rna8081, rna8081 (mRNA) Nannochloropsis gaditana

Overview
Namerna8081
Unique Namerna8081
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1319
Alignment locationKK037247.1:519446..519896 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100528g6.9501.mrna
Orig protein idgnl|cribi|Naga_100528g6.9501
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:519446..519896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100528g6gene7825Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8081rna8081-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22615.1cds8059Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8081 ID=rna8081|Name=rna8081|organism=Nannochloropsis gaditana|type=mRNA|length=1319bp
TCCGTCATCTCTGCAGAAGCTGGAGGAGACGTGGGCATGGCAGAGCCAAA
AAATTATAAAATGGCGTCCGAGGTCAGGTACTCAGCCGAGGCATTTGCTA
AACGAGCGGCTCGAGCATTACGGCGGCAGGGGCAGACAAGCAGCAGGGAG
GCGGAGCAGAAAGATTGTGAGCAAGATGAAGAGTCCGACAACATGTGGGA
GAACACGTACGCTTTTTCATCATTTAAGCTCAGTGTTCAAGAGGAATTCG
GAGGGGAATCATGCGTGGGTGGGACTCAATGGCCGGGTGGTGTGCGTGTA
GCAAGATATCTCGACAACCCGAAAGCCTTTCCTCCAGGTACTTTAAAGGG
CAAAACCCTTCTGGATCTTGGTAGTGGTTGCGGTCTCGTGGCTGCTGTAG
CCGCCAAGCACGGTGCCCGCGTTGTAGCTGCGGAGAAAGACATCGTAATC
CCCTTATTAAAAGAGAACTTGACGACCAATGGTGTCCTGCTTGACCACGG
AGCATCTGAGCATAGCAAGGGAAATACTTCTCATGCCTCCTTGCCTTCGT
CTTTGCCTTCCAATAGCCCTCTTGAGGAAGGCAAGGTGGTCGTTCACGAG
TTTTATTGGGGTCCCGATGCCCGCCACCCACTCGCGCCTTTCGATTTAAT
CATAGCCGCGGCATGTTTGTACATGCCAAAGACGGTACCTTTGCTCCTGC
ATACTTTGTGGAACGTGTCGGACTCCCAGTCGTTGATCTTATTGTGTTCT
ATTTTGGGAGCCGATACCCTCCAGGCTTTCAAGGAGGAGGTGGGAGGCTT
TTTCCACATTCGAGCCTTGGATGAGACGAACGGAAACGTGATTGGGACTA
GCAGCGACGACAATTTATCGTCGATCGACGTGGCGACACGAATACTTATA
CTGGAGCGGAAGAGACAGTCTGGGTGAAGGAGGTCTGGGCGAGAGATAAC
TTGCAGGGCACTGAAATGATCGAGATGAATGACACTGCCTGGTGCATGAT
ATAAGTGTTTAAGTACAATCGCTTGTATATTATGAGTTCAATGACGAACT
GTGCGTCTTCTGTGGAATTCATTTCTGCCTCAGCAACTCGAGACTGTCAC
TGCTTCATTTAGTCGAGCTAGGTTACAAGTGTGCCTTGCTGATGACGTGT
GCCATACAACCATCACCACAAAGCGAAGAAAAATTCAAAAAAACATACAC
ATAGTGTTGTCAATGCTTTCCAGTTGTGATCTGAGCTTTGATGGGAGGCT
TTAAGATGGGCCCAACCAGATACTGTGCGGGCATACTTATAAAGCATCAA
GTCACATCCTGAGCATTGA
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protein sequence of rna8081

>rna8081-protein ID=rna8081-protein|Name=rna8081|organism=Nannochloropsis gaditana|type=polypeptide|length=122bp
MRCVLDTCMTFLGNRPKSLCFMAYIPLSPTQAMEASSRDISRRHSHFTQD
FLDQKPMIKDFLRFLIKNSFYVAFDTFLCGGCLTTTILEALELIWEDQVT
YDVCNINLSDFRRWSLVITLRV
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mRNA from alignment at KK037247.1:519446..519896-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8081 ID=rna8081|Name=rna8081|organism=Nannochloropsis gaditana|type=mRNA|length=451bp|location=Sequence derived from alignment at KK037247.1:519446..519896- (Nannochloropsis gaditana)
ATGAGATGCGTACTTGACACTTGCATGACTTTCTTAGGCAATCGACCCAA
ATCTTTGTGTTTCATGGCATATATCCCCTTGTCACCAACACAAGCAATGG
AAGCCTCTTCACGTGACATATCTCGCCGGCATAGCCATTTTACTCAGGAT
TTCTTGGATCAGAAGCCCATGATAAAAGATTTTTTGCGTTTCTTGATCAA
AAACTCATTTTATGTCGCGTTTGACACCTTTTTATGCGGTGGATGTTTAG
TGTAGTGACTCCTAGAGGTGAAAGAGAGCGCGACTGTACCATCAAGCAAG
TACCTCCTCCTCAAACTAATTTTTCAAGAAGACAACAACAATTCTCGAAG
CATTAGAACTTATCTGGGAAGACCAAGTGACATATGATGTATGTAATATC
AATCTGTCGGATTTTCGTCGTTGGAGTCTCGTAATTACGTTGCGTGTCTG
A
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Coding sequence (CDS) from alignment at KK037247.1:519446..519896-

>rna8081 ID=rna8081|Name=rna8081|organism=Nannochloropsis gaditana|type=CDS|length=738bp|location=Sequence derived from alignment at KK037247.1:519446..519896- (Nannochloropsis gaditana)
ACAACAACAATTCTCGAAGCATTAGAACTTATCTGGGAAGACCAAGTGAC
ATATGATGTATGTAATATCAATCTGTCGGATTTTCGTCGTTGGAGTCTCG
TAATTACGTTGCGTGTCTGAATGAGATGCGTACTTGACACTTGCATGACT
TTCTTAGGCAATCGACCCAAATCTTTGTGTTTCATGGCATATATCCCCTT
GTCACCAACACAAGCAATGGAAGCCTCTTCACGTGACATATCTCGCCGGC
ATAGCCATTTTACTCAGGATTTCTTGGATCAGAAGCCCATGATAAAAGAT
TTTTTGCGTTTCTTGATCAAAAACTCATTTTATGTCGCGTTTGACACCTT
TTTATGCGGTGGATGTTTAACAACAACAATTCTCGAAGCATTAGAACTTA
TCTGGGAAGACCAAGTGACATATGATGTATGTAATATCAATCTGTCGGAT
TTTCGTCGTTGGAGTCTCGTAATTACGTTGCGTGTCTGAATGAGATGCGT
ACTTGACACTTGCATGACTTTCTTAGGCAATCGACCCAAATCTTTGTGTT
TCATGGCATATATCCCCTTGTCACCAACACAAGCAATGGAAGCCTCTTCA
CGTGACATATCTCGCCGGCATAGCCATTTTACTCAGGATTTCTTGGATCA
GAAGCCCATGATAAAAGATTTTTTGCGTTTCTTGATCAAAAACTCATTTT
ATGTCGCGTTTGACACCTTTTTATGCGGTGGATGTTTA
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Synonyms
Publications