rna8094, rna8094 (mRNA) Nannochloropsis gaditana

Overview
Namerna8094
Unique Namerna8094
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length216
Alignment locationKK037247.1:547825..548315 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100126g10.3025.mrna
Orig protein idgnl|cribi|Naga_100126g10.3025
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:547825..548315 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100126g10gene7838Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8094rna8094-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22599.1cds8072Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8094 ID=rna8094|Name=rna8094|organism=Nannochloropsis gaditana|type=mRNA|length=216bp
ATGACCTGTCGGTGTCAGGGGCGGTGGACGAAGCAAGAGCACCTCGCCTT
TTTGCGAGGGCTTCGAGTATACGGAAGAGACTGGAATAAGATCCAAAGAT
TAGTTGGCACCCGCAGCCAACCTCAAGTGCGGAGTCACGCGCAAAAATAC
TTTCAGAGGATCGCGCAGGCGAAAGAGAGCAGGCGGATCGGTGAAACCCC
TACTACAGCGAGATAA
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protein sequence of rna8094

>rna8094-protein ID=rna8094-protein|Name=rna8094|organism=Nannochloropsis gaditana|type=polypeptide|length=86bp
MRHLLSTYEIQQTRLFDKQITVLKMELNAYFGWKPKRGCKVKYVRNNKLL
CTTRCPSACERFSPTNKHFNVICAFKATHQHYQIRS
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mRNA from alignment at KK037247.1:547825..548315+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8094 ID=rna8094|Name=rna8094|organism=Nannochloropsis gaditana|type=mRNA|length=491bp|location=Sequence derived from alignment at KK037247.1:547825..548315+ (Nannochloropsis gaditana)
ATGAGGCATTTATTATCGACATACGAAATACAGCAAACGAGACTCTTCGA
TAAACAGATAACAGTATTGAAAATGGAATTAAATGCTTACTTTGGCTGGA
AACCAAAGCGGTCGTACACTTTTGCATGAAAACAATTCTACAACGTAGGC
TGTGCAACTTTGCCACGTGATGTTTTCCTTGGTGCCTTATGTGATAGTGA
GCGTGGGAGCGACTAGTGCAAGAAAAGGAttcatggaggagaagatgatg
gAATGAGGTCAAAACGAGGTGTGATCAACCAAGGTAGGAGACGAAGGCCC
TATGTACGGTGCCTATCCAAATGGGCCCTTAAGAAGCAAGAGGGTGCAAA
GTCAAATATGTTCGGAACAACAAGCTGCTGTGTACAACCAGGTGTCCCTC
TGCATGTGAGCGTTTTAGCCCAACAAACAAACACTTTAATGTAATTTGCG
CCTTCAAAGCTACGCATCAGCACTATCAAATCCGCTCTTGA
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Coding sequence (CDS) from alignment at KK037247.1:547825..548315+

>rna8094 ID=rna8094|Name=rna8094|organism=Nannochloropsis gaditana|type=CDS|length=522bp|location=Sequence derived from alignment at KK037247.1:547825..548315+ (Nannochloropsis gaditana)
ATGAGGCATTTATTATCGACATACGAAATACAGCAAACGAGACTCTTCGA
TAAACAGATAACAGTATTGAAAATGGAATTAAATGCTTACTTTGGCTGGA
AACCAAAGCGAGGGTGCAAAGTCAAATATGTTCGGAACAACAAGCTGCTG
TGTACAACCAGGTGTCCCTCTGCATGTGAGCGTTTTAGCCCAACAAACAA
ACACTTTAATGTAATTTGCGCCTTCAAAGCTACGCATCAGCACTATCAAA
TCCGCTCTTGAATGAGGCATTTATTATCGACATACGAAATACAGCAAACG
AGACTCTTCGATAAACAGATAACAGTATTGAAAATGGAATTAAATGCTTA
CTTTGGCTGGAAACCAAAGCGAGGGTGCAAAGTCAAATATGTTCGGAACA
ACAAGCTGCTGTGTACAACCAGGTGTCCCTCTGCATGTGAGCGTTTTAGC
CCAACAAACAAACACTTTAATGTAATTTGCGCCTTCAAAGCTACGCATCA
GCACTATCAAATCCGCTCTTGA
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Synonyms
Publications