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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100023g9.3978.mrna |
| Orig protein id | gnl|cribi|Naga_100023g9.3978 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:376687..377923 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8022 ID=rna8022|Name=rna8022|organism=Nannochloropsis gaditana|type=mRNA|length=4475bp
TTCAGCCCTTTGAATGCCTATCTTGGTCTACCACCTCAATTGTTTCTCAC
AACGAGTTTATCTTTTTAGTCGGTCTGCCGCTTTACGATAGTTTCGGCGA
TGAGCTTGAATTTGTACGGATACAATTATTACCTTCGTCAATATTTTGAC
CCCTACATGGTACCAGACCGGCAAGTCAGAGGTATTTTGCGCGAAAGAAA
CAAACAACTACGTCAAGCTTTAATTTCAAATTTCATACCAGAAAACATGC
ATTGGAATTGGTTTGGTGTCTGATGAAAACCTAGATCATCAAACGTTGCT
TGAGTGACTTGATCATGCGGTGACCAGCACTGCCATGATCGACACGGGCC
TGGAAAATGTCAAAAGCCTCCAAGCCGTTAGCTGGCATAGCTTGGCGGAC
TCTTTCGCGGCACCCCATGTCACAAGTGAGACTCAACAGAATTAGCAAAC
CCTCTTCTATGATATCGTTCTCATTCATATGCTTATCCATGGCACCAAAA
AGCGTACACAATGCCTTCGGACTGGTGAGCAGTTCCTGCGTGTCTTCTTG
ACTAATGGCCGCTTCAAACCGAAGCGCATTGAAAGCGCTTGCGACCAAGT
GTTTGCACGTCAGAGACTCGTCTAAAATCGCGAGTATATTTTGTATTTGC
ACTCCAACTGCCCCATGTAATATAGGGGAATGAGCCGGCACCGTGCTTTG
ATGCAGTAATGCCGCTAAATCGTCATTTACCATGCAAACCAGTGATTTCA
TATCGGCTGCAGAACCTGTGAACCATATGGGAAAATTGGGTTTTGACCTT
GAGTGTTATAGCTCAGTGCCATGTGCCCCGCCGCAAGCTCTCAGATCCAT
TCGGTGTTCGTTACGAGTGAGCTACTTACGATATCGGCGATCCCGCTCGT
TTTCAAGCGAATCCCGGACTATTCGGCACGGCAAAGTGGTAGTGGGAAAG
GGCCGCTTGCAAGGATAGCTACTATTGTAGTTACCTTCGGAAGGCCGATG
AGTAGCGTGCTCAAAAGAAGAGTCATTGCAACTAGTCTTGTCGATTTTTC
TTGAAAAGGCGTTACTTGGGCCACTGGTGCAAGCATTTTTCCGTCGTTGA
AGGTTTTCTGCATTAGCAACGAGCCGATCACATTGCATTTGATAAGAATT
GTCATTTACAAAGTGAGTGGCTTGTGGAGTTGTACAAATGGACATATCTG
CTCTTCTCCGTATTTCTTCTTGCGATTTCCGCCTTTGTCTGGTCCTATCT
CGTCCTCCTGTGTCTTTTTCTCTCCGTTCCTCATTTTTTTCTTGCCTCCA
TTCCCTCGATGTTCCACCGGCGACATGACTCGAATGTTTCCGTTCGCATA
TTTTGGCAACCGATGGCTCCTGAATTTGCTTCGATTTCTTAGCGTTGCCA
GCAGTCATGTGCAGAGAAACGCTCCTAGTGGAAACGCCGATGAGGTGCTT
CTTTGGGGAAAATTCCTTGCTTTGTCCTTGAAGACAGCTCGACGCATTGA
TGTGGGCCAAGTTTTTCCTTGTGCAGTATCTTTCCATGTGCTGCTTCGGC
AAATAAGAGTAACGAGCCTCAGACTTAACTCTGGCAGGGGGTTGTGTTGA
AACGCTCTCCTTACCAGGTGCTGCGCCAGAAGAGCCACTCCTTTCCTTAT
CAAGATGAGCGGTTGGAATGCGTTGTACGCCTCCACTAGTGAATTGACTT
TCGGGTCTCTGTTTCTTTAAATTTGATAAATGATCGTGATGCCAATTGGA
ACTTATCACGCTTGATTCATCGTTGACTTCCGCTCTTCGGGCTGGATCTG
GGGCATGTGGATCCAAGACAAGCCTGATGGCCCCGATAGCGCGTGAGACG
CGCATACCCCCTGATTTTTTAGGGGCCCTCTCGCCGCGCTTACACCGAAT
GGACGGTAGCTCAGACGTTGATAGTTTCGCCAATGGCAACGGTGCGGACT
CCTCATTAGATTTACAAACAAGTGGCACACTTCTATCCGTCGAGGGACCC
TCCACGGCCTTCGAAGCTGGATCTGCTCTTCTTGCATTTTGCTTATTTTG
TGTTCGTGGCAGGTGTATGGATGTGCAAGCTTTCGTTATCGTTTTGATGC
GCGTGAAAGTGCCCAAAAGGGCAAGTGGGTTGCATCCCACCGATCGTGTC
CGCACCTCACGAGTAGAGGGCGATGTAGCATTGCCACAATCTCCACTTTG
AAGCATCAAGGTGGTGCTTTCATAATCTTCTGCCTCCTCTGTCAAGGGTG
AAAGACTCAGAAGCTGCTCCACAGGCCGGTCATCCTCCTCGTCCTCTAAG
ACATTTCTCTGTAGCCGCTCCGAGACAACTTCCCCCTTTCCTTCGCGTAC
CACCAACGGCATATTAATTGCGATTTCTTGGTCATTCACAGGAATAAACC
TCTTCTCCGCCAGCGTAGGAATCGTCTTAGAGCGACAAAGTGGGCGAGCA
TAATCCATTTTACCGTCTTCAACGCTCTCCGTCCTGCACGTTCGCGACCA
ACCACTCACACCAAGAATGGAGGATTTACGATGGACTTTGTCGCATCGAA
CGTTGTTTGTGTTTTCATTGCCATGATTTTTTCCATAGTCTTCAGTGGGT
GCCGAAGTGCTGAAGTCCAGGGCTTGTGCCTGCTCTTTCGATTTTCCTGC
ATTGCACCTCAAGAATGCTACCAGACGACCTGGGCGAGTCGATGATTGTG
GTGACGAGGACGACGAAGGAATTGGTAACATGGCAAGAGTTGTCACCATA
GCATTATTACTAAGATCGGCTTCCTTCGCTGTTTGGAACGCCTCTGCTGG
AAGACCCGAGCGCTTATAGTTGTCGACTATTGTCTTTTCATGATAACCTG
ACCACGCCATTGTTCTTTCATCATTTGTGGCGATAACATCAACACAGTCA
ACATTGCTTTCTGTATAAGTCGTGGTAGACTTGACACGAAGCTGTTTCAT
TTTAGGCAGGCCATTCTGAAGAGGCCGTCTGGGCGGGTCGTTTTTCAGTC
CTTGCCCGAGTGCTCCTATTGGCGTTACGTTCATGCGCTCAGCACGCCAG
CTATGCTGCAATCGAAGCATATCATTGGTCACACCGTTGAGACCGTCGAT
ATCCTCATTTGTCCGACACGTGGGCATCCGTTCATGATGCCAGCGACGTA
CGAAGCGCTTCAGCACCTCTTTCGCCTTCGTCTCTTCAAACTCTTCCATT
TTTCTCGTCAATCCAGCTCCTGCTTCTTGTAAAGCGCAGCATCGACGAGA
CTCTGCATCAAGAAGAAGTTTGCGTAAATCCCGCTGAAGTAAAGAAGCCG
CGTCAAAACGCTTCTTAGCTTCGAGTGCTAGCGCAGCAGACCTTACCCCC
CATCCGCGTGCCACGCGTTGAATCGTCAACACGGCACTCACGCGCCTCGT
CAGATCCATATTGAACTGCTTATGCTGCTGTTTTTGACGCTTTCTCGACA
AACCTATGGCCATATTCTGCCACTTTGTGGTGACATCGGTATCTAAGACC
AGCCGACGCCGAATACATTTCCGCAACCAAGTCTGAAGGCGGAAAATGGC
AGCTTGGTGACGTTTTAGCCGCTGACGGGCAAGACATCGAAGGAGAAATC
GCTGCACTCGAGCTACCCCGCTAGTCTGAGTGCGCCAGTACCGAAAAGCA
GCAGCCATCTTGTACCGGTCATGCACATTGATGACCTTGACAACGAAAGC
ACACGACTTTCTTATCGCGGCCCATGCGCGCATCTTGTCCCGGCGTCGAA
AAAGTGATAGAATTTTCTCTGCACAGGCGTGACGATGCGTTTGAAGCATC
GCTTCAGACTTTTGAGCCACATCGGCCGCTTCCCGTCCCCTTGCAGAATT
CGCATTGAGATAGAGATACGCAAATGCGTGTTTCTTTTCATGTCTGTTAA
TAAGACTGAGAAGTTTATTTAAGGCCGTGGTCAGAAGCCGCATGTCATTC
ATTCTGTTATGAATCCTAGCAAGTGCCGCGTATAGTGTCCTTCGTGAGTG
TATGCGCTTATAGATGTCATTCAAAGTCCAAAGAGCGCCGTGTTTTTCTT
CCCGTATACCCAGCCCTGCGGTCGGAGAGACAGTGTTAAGCATCACAGCC
TCTTGTCGGACATGGATTGCTCCTTGTCGCTGCTCGGTGGACGTAACACG
GTTTGACTCCTGGACGTGTTCCCCAGGGAGGCATGACTTCGAAGAAGACA
GAGTCAAGATCATTGTCCTTTGTACACCTGTTGTTCTGCTTTTCCCCGCC
ACCTCCAGCTCTTCTTGAACACCAGAAACTTCACGCCGGGCCAATAACAT
GCGCCACTTGCGCTGTAGCCGCAGAGCTGCCGCTTTCTTCTCAGCAATCA
TGGGAAAAGAAGTTCCTTCGGCACTTGCAATTGTTCTAGATACGTCCCTG
ACCCCGCTTTTTCGGGTTCCATTTCCAGTCACACCTTCGAGTATCATGTC
ATTTACGACTATCCCCTCTTTCTCG back to topprotein sequence of rna8022 >rna8022-protein ID=rna8022-protein|Name=rna8022|organism=Nannochloropsis gaditana|type=polypeptide|length=65bp
MRLYLQHARIYAPLHILHGPGGANKETYPGMKQVEDGQSSIFAFKGRSIF
MLEAMVCKPDLSAKL back to topmRNA from alignment at KK037247.1:376687..377923- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8022 ID=rna8022|Name=rna8022|organism=Nannochloropsis gaditana|type=mRNA|length=1237bp|location=Sequence derived from alignment at KK037247.1:376687..377923- (Nannochloropsis gaditana)
TCACATATGATTTGTAACACATGCTCACACTTTGCACAATATTTTTACCA
ATAGGAAGTTCTGCAAACGACAAGCACGAAAAATTGCAAGTATGAAGGGC
ATGCATTCTTGCCTCAAACGTTCATACACAAAAAATATAATCAACACGAC
ACAACGAGAGACTTACTCACCAAATTACAGGCTTCAATGTTTGTGCAACT
TGCACATGCATGCAGTGCATTCTATTTTATATGATAAATTTCTATGCGTC
ATGCAACGTAGACGGATCTTGGTCTATTGATTGAGAAATAGTATACCATT
CATCAACTTTAAAAGCAGGTAGGTACGAGGGTGTTCTACATTTTGGTGCC
CTCCTTTGTTCGTGTACCCTTCCATAGGAAGCTTAAAGAAAAGTTAATGA
TTCATTTCAATAGACAGAAGCTGGGCCCCTATGAAGTCAAATTCATGCGC
TTATATTTGCAGCATGCAAGAATTTATGCACCTTTGCATATTTTACACGG
ACCTGGAGGGGCTAACAAAGAAACATATCCAGGAATGAAACAAGTGGAGG
ATGGGCAATCATCGATTTTTGCATTTAAAGGTAGAAGCATTTTTATGCTT
GAAGCTATGGTATGCAAACCAGACCTTTCAGCCAAACTGTGATAATAATC
TTTAACAGTCGACAAGTTCAAGTCATTGACATTGTTATATGGCGTAAGTC
AGCCATTCCATAGATAGCAAGAGGTAAATTAATGCACACATTAGAGAACA
TGATCAATTCAAATATGCTGTCCGAGAGTCAAAATAATGTACACCTACAA
CGAGGAGATTTTCGTCACATCTGCTGAAGCCAAAGACTTGAAGACTGAAG
GTCAGCCCAAAATATTTCCAGCGGAAATTACTCAAAGCTTTTTGAAAATA
CTCAGAATACAGCAAGATGTTACTAGGTTTCCGAGCTCAATGTTCAGCTT
ACGAGGACGATTCTTGCTGTTACCATAATTGGCTATTATTTTTTTCAACT
TCTCTAGTCTGCTTAGAGTCATGTAAAATGACATAGAAAAAATTGCGACC
CAAATAAATAAAATGTCACATCGCGGAAAGAATACAAATCAGCACATCTT
CTACATCGCATGCTGTGAGTATAATGTAAAACACGTCTATGAAATAGACT
CTCACACCCCTGTAGTATGACCTAGAATTTATCTGTCAAAAAAAAAGAAA
AATGCACGCAAATTTTCCTGTTCTTGTCTATAATTCA back to topCoding sequence (CDS) from alignment at KK037247.1:376687..377923- >rna8022 ID=rna8022|Name=rna8022|organism=Nannochloropsis gaditana|type=CDS|length=198bp|location=Sequence derived from alignment at KK037247.1:376687..377923- (Nannochloropsis gaditana)
ATGCGCTTATATTTGCAGCATGCAAGAATTTATGCACCTTTGCATATTTT
ACACGGACCTGGAGGGGCTAACAAAGAAACATATCCAGGAATGAAACAAG
TGGAGGATGGGCAATCATCGATTTTTGCATTTAAAGGTAGAAGCATTTTT
ATGCTTGAAGCTATGGTATGCAAACCAGACCTTTCAGCCAAACTGTGA back to top
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