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Properties
| Property Name | Value |
|---|
| Product | mmp37 mitochondrial-like protein |
| Orig transcript id | gnl|cribi|Naga_100106g17.1454.mrna |
| Orig protein id | gnl|cribi|Naga_100106g17.1454 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:453425..456637 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna803 ID=rna803|Name=rna803|organism=Nannochloropsis gaditana|type=mRNA|length=1755bp
ATGTCCGAAAAGCAGAACTTCTCCCCTGCACCCTCCCGACCGTGCGCATT
TAATGGAAAGAAGTTGGCCACACAAGAGAATGGTGACCATAACCATGTAG
ATGATTTGCCTAGGCGCGTGAACAGGGTGAATGATGCTTCGAGCGACCTA
GCCTCCGCGTGCCGCCGGTGTCGTGTTTTCAAAGGGATGGGGCCCAATCT
CGTAAATTTTCTAACCGAAATTCCAAAGACAGATCTCCACGTGCATCTTG
ATGGTTCTCCTCGGCTAAGTACGTTGATAGAGCTTGCCCAAGAGCACCAT
GTCGACCTTCCTGCCTATACCGAAGAGGGTTTGCGTGAATTAGTGTTCCG
TGAAACGTACGACAGTTTGGTGGACTACCTACGAGGGTTCCCTCTCATTG
TTCGCGTTCTGCAGCAACCTGGAGCGCTGGAGCGGATTGCCTACGAATTT
GCTTGGGACTGTTTGAATGAAGGTGTCCTTTACATTGAGCCGCGTTTTGC
GCCTCAGCTTCTGGCCACGGCGACATTGGACGTGATAGGAGTCTTGACGG
AGGCAACGCGGGGATTGGAGAGGGCTAAGAAGGAATACAATGCCCAACAG
TCGGTCAGGGATGGACAAAAACCTAGCTTTGATTTCGGCATAATATGCTG
CGCCATGCGCACCTTTATGACGGACGTCTCGGAGTACTACCATGCATTCT
GCTCCCTGCACCAGGATGAGCCTCAGGCGCTCGTCTACCAGCTTGCGGCC
AGCGCTTTGTTTCACGCAGCCATCAAAGCCAAGAAGGACCATGGCCTGCC
CGTCGTCGGGGTGGACATTGCCGGCCAAGAGGCCGGGTATCCCGCGGCGG
AATTCCAAGCCGCTTTCGAGGTCGCGCACAAGAATTTTTTGGGGGTGACG
GTGCACGCCGGAGAGGCCTTCGGTCCAGAAGCAGTCTTTCAGGCAATCAC
AGATCTGCACTGTGAGAGGCTTGGCCACGGCTACCATTTGTTCTCGGTGG
ACAAGGTGGTCAAGAAGGAGCGCCCGGCCGAATTTGTCGCGGGCCTGGTC
CAGTACGTGGCAAAACGAAGGATCATGCTCGAGGTGTGTCTGAGCAGCAA
CAGACAAACTATGACCGAGCTCCGCGATGACATTTCCAAGCACGCGCTCA
AGGATATGCTCGCCCACGGGATCTGCGTCTCCCTCTGCACGGACAATCGA
CTGGTAAGCAATACCACGGTAGTCAATGAGCTCCTCCTCGCCATCGAGCA
CTTTGCACTTACACCTACCGAGCTGAAAACCATGATATTGGAGGGCTTCA
AGCGCAGCTTCTTTCCAGGAAGCTACCTGCAGAAGAGAAAGTACGTCGGA
CAGGTCATGAACTACTACGAGCATTTGGAGCGGAAGTACGGCCTGAAAGA
CTGGTATCTCTCGGAGGACAGCATGTTCGAGGACCAACATCGCCCGCAGC
AGCCGCAGACTGAGGCTGGACGCGAGACAGGTACGCCGGCACGCGAGCAA
GGATGGGAGCAGGAACACGAAAACATTGATTCGACCGTCGGCGCATGCCT
TTTGCATTCCTCTGGCGACCGCATTCGATCCTTGAGTCCGCAATGGACAC
GGGCCCAGGCACTAGGAGAAAAGATGCCAGAGGGTGGGGAGGCGCTTGGA
GATGCCGCCCGAGGTTTTCATGTAGACATTCCTTGGGAGCGGAGGAGGAT
AGTTAGTGTACAGACAACCGTGTGGACGAGCCATCCCTCGATGATGTTCA
TATAG back to topprotein sequence of rna803 >rna803-protein ID=rna803-protein|Name=rna803|organism=Nannochloropsis gaditana|type=polypeptide|length=389bp
MQFHKHPRDELVHDKNMPYDAILQKLPAIDFAFAYGSGVFGQDGYSDHEQ
KEAIRGVNDQLLQPGGSTPSANMQLKRPPMLDLVVAVRNPIEWHRENLER
NWKDYSILRYLGAERLGQIQEDYGAALYYNTALPVPGHPNRVMKYGIIST
HALRRDLVDWQWMYAAGRMQKPVKILKAYEALAEAQRMNLRSAVRAALLL
LPESFSDFDLFTMIAGLSYRGDFRMTFGENPRKVKNIVTSNLPHFHELYS
PVLATFSSLTAAAADKGRFSQDLSPRVRASHLRQLPMALRQFLVPRKLRD
VMSSERSTKIVHSREEEDKALRDAWEQLSGKKTSKMVKLAIHKVVARSSL
TQGFKGVFTAGVWKALVYSLHKMNKYRIGMGKSNPTNKM back to topmRNA from alignment at CM002456.1:453425..456637- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna803 ID=rna803|Name=rna803|organism=Nannochloropsis gaditana|type=mRNA|length=3213bp|location=Sequence derived from alignment at CM002456.1:453425..456637- (Nannochloropsis gaditana)
TCGGAAACGTCAATTATTTGTGGCCTCTGCGTACCATTGGCGCAACAATT
TTATGCCCTGGACCACTATAAGACTGAAAGTTTCTGGTAGGGTGAAGGTC
TGTGGCAAATCTTCAGGTCCTACAGAAATGGGTTTTCTCGGTCGCCTCAG
ACCGTCGGTGGGATGTTGGCGCGAAGGACGTTGGACTCCTCATCGAAACC
TTGACTTCCTTTGGCAAGACTCCATGACCTTGATTTCAGGTCATTGTTAA
ACCATTCATACGGGTAGGCAGACAGGCAAAATTTTTATTGATTGGTACCT
GTGTGATCTTCTTCACACGAAAGGCCGGGGTCTTGATGATCATACAACTC
GACATCACTCCTCACAATCGAGAAGCAAGTAGTCCTCGCTCGCTCACCAT
CGCCTTGGTGTGACGTGACTCCAAGCATGGGAACGCATTTTCAAATGTTT
ATGGTTATAACTCGCACGTTAGTTTTGGAACAGCTAGGCACGGACCCCTT
GTGTCAAACGGAGTTGGATGTAAACCGTGCGAGTCTCTACAAGTGCTTAT
CCACTCATGGCCTAGAACCCCATTCTCAGGTAAACACGGCCTCATAAATG
CAGTTCCACAAACATCCTCGCGATGAGCTTGTTCACGATAAAAACATGCC
ATACGATGCTATATTGCAAAAATTGCCCGCTATAGACTTTGCTTTCGCCT
ACGGAAGTGGTGTTTTTGGACAGGATGGATATTCCGACCATGAACAAAAG
GAAGCAATTAGGGGCGTCAATGATCAACTCCTCCAGCCTGGAGGGTCGAC
ACCGTCTGCAAACATGCAACTTAAACGCCCTCCCATGCTTGATTTGGTGG
TAGCTGTGCGCAATCCAATCGAATGGCACCGGGAAAATCTGGAGCGGAAT
TGGAAGGACTATTCAATACTGCGATACCTGGGAGCCGAGAGGTTAGGGCA
GATACAAGGTGAGGATAGATCGCAATATTGGCGTCACTGCTGAAACGCTG
GCGTAGCCAGCGATGGCTGAGGCTATAGAGAGTTGTGACATCCTCCGGAT
GTCTTGGCCAAGAGATTTTCCGCGAAACCTTTACTTTTGAAGGCTCGCAA
CAGATTTGAATTCATAATTTCTCATACGTTATTTTCGCTGACACTTATCT
ATGCGCAATTGGTGATGCGAGTTAGAGGACTATGGCGCCGCTCTCTACTA
CAACACGGCTCTTCCTGTTCCAGGACACCCCAACCGCGTCATGAAGTATG
GCATCATTAGCACCCATGCTCTTCGGCGGGACCTGGTCGATTGGCAATGG
ATGTATGCAGCAGGTGCGTTTTAAAGGGAAAGCTATACGCGCAAGGGACA
TAATTTGAGAGGTCGTTGCGCTAATTATTGTCTGTTTGCTTTTTCCTAAC
ATCAAATCGATCGATGCTTCTCCATACCTCACAGGGCGCATGCAGAAACC
TGTCAAAATTCTTAAAGCTTACGAGGCACTTGCGGAAGCACAACGCATGA
ACTTGAGAAGTGCCGTACGCGCGGCTTTGCTCCTGCTTCCCGAGTCCTTT
TCCGACTTCGACTTATTCACGATGATCGCGGGCCTGTCATATAGGGGCGA
CTTCCGCATGACTTTCGGAGAAAATCCTAGAAAAGTGAAAAATATCGTCA
CTTCCAACTTACCACATTTTCATGAATTGTATTCTCCTGTTTTGGCGACT
TTCTCGTCTTTGACAGCTGCCGCTGCAGACAAAGGACGGTTCTCTCAAGA
CCTGAGCCCTAGGGTTCGGGCCAGCCACCTCCGTCAGCTTCCAATGGCAC
TGCGGCAATTCTTGGTGCCGCGAAAACTACGAGACGTTATGTCAAGCGAA
AGAAGTACAAAAATTGTGCATTCAAGAGAAGAGGAGGACAAGGCTCTTCG
AGACGCCTGGGAACAGTTGTCAGGGAAGAAGACTTCGAAGATGGTGAAGC
TTGCCATCCACAAAGTGGTAGCTCGCTCAAGTTTGACTCAAGGCTTCAAA
GGCGTATTCACGGCAGGTGTGTGGAAAGCACTCGTTTATAGTTTACACAA
GATGAACAAATATCGGATAGGGATGGGGAAATCGAACCCCACAAATAAAA
TGTAAGCAAGCAACTGAAGACCATCAGCAAATAAATAATTCATGTAGAAA
CAAAACGGTTTATTATTATGTCAGTTTATGGGTGGATAAATAGCAGCGAC
CGCTTTAATCCAGAAATGCACAGCCTGCCAGAAGTATTATCATCACTCCA
GTCGATTGCCTCCCAACTTAAATTTTAAATTTTTTGAATCCGATTTCTGA
TCCGCTTCGAATATTTGACAGCAAGTCAGCTTTTCGAGCATGTGCTTTGG
GCACCACGCTGAAATATAAGCACGGTCTCGTGCGACCGACAAATTAATTA
ATTGATTAAGCTTTCCTTCCTGGGACTGGGTTTTCATTCCTTGGTGGGGG
TAGGCGGTTCAAAGAAGTTGCATGGGAGAAGACGAGGGAGAAAAAGTTCA
ACAAATACTAACTTGAGCTCATTAAAGACAACAAGCTTTTATGAAACAAG
AGGGTGTTCATATATCTTGACCGTCATTTATATCAATAACGATAAGATTC
AGGATCGAAAGGATGATGGATGTGAATCGAGATATAATTTATCCGAAGAG
ATATGCATGTTCGGTTTCCCCCCGAGGACCAAGAATGTTGAGATCAGATT
AGTGTCTATTGTGGACTTTGAATAGATTTTAATAATGCTGAAACAAAATT
TCATGTTGTTGAGCTAGGCTTCTCAAGAGATGGCCTTCCTATGCTGTGCG
ACAGGAAGTAAGGGGTTGAAAGAACTCACTTTTTTCGTATGAACGAGTCA
CAACAAAATTCAAGTCAAACCTTACCACAACGTCGTAATATTTCCTTAGG
ATTTTTTCGATAAGCCGATACTTTTTCCTGTCTTTATTCGACCATATGAA
TGCGATGCTGCATTTGCTTCTACTGGCTCAATTTCTCCGCCCAAACGCCG
CTGTGTGCTTACGAGACAATATGGATAAGGAAAGGGTGCCGCAAGAGCAA
AACGGGCATATTCGAAATCTGCAAGAGGTATTTGAGTACGCTGTCGAGAG
AGGGCGCCTTGATCCGCACGTAGCACAAGGTCATACATTTGATAATGGCA
ATTTGGTCTTACCCGTGTATCAGTCTCTCGGACCGTCACAAGTCGGTAAG
TATCCTGTGTGTG back to topCoding sequence (CDS) from alignment at CM002456.1:453425..456637- >rna803 ID=rna803|Name=rna803|organism=Nannochloropsis gaditana|type=CDS|length=3510bp|location=Sequence derived from alignment at CM002456.1:453425..456637- (Nannochloropsis gaditana)
GGCGCATGCAGAAACCTGTCAAAATTCTTAAAGCTTACGAGGCACTTGCG
GAAGCACAACGCATGAACTTGAGAAGTGCCGTACGCGCGGCTTTGCTCCT
GCTTCCCGAGTCCTTTTCCGACTTCGACTTATTCACGATGATCGCGGGCC
TGTCATATAGGGGCGACTTCCGCATGACTTTCGGAGAAAATCCTAGAAAA
GTGAAAAATATCGTCACTTCCAACTTACCACATTTTCATGAATTGTATTC
TCCTGTTTTGGCGACTTTCTCGTCTTTGACAGCTGCCGCTGCAGACAAAG
GACGGTTCTCTCAAGACCTGAGCCCTAGGGTTCGGGCCAGCCACCTCCGT
CAGCTTCCAATGGCACTGCGGCAATTCTTGGTGCCGCGAAAACTACGAGA
CGTTATGTCAAGCGAAAGAAGTACAAAAATTGTGCATTCAAGAGAAGAGG
AGGACAAGGCTCTTCGAGACGCCTGGGAACAGTTGTCAGGGAAGAAGACT
TCGAAGATGGTGAAGCTTGCCATCCACAAAGTGGTAGCTCGCTCAAGTTT
GACTCAAGGCTTCAAAGGCGTATTCACGGCAGGTGTGTGGAAAGCACTCG
TTTATAGTTTACACAAGATGAACAAATATCGGATAGGGATGGGGAAATCG
AACCCCACAAATAAAATGTAAAGGACTATGGCGCCGCTCTCTACTACAAC
ACGGCTCTTCCTGTTCCAGGACACCCCAACCGCGTCATGAAGTATGGCAT
CATTAGCACCCATGCTCTTCGGCGGGACCTGGTCGATTGGCAATGGATGT
ATGCAGCAGATGCAGTTCCACAAACATCCTCGCGATGAGCTTGTTCACGA
TAAAAACATGCCATACGATGCTATATTGCAAAAATTGCCCGCTATAGACT
TTGCTTTCGCCTACGGAAGTGGTGTTTTTGGACAGGATGGATATTCCGAC
CATGAACAAAAGGAAGCAATTAGGGGCGTCAATGATCAACTCCTCCAGCC
TGGAGGGTCGACACCGTCTGCAAACATGCAACTTAAACGCCCTCCCATGC
TTGATTTGGTGGTAGCTGTGCGCAATCCAATCGAATGGCACCGGGAAAAT
CTGGAGCGGAATTGGAAGGACTATTCAATACTGCGATACCTGGGAGCCGA
GAGGTTAGGGCAGATACAAGGGCGCATGCAGAAACCTGTCAAAATTCTTA
AAGCTTACGAGGCACTTGCGGAAGCACAACGCATGAACTTGAGAAGTGCC
GTACGCGCGGCTTTGCTCCTGCTTCCCGAGTCCTTTTCCGACTTCGACTT
ATTCACGATGATCGCGGGCCTGTCATATAGGGGCGACTTCCGCATGACTT
TCGGAGAAAATCCTAGAAAAGTGAAAAATATCGTCACTTCCAACTTACCA
CATTTTCATGAATTGTATTCTCCTGTTTTGGCGACTTTCTCGTCTTTGAC
AGCTGCCGCTGCAGACAAAGGACGGTTCTCTCAAGACCTGAGCCCTAGGG
TTCGGGCCAGCCACCTCCGTCAGCTTCCAATGGCACTGCGGCAATTCTTG
GTGCCGCGAAAACTACGAGACGTTATGTCAAGCGAAAGAAGTACAAAAAT
TGTGCATTCAAGAGAAGAGGAGGACAAGGCTCTTCGAGACGCCTGGGAAC
AGTTGTCAGGGAAGAAGACTTCGAAGATGGTGAAGCTTGCCATCCACAAA
GTGGTAGCTCGCTCAAGTTTGACTCAAGGCTTCAAAGGCGTATTCACGGC
AGGTGTGTGGAAAGCACTCGTTTATAGTTTACACAAGATGAACAAATATC
GGATAGGGATGGGGAAATCGAACCCCACAAATAAAATGTAAAGGACTATG
GCGCCGCTCTCTACTACAACACGGCTCTTCCTGTTCCAGGACACCCCAAC
CGCGTCATGAAGTATGGCATCATTAGCACCCATGCTCTTCGGCGGGACCT
GGTCGATTGGCAATGGATGTATGCAGCAGATGCAGTTCCACAAACATCCT
CGCGATGAGCTTGTTCACGATAAAAACATGCCATACGATGCTATATTGCA
AAAATTGCCCGCTATAGACTTTGCTTTCGCCTACGGAAGTGGTGTTTTTG
GACAGGATGGATATTCCGACCATGAACAAAAGGAAGCAATTAGGGGCGTC
AATGATCAACTCCTCCAGCCTGGAGGGTCGACACCGTCTGCAAACATGCA
ACTTAAACGCCCTCCCATGCTTGATTTGGTGGTAGCTGTGCGCAATCCAA
TCGAATGGCACCGGGAAAATCTGGAGCGGAATTGGAAGGACTATTCAATA
CTGCGATACCTGGGAGCCGAGAGGTTAGGGCAGATACAAGGGCGCATGCA
GAAACCTGTCAAAATTCTTAAAGCTTACGAGGCACTTGCGGAAGCACAAC
GCATGAACTTGAGAAGTGCCGTACGCGCGGCTTTGCTCCTGCTTCCCGAG
TCCTTTTCCGACTTCGACTTATTCACGATGATCGCGGGCCTGTCATATAG
GGGCGACTTCCGCATGACTTTCGGAGAAAATCCTAGAAAAGTGAAAAATA
TCGTCACTTCCAACTTACCACATTTTCATGAATTGTATTCTCCTGTTTTG
GCGACTTTCTCGTCTTTGACAGCTGCCGCTGCAGACAAAGGACGGTTCTC
TCAAGACCTGAGCCCTAGGGTTCGGGCCAGCCACCTCCGTCAGCTTCCAA
TGGCACTGCGGCAATTCTTGGTGCCGCGAAAACTACGAGACGTTATGTCA
AGCGAAAGAAGTACAAAAATTGTGCATTCAAGAGAAGAGGAGGACAAGGC
TCTTCGAGACGCCTGGGAACAGTTGTCAGGGAAGAAGACTTCGAAGATGG
TGAAGCTTGCCATCCACAAAGTGGTAGCTCGCTCAAGTTTGACTCAAGGC
TTCAAAGGCGTATTCACGGCAGGTGTGTGGAAAGCACTCGTTTATAGTTT
ACACAAGATGAACAAATATCGGATAGGGATGGGGAAATCGAACCCCACAA
ATAAAATGTAAAGGACTATGGCGCCGCTCTCTACTACAACACGGCTCTTC
CTGTTCCAGGACACCCCAACCGCGTCATGAAGTATGGCATCATTAGCACC
CATGCTCTTCGGCGGGACCTGGTCGATTGGCAATGGATGTATGCAGCAGA
TGCAGTTCCACAAACATCCTCGCGATGAGCTTGTTCACGATAAAAACATG
CCATACGATGCTATATTGCAAAAATTGCCCGCTATAGACTTTGCTTTCGC
CTACGGAAGTGGTGTTTTTGGACAGGATGGATATTCCGACCATGAACAAA
AGGAAGCAATTAGGGGCGTCAATGATCAACTCCTCCAGCCTGGAGGGTCG
ACACCGTCTGCAAACATGCAACTTAAACGCCCTCCCATGCTTGATTTGGT
GGTAGCTGTGCGCAATCCAATCGAATGGCACCGGGAAAATCTGGAGCGGA
ATTGGAAGGACTATTCAATACTGCGATACCTGGGAGCCGAGAGGTTAGGG
CAGATACAAG back to top
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