTGGCTAGTACGGGGGGAGGCCGACTTAGAACGAGCCATCCGAA
CCTACGTGTCGGGGTACTCCTCCCCTCCCCCCGGAGCGGCCGCCTCGAGG
GTCGCGAGACATTCGGGGGCCCGGGCAACCGAGCCAGAGCCCGGGGAGGC
AGAAGGTGTTAAAAAGGACAGTGACCATACAGGAGCGCGGAGAGCGGGGG
AGGGAGGCCGGGCCAGGCTCGCGCCCTGTCTCCCCGTCTTCCTTGTCTCG
AGCGTCACGGGTCAGGGGCTCGACCTCCTCCGCCGCTTCCTCCGCGCGCT
GCCCCGGTCCCCCACCTGGGCGGAGGCGCGAGAGGATCGGATCGCGGAGG
TGCACATTGACGCCTCCCTGGATGTGGAGGGCGTGGGCTGCGTGCTAGCG
GGGGCTATCGACCGAGGAAGGGTCTCAGTGGGAGACCGCATGCTCCTGGG
CCCTCTCCGGGAATCCGGTGCCTTCGAGATGGTGGTCGTCAGGAGTCTGC
ATCTCCATAAGGTGCCAGTGCGGTCGGTGGGGGCGGGTCAATGCGTCACT
TTGACGTTCGCGCCTGAGGCGGAGGAAGCGATCTGCCTCGAGGGGCTACT
GTGCCCAGAAAGCCCAAATGAAGGCCCCCCTTGCTCTCCCTTGCAAGGTG
GGCAAGGAGTGCAAATTTGCGAGAATGCGAAGATTAATCATGGAAGAGAT
GTGGCAGAGGGGAGCGTCGACGAGAGGCTGTTTATGTCAGGTGTACCGCG
GGCGCTTACGACCAAAACCTACAAAGGCATCGTGCTTGTCTCCCCTGCCG
CCTGCCCCGTAGCCGCCTTCGAGTTCGAGGCAGAGATTGTAGTGCTAAGC
GACACCCATGGGCCGCTATCCTGTAATCTTGAACCCTCCCTTCACATCCA
TAAGACACGCCAAACAGCCAAGCTTCTGAGCATTGACCAAGGGCGACATT
CCTCGGCGGGTAAAGGAGAGACAGTGCACTGTCGTTTTCGGTTCTTGTTC
CATGCTGAGTATGTTCGTGTGGGGATGATGATAGTGGTGAGGATTGGACG
CACAGTAGCGGTAGGCTGGGTGGTGCAGCGTTGCTAA back to topprotein sequence of rna8099 >rna8099-protein ID=rna8099-protein|Name=rna8099|organism=Nannochloropsis gaditana|type=polypeptide|length=627bp
MTKIQKKKSVESKYRKWKGYGAKAIYANMAFFRDHGLLSRLVGMTGHAQD
HHHQDGHRDPPSFPIQEGRAIWGFLLAFLAYWLSHRFVYVENDPGALARA
SARGERVEWSSFDKFYKQAPTLFLQPSNHEELIGILREAAASNQTVKVVG
SGHSWTPIGLTDGVMLNLDKFNKVLSIDASAKTVTVQAGIRIRDLSAALA
AHDPPLALRNTGVLDRQSLAGALATGTHGTGIRYKIMSADVVALELVTAG
GNVLRGSRRDPDPAMRDMFEAAVLHLGALGVLTEVSMEVVEAFSVIKRNR
LLPLNTVLSTLPALAAGVDHLLVWFIPYTGRAQLMESLRIPPTKVPPTHD
WGDSRKHCQNFGSTSGDEASAAQSGSLMLSLTYNKVVASLRSFSASLLLA
SRPWLGVLQLRLLSAAGSFSSLFPVTYVPFWNRQVVAPALHLFAWGESFY
PHGHRGIVLDDHPDCYREAEWFLPLESFNAAMTAFLTFLDSRRGKIGANF
VVQIRVTHADDLWLSPFRREQGPQNNSHDNTGQDKTMSDSISWFVSVATL
VKGFDSDPYLRAAEREVWIPNGGRPHWGKLHYLAYHELSALYGEPFEKYL
RVRRRLDPQDMFMNSHLRELFFERAVR back to topmRNA from alignment at KK037247.1:557580..559675+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8099 ID=rna8099|Name=rna8099|organism=Nannochloropsis gaditana|type=mRNA|length=2096bp|location=Sequence derived from alignment at KK037247.1:557580..559675+ (Nannochloropsis gaditana)
ATGACGAAGAtccagaaaaagaaaagtgtAGAAAGCAAGTATAGAAAGTG
GAAGGGATATGGTGCCAAAGCCATTTATGCGAACATGGCTTTCTTCAGGG
ACCATGGTGTACGTTCCTTTATAGCGTTTCCTCGTGACCAAAGATGTTCT
TGTTCTTTGCGGGCTGCTTCACCTGCCATTCCTCCACGATTTCGTAATGA
GTATATCAGATCATATAGGCTATACACCTTGTAGGTGTAGAGGGCTTATA
AAATGTTCGAGTCTGACCATAAGTGCCGTCAGATTTCGTCTTTCCTCAAG
TattgttcctcctctcttaGCTCTTGTCGCGCCTAGTGGGCATGACAGGT
CATGCCCAGGACCATCACCACCAGGATGGGCATCGTGACCCCCCAAGCTT
CCCAATACAAGAAGGCAGGGCCATCTGGGGGTTCTTACTAGCTTTTTTGG
CTTATTGGCTCTCTCATAGATTCGTGTACGTGGAGAACGATCCTGGAGCT
TTAGCACGAGCAAGTGCCCGGGGAGAGCGTGTGGAATGGTCCTCTTTCGA
CAAGTTTTACAAGCAAGCTCCTACTCTCTTTTTGCAACCGTCAAATCACG
AGGAGCTCATTGGTATACTCCGAGAAGCCGCTGCCAGCAACCAGACAGTC
AAAGTGGTTGGGTCCGGACACTCCTGGACTCCTATCGGCCTCACGGACGG
GGTCATGCTTAATCTTGATAAATTCAATAAAGTCCTTTCAATCGACGCCT
CTGCCAAAACAGTGACTGTGCAAGCCGGGATTCGCATTCGAGACTTGAGC
GCGGCCCTTGCTGCACACGATCCCCCACTAGCGCTCCGAAACACGGGTGT
CCTCGACCGTCAGTCATTAGCAGGAGCTTTGGCCACAGGAACGCATGGCA
CCGGGATCAGATATAAGATTATGTCCGCAGATGTAGTGGCTCTAGAGCTC
GTCACGGCCGGGGGAAACGTGCTGCGGGGGAGCCGGAGGGATCCGGACCC
GGCAATGCGCGATATGTTTGAGGCAGCGGTACTGCATTTGGGCGCCTTAG
GCGTGCTCACAGAAGTGAGCATGGAAGTGGTTGAGGCATTTTCCGTCATC
AAACGCAATCGCTTGTTGCCTCTCAACACGGTGCTCAGCACACTACCAGC
ATTGGCTGCGGGTGTGGATCACTTGTTGGTGTGGTTCATTCCCTacacgg
ggagggcgcagcTCATGGAGAGCCTTCGGATTCCGCCCACCAAGGTGCCT
CCCACGCACGACTGGGGCGATAGCCGCAAGCACTGCCAGAATTTCGGCTC
CACGAGCGGTGATGAGGCCAGCGCCGCGCAGAGTGGATCTTTAATGCTGT
CTCTTACTTATAACAAAGTCGTCGCCAGCCTCAGGTCCTTCTCagcatcc
ctcctcctggcctctCGGCCCTGGCTAGGTGTTCTTCAGCTGCGCCTTCT
GAGTGCGGCAGGCTCTTTCTCTAGCCTCTTTCCTGTTACGTACGTCCCCT
TCTGGAACCGGCAGgtcgtcgcccccgccctccatctcttcgcGTGGGGG
GAGTCGTTCTATCCCCACGGCCACCGCGGCATCGTCCTAGACGACCACCC
GGACTGCTACAGGGAGGCCGAGTGGTTCCTGCCCTTGGAGAGCTTCAACG
CAGCCATGACAGCATTCCTTACTTTCTTGGACTCGCGCCGAGGGAAAATT
GGCGCGAATTTCGTCGTGCAAATCCGCGTGACCCATGCCGACGATCTCTG
GTTGAGTCCATTTCGAAGGGAACAGGGGCCGCAAAACAACAGCCACGACA
ATACTGGGCAAGACAAGACGATGTCGGATAGCATCTCGTGGTTTGTCTCC
GTTGCCACGCTCGTGAAAGGCTTCGACAGTGATCCTTATCTCAgggcggc
agagagggaagtgTGGATCCCCaacggggggaggccgcaTTGGGGTAAAC
TGCACTACTTGGCTTACCATGAACTGAGTGCCCTGTACGGCGAACCTTTC
GAGAAATATCTGAGGGTACGACGCCGACTGGACCCTCAAGACATGTTCAT
GAATTCACACCTGCGCGAGCTCTTTTTTGAACGCGCGGTTCGATGA back to topCoding sequence (CDS) from alignment at KK037247.1:557580..559675+ >rna8099 ID=rna8099|Name=rna8099|organism=Nannochloropsis gaditana|type=CDS|length=3768bp|location=Sequence derived from alignment at KK037247.1:557580..559675+ (Nannochloropsis gaditana)
ATGACGAAGAtccagaaaaagaaaagtgtAGAAAGCAAGTATAGAAAGTG
GAAGGGATATGGTGCCAAAGCCATTTATGCGAACATGGCTTTCTTCAGGG
ACCATGGTCTCTTGTCGCGCCTAGTGGGCATGACAGGTCATGCCCAGGAC
CATCACCACCAGGATGGGCATCGTGACCCCCCAAGCTTCCCAATACAAGA
AGGCAGGGCCATCTGGGGGTTCTTACTAGCTTTTTTGGCTTATTGGCTCT
CTCATAGATTCGTGTACGTGGAGAACGATCCTGGAGCTTTAGCACGAGCA
AGTGCCCGGGGAGAGCGTGTGGAATGGTCCTCTTTCGACAAGTTTTACAA
GCAAGCTCCTACTCTCTTTTTGCAACCGTCAAATCACGAGGAGCTCATTG
GTATACTCCGAGAAGCCGCTGCCAGCAACCAGACAGTCAAAGTGGTTGGG
TCCGGACACTCCTGGACTCCTATCGGCCTCACGGACGGGGTCATGCTTAA
TCTTGATAAATTCAATAAAGTCCTTTCAATCGACGCCTCTGCCAAAACAG
TGACTGTGCAAGCCGGGATTCGCATTCGAGACTTGAGCGCGGCCCTTGCT
GCACACGATCCCCCACTAGCGCTCCGAAACACGGGTGTCCTCGACCGTCA
GTCATTAGCAGGAGCTTTGGCCACAGGAACGCATGGCACCGGGATCAGAT
ATAAGATTATGTCCGCAGATGTAGTGGCTCTAGAGCTCGTCACGGCCGGG
GGAAACGTGCTGCGGGGGAGCCGGAGGGATCCGGACCCGGCAATGCGCGA
TATGTTTGAGGCAGCGGTACTGCATTTGGGCGCCTTAGGCGTGCTCACAG
AAGTGAGCATGGAAGTGGTTGAGGCATTTTCCGTCATCAAACGCAATCGC
TTGTTGCCTCTCAACACGGTGCTCAGCACACTACCAGCATTGGCTGCGGG
TGTGGATCACTTGTTGGTGTGGTTCATTCCCTacacggggagggcgcagc
TCATGGAGAGCCTTCGGATTCCGCCCACCAAGGTGCCTCCCACGCACGAC
TGGGGCGATAGCCGCAAGCACTGCCAGAATTTCGGCTCCACGAGCGGTGA
TGAGGCCAGCGCCGCGCAGAGTGGATCTTTAATGCTGTCTCTTACTTATA
ACAAAGTCGTCGCCAGCCTCAGGTCCTTCTCagcatccctcctcctggcc
tctCGGCCCTGGCTAGGTGTTCTTCAGCTGCGCCTTCTGAGTGCGGCAGG
CTCTTTCTCTAGCCTCTTTCCTGTTACGTACGTCCCCTTCTGGAACCGGC
AGgtcgtcgcccccgccctccatctcttcgcGTGGGGGGAGTCGTTCTAT
CCCCACGGCCACCGCGGCATCGTCCTAGACGACCACCCGGACTGCTACAG
GGAGGCCGAGTGGTTCCTGCCCTTGGAGAGCTTCAACGCAGCCATGACAG
CATTCCTTACTTTCTTGGACTCGCGCCGAGGGAAAATTGGCGCGAATTTC
GTCGTGCAAATCCGCGTGACCCATGCCGACGATCTCTGGTTGAGTCCATT
TCGAAGGGAACAGGGGCCGCAAAACAACAGCCACGACAATACTGGGCAAG
ACAAGACGATGTCGGATAGCATCTCGTGGTTTGTCTCCGTTGCCACGCTC
GTGAAAGGCTTCGACAGTGATCCTTATCTCAgggcggcagagagggaagt
gTGGATCCCCaacggggggaggccgcaTTGGGGTAAACTGCACTACTTGG
CTTACCATGAACTGAGTGCCCTGTACGGCGAACCTTTCGAGAAATATCTG
AGGGTACGACGCCGACTGGACCCTCAAGACATGTTCATGAATTCACACCT
GCGCGAGCTCTTTTTTGAACGCGCGGTTCGATGAATGACGAAGAtccaga
aaaagaaaagtgtAGAAAGCAAGTATAGAAAGTGGAAGGGATATGGTGCC
AAAGCCATTTATGCGAACATGGCTTTCTTCAGGGACCATGGTCTCTTGTC
GCGCCTAGTGGGCATGACAGGTCATGCCCAGGACCATCACCACCAGGATG
GGCATCGTGACCCCCCAAGCTTCCCAATACAAGAAGGCAGGGCCATCTGG
GGGTTCTTACTAGCTTTTTTGGCTTATTGGCTCTCTCATAGATTCGTGTA
CGTGGAGAACGATCCTGGAGCTTTAGCACGAGCAAGTGCCCGGGGAGAGC
GTGTGGAATGGTCCTCTTTCGACAAGTTTTACAAGCAAGCTCCTACTCTC
TTTTTGCAACCGTCAAATCACGAGGAGCTCATTGGTATACTCCGAGAAGC
CGCTGCCAGCAACCAGACAGTCAAAGTGGTTGGGTCCGGACACTCCTGGA
CTCCTATCGGCCTCACGGACGGGGTCATGCTTAATCTTGATAAATTCAAT
AAAGTCCTTTCAATCGACGCCTCTGCCAAAACAGTGACTGTGCAAGCCGG
GATTCGCATTCGAGACTTGAGCGCGGCCCTTGCTGCACACGATCCCCCAC
TAGCGCTCCGAAACACGGGTGTCCTCGACCGTCAGTCATTAGCAGGAGCT
TTGGCCACAGGAACGCATGGCACCGGGATCAGATATAAGATTATGTCCGC
AGATGTAGTGGCTCTAGAGCTCGTCACGGCCGGGGGAAACGTGCTGCGGG
GGAGCCGGAGGGATCCGGACCCGGCAATGCGCGATATGTTTGAGGCAGCG
GTACTGCATTTGGGCGCCTTAGGCGTGCTCACAGAAGTGAGCATGGAAGT
GGTTGAGGCATTTTCCGTCATCAAACGCAATCGCTTGTTGCCTCTCAACA
CGGTGCTCAGCACACTACCAGCATTGGCTGCGGGTGTGGATCACTTGTTG
GTGTGGTTCATTCCCTacacggggagggcgcagcTCATGGAGAGCCTTCG
GATTCCGCCCACCAAGGTGCCTCCCACGCACGACTGGGGCGATAGCCGCA
AGCACTGCCAGAATTTCGGCTCCACGAGCGGTGATGAGGCCAGCGCCGCG
CAGAGTGGATCTTTAATGCTGTCTCTTACTTATAACAAAGTCGTCGCCAG
CCTCAGGTCCTTCTCagcatccctcctcctggcctctCGGCCCTGGCTAG
GTGTTCTTCAGCTGCGCCTTCTGAGTGCGGCAGGCTCTTTCTCTAGCCTC
TTTCCTGTTACGTACGTCCCCTTCTGGAACCGGCAGgtcgtcgcccccgc
cctccatctcttcgcGTGGGGGGAGTCGTTCTATCCCCACGGCCACCGCG
GCATCGTCCTAGACGACCACCCGGACTGCTACAGGGAGGCCGAGTGGTTC
CTGCCCTTGGAGAGCTTCAACGCAGCCATGACAGCATTCCTTACTTTCTT
GGACTCGCGCCGAGGGAAAATTGGCGCGAATTTCGTCGTGCAAATCCGCG
TGACCCATGCCGACGATCTCTGGTTGAGTCCATTTCGAAGGGAACAGGGG
CCGCAAAACAACAGCCACGACAATACTGGGCAAGACAAGACGATGTCGGA
TAGCATCTCGTGGTTTGTCTCCGTTGCCACGCTCGTGAAAGGCTTCGACA
GTGATCCTTATCTCAgggcggcagagagggaagtgTGGATCCCCaacggg
gggaggccgcaTTGGGGTAAACTGCACTACTTGGCTTACCATGAACTGAG
TGCCCTGTACGGCGAACCTTTCGAGAAATATCTGAGGGTACGACGCCGAC
TGGACCCTCAAGACATGTTCATGAATTCACACCTGCGCGAGCTCTTTTTT
GAACGCGCGGTTCGATGA back to top
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