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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100023g34.3972.mrna |
| Orig protein id | gnl|cribi|Naga_100023g34.3972 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:427789..429222 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8046 ID=rna8046|Name=rna8046|organism=Nannochloropsis gaditana|type=mRNA|length=2077bp
AGTCAATACCCAATGCACAGGTATCACTTACTTAGAATGCCATGAAAATT
CGGGCAGCTATCAGAGCAAACCATCTCCTCCGGCCGGCACTAAGGCGATC
AACTGTTACTGGGGCATGTGGCAACCTTCATGCAGTTGACAGTACGTTGC
CTCCCTCTCATAGCCCCAAATATGAAACCTCTCCTTTCCCCTTCATCGCC
CCGGTGCGGAGAAAGCGCGATGCCATCATCGTCGGTGGGGGACACAACGG
CCTGGTTGCCGCAGCATACCTGGCAAAGCAGGGCCTTGACGTGTTGGTTT
TGGAAAGAAGAACTCTGCTTGGTGGTGCGGCCGTGACAGAAGAGATCGTG
CACGGGTTTAAGTTCAGCCGTGCTTCATATCTCGCGGGATTACTGCGACC
ACAGATCATCACAGAGCTAGGTTTGGAAAAACACGGCTTCAAATACCTCC
CTCGAGATCCTTCTTCTTTTACTCCCACAAATGTAGCGGGCAGGCACCTT
ATACTGGGGAGCAGTGAGGAGGAAAACTGGCAGTCGATCGCTCAATTTTC
GACGCGCGACGCCGACGCCTTCGTCGAGTACGAGGACTTTTTAGGCAAGG
CCCGCGAGCTAGTGGAGCCATTGCTGGATGGGGGGCCACCGAATCCCTTC
GACCAGGCCGCGAAATGGAAGGAACGCAGGCACACTCTTCAGACTTTGAA
GACACTTTTATCTGCGGGGTGGAAGCATCGTCAGTCCCTTTTGCCTTTCT
ACGAGCTCTTCACGGCACCTGCTGCTCACTTATTGGATCGTTGGTTTGAA
TCGGATATCTTGAAGGCAACGCTGGCGACAGACGCGGTGATCGGTGCCAT
GATTGGCCCCAGGCAGGCAGGGTCGGCCTATGTATTGCTGCACCACGTCA
TGGGGGAGGCGGCGGGCCGAAAAGGCGTATGGGCGTACGTAGAGGGGGGG
ATGGGCGCCATTTCGAAGAGTATTGCCGAAGCAGCGAAGGCATGGGGAGC
GGAAGTTGTAACAAGTGCTACGGTCACGCGGTTAGTGTATGATGACGCTC
AAAAAAGGATCGCAGGGGTGGAAATGCAGGACGGCACGCGGTAAGAGTAT
TTCTTTCGGAGCGTTCTGTCAAGACTTCATCGACAGCTTATGAGCATTGC
TTGTCCCTCACCTATCATAAATGTAGGCTAGAAGCATCCGTGGTTCTTTC
AAATGGGACACCCTATCACACCTTTCTTGAGCTTCTTCCCAGTAACGTGG
CTCGCGAGTCTTTGCCGCGCGACCTCCTCACACGCATCAAGCATATTGAT
TATTCCTCTGGGGTATTCAAAATAAATCTGGCATTAGATCGCCTCCCTAA
TTTCATTTGCTGTCCATCTGTCGACGCGGGAATGGCAGGTCCCCAACATC
GCGGCACAATCCACTTTGAAAACAATGTGCAGGAGATCGAAGATGCATAT
TTGGAGGCATATGTGAATCGACGGCCAAGTTCCCGACCAGTTATCGAGAT
GACGATCCCCTCGGTGCTGGACAGCACTCTTGCCCCACCTGGCAAGCATG
TCGCTTCTTTATTTGTGCAATACGCTCCTTACGCTCTGGATTCAAAGGTG
GGAAGTTGGAAGGACGAAAACTTCAAAGCGGCATTCGCGCGCAGGGTTTT
CCAAATCATAGACGAAAAAGCTCCCGGCTTTTCCACTTCCATACTGGGTT
ACGACTTGCTTTCACCGTTAGATTTGGAGCGAGTATTTGGTTTGCATGGT
GGTAATATCTTCCATGGTAGTCTAAGCCTCCACCAGCTAGCTTACGCCCG
TCCATCTTATCGGACTCCTCTCCCGGGACTGTATCTATGTGGCGCTGGGA
CTCATCCTGGGGGCGGCGTTATGGGGGCACCCGGTCGGAACTGTGCACGC
GTGGTACTGAGTGACCTTGGAAGATGAGAGATTTGGATAGTTTGGAATAC
GCTTGGCATAAAAGCATGTAGACCTAAAAATATTCATAATTTGATTGAAT
GAGTATGGTACGTTGCTTTTTTTAAATGGTACGATGCTTTTTTATTGACC
CGTTCGTGATGTCAGGCACTGTACTTG back to topprotein sequence of rna8046 >rna8046-protein ID=rna8046-protein|Name=rna8046|organism=Nannochloropsis gaditana|type=polypeptide|length=110bp
MLTSSCVYLVVWRRYSMYQRARQQNMWEFVQRFTLVLLIVHLNRDRSGTL
HIVLCVWYYSRMLQNQTVPASSEFALNVLLVDKNYVNITTIRHFVICKPT
MRSFCTQHLS back to topmRNA from alignment at KK037247.1:427789..429222- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8046 ID=rna8046|Name=rna8046|organism=Nannochloropsis gaditana|type=mRNA|length=1434bp|location=Sequence derived from alignment at KK037247.1:427789..429222- (Nannochloropsis gaditana)
GCACGCGACGTTCCTTGGCGCAAGTTCAGATTATCAACTTTGTGCACCCA
TACAATCAGCTTCATAGGAAGTGCGCGTCCAATCGATGCTCTAAATGCTC
ACATCGTCGTGTGTGTATTTAGTAGTCTGGCGTCGGTATTCGATGTACCA
AAGAGCAAGACAACAAAATATGTGGGAGTTTGTCCAGCGGTTCACTCTCG
TATTACTTATTGTTCATTTAAATCGGGACAGAAGTGGAACTCTTCACATA
GTGTTATGTGTCTGGTATTATTCACGGATGCTGCAAAATCAAACTGTACC
CGCAAGTTCTGAATTTGCACTTAATGTTTTACTTGTTGATAAGAACTACG
TCAACATAACTACTATACGCCATTTTGTAATCTGTAAACCAACTATGCGC
TCATTTTGCACTCAGCATTTGTCATAGTGGAGATTCAAGTACAGTGCCTG
ACATCACGAACGGGTCAATAAAAAAGCATCGTACCATTTAAAAAAAGCAA
CGTACCATACTCATTCAATCAAATTATGAATATTTTTAGGTCTACATGCT
TTTATGCCAAGCGTATTCCAAACTATCCAAATCTCTCATCTTCCAAGGTC
ACTCAGTACCACGCGTGCACAGTTCCGACCGGGTGCCCCCATAACGCCGC
CCCCAGGATGAGTCCCAGCGCCACATAGATACAGTCCCGGGAGAGGAGTC
CGATAAGATGGACGGGCGTAAGCTAGCTGGTGGAGGCTTAGACTACCATG
GAAGATATTACCACCATGCAAACCAAATACTCGCTCCAAATCTAACGGTG
AAAGCAAGTCGTAACCCAGTATGGAAGTGGAAAAGCCGGGAGCTTTTTCG
TCTATGATTTGGAAAACCCTGCGCGCGAATGCCGCTTTGAAGTTTTCGTC
CTTCCAACTTCCCACCTTTGAATCCAGAGCGTAAGGAGCGTATTGCACAA
ATAAAGAAGCGACATGCTTGCCAGGTGGGGCAAGAGTGCTGTCCAGCACC
GAGGGGATCGTCATCTCGATAACTGGTCGGGAACTTGGCCGTCGATTCAC
ATATGCCTCCAAATATGCATCTTCGATCTCCTGCACATTGTTTTCAAAGT
GGATTGTGCCGCGATGTTGGGGACCTGCCATTCCCGCGTCGACAGATGGA
CAGCAAATGAAATTAGGGAGGCGATCTAATGCCAGATTTATTTTGAATAC
CCCAGAGGAATAATCAATATGCTTGATGCGTGTGAGGAGGTCGCGCGGCA
AAGACTCGCGAGCCACGTTACTGGGAAGAAGCTCAAGAAAGGTGTGATAG
GGTGTCCCATTTGAAAGAACCACGGATGCTTCTAGCCTACATTTATGATA
GGTGAGGGACAAGCAATGCTCATAAGCTGTCGATGAAGTCTTGACAGAAC
GCTCCGAAAGAAATACTCTTACCGCGTGCCGTCC back to topCoding sequence (CDS) from alignment at KK037247.1:427789..429222- >rna8046 ID=rna8046|Name=rna8046|organism=Nannochloropsis gaditana|type=CDS|length=333bp|location=Sequence derived from alignment at KK037247.1:427789..429222- (Nannochloropsis gaditana)
ATGCTCACATCGTCGTGTGTGTATTTAGTAGTCTGGCGTCGGTATTCGAT
GTACCAAAGAGCAAGACAACAAAATATGTGGGAGTTTGTCCAGCGGTTCA
CTCTCGTATTACTTATTGTTCATTTAAATCGGGACAGAAGTGGAACTCTT
CACATAGTGTTATGTGTCTGGTATTATTCACGGATGCTGCAAAATCAAAC
TGTACCCGCAAGTTCTGAATTTGCACTTAATGTTTTACTTGTTGATAAGA
ACTACGTCAACATAACTACTATACGCCATTTTGTAATCTGTAAACCAACT
ATGCGCTCATTTTGCACTCAGCATTTGTCATAG back to top
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