rna802, rna802 (mRNA) Nannochloropsis gaditana

Overview
Namerna802
Unique Namerna802
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length348
Alignment locationCM002456.1:450196..452193 -

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Properties
Property NameValue
Productadenosine deaminase
Orig transcript idgnl|cribi|Naga_100106g16.1438.mrna
Orig protein idgnl|cribi|Naga_100106g16.1438
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:450196..452193 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100106g16gene768Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna802rna802-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29864.1cds802Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna802 ID=rna802|Name=rna802|organism=Nannochloropsis gaditana|type=mRNA|length=348bp
ATGAAGCACCAAGCCAACACGATGATGCTGCGAATCGTCCAGGCCTTAAC
CTTGCTGATGGCCACCACCGCCTTCTTCGCCCCTCACGCCCCCTCTGCAG
GCATCAAGCGCGGTGGTCCCGTGTACAACGGGGATGTCGAGGTCATCTGG
CCTGGCAACAAGAAGGTGAAAGCTAAACCGGGGGAGGCCCTGAAGGCTGT
CGCCGCTAGAGCTCGTTACACGCCTAACTACGGATGTGAAGAGGGGAAAT
GCGGTTCATGTGAGCACAAAGGTAGCGATGGTAAGAAGTACCGCGTTTGC
ATCACGAAGGTGCCGAAAATCGCCGGCCCATTGACCTTGAAGCCCTAA
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protein sequence of rna802

>rna802-protein ID=rna802-protein|Name=rna802|organism=Nannochloropsis gaditana|type=polypeptide|length=584bp
MSEKQNFSPAPSRPCAFNGKKLATQENGDHNHVDDLPRRVNRVNDASSDL
ASACRRCRVFKGMGPNLVNFLTEIPKTDLHVHLDGSPRLSTLIELAQEHH
VDLPAYTEEGLRELVFRETYDSLVDYLRGFPLIVRVLQQPGALERIAYEF
AWDCLNEGVLYIEPRFAPQLLATATLDVIGVLTEATRGLERAKKEYNAQQ
SVRDGQKPSFDFGIICCAMRTFMTDVSEYYHAFCSLHQDEPQALVYQLAA
SALFHAAIKAKKDHGLPVVGVDIAGQEAGYPAAEFQAAFEVAHKNFLGVT
VHAGEAFGPEAVFQAITDLHCERLGHGYHLFSVDKVVKKERPAEFVAGLV
QYVAKRRIMLEVCLSSNRQTMTELRDDISKHALKDMLAHGICVSLCTDNR
LVSNTTVVNELLLAIEHFALTPTELKTMILEGFKRSFFPGSYLQKRKYVG
QVMNYYEHLERKYGLKDWYLSEDSMFEDQHRPQQPQTEAGRETGTPAREQ
GWEQEHENIDSTVGACLLHSSGDRIRSLSPQWTRAQALGEKMPEGGEALG
DAARGFHVDIPWERRRIVSVQTTVWTSHPSMMFI
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mRNA from alignment at CM002456.1:450196..452193-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna802 ID=rna802|Name=rna802|organism=Nannochloropsis gaditana|type=mRNA|length=1998bp|location=Sequence derived from alignment at CM002456.1:450196..452193- (Nannochloropsis gaditana)
ATGTCCGAAAAGCAGAACTTCTCCCCTGCACCCTCCCGACCGTGCGCATT TAATGGAAAGAAGTTGGCCACACAAGAGAATGGTGACCATAACCATGTAG ATGATTTGCCTAGGCGCGTGAACAGGGTGAATGATGCTTCGAGCGACCTA GCCTCCGCGTGCCGCCGGTGTCGTGTTTTCAAAGGGATGGGGCCCAATCT CGTAAATTTTCTAACCGAAATTCCAAAGACAGATCTCCACGTGCATCTTG ATGGTTCTCCTCGGCTAAGTACGTTGATAGAGCTTGCCCAAGAGCACCAT GTCGACCTTCCTGCCTATACCGAAGAGGGTTTGCGTGAATTAGTGTTCCG TGAAACGTACGACAGTTTGGTGGACTACCTACGAGGGTTCCCTCTCATTG TTCGCGTTCTGCAGCAACCTGGAGCGCTGGAGCGGATTGCCTACGAATTT GCTTGGGACTGTTTGAATGAAGGTGTCCTTTACATTGAGCCGCGTTTTGC GCCTCAGCTTCTGGCCACGGCGACATTGGACGTGATAGGAGTCTTGACGG AGGCAACGCGGGGATTGGAGAGGGCTAAGAAGGAATACAATGCCCAACAG TCGGTCAGGGATGGACAAAAACCTAGCTTTGATTTCGGCATAATATGCTG CGCCATGCGCACCTTTATGACGGACGTCTCGGAGTACTACCATGCATTCT GCTCCCTGCACCAGGATGAGCCTCAGGCGCTCGTCTACCAGCTTGCGGCC AGCGCTTTGTTTCACGCAGCCATCAAAGCCAAGAAGGACCATGGCCTGCC CGTCGTCGGGGTGGACATTGCCGGCCAAGAGGCCGGGTATCCCGCGGCGG AATTCCAAGCCGCTTTCGAGGTCGCGCACAAGAATTTTTTGGGGGTGACG GTGCACGCCGGAGAGGCCTTCGGTCCAGAAGCAGTCTTTCAGGCAATCAC AGATCTGCACTGTGAGAGGCTTGGCCACGGCTACCATTTGTTCTCGGTGG ACAAGGTGGTCAAGAAGGAGCGCCCGGCCGAATTTGTCGCGGGCCTGGTC CAGTACGTGGCAAAACGAAGGATCATGCTCGAGGTGTGTCTGAGCAGCAA CAGACAAACTATGTAGGTCCGAGGGGGGAAAGGTGATGTTCAAGGGCGGC CCAATTGAGGGACCTGTCATGCTGACCCCGAAGCGTGGGTGGATGGAAGA GCGTTGCACTCTCACTCGTGACGCCCGTGTTGCTACCGTTGTATGCTGCT TCATCATTTGATTTCCTATGTTAATCCATCTCACATCTAAGTCGATCCTT CTATGCAGGACCGAGCTCCGCGATGACATTTCCAAGCACGCGCTCAAGGA TATGCTCGCCCACGGGATCTGCGTCTCCCTCTGCACGGACAATCGACTGG TAAGCAATACCACGGTAGTCAATGAGCTCCTCCTCGCCATCGAGCACTTT GCACTTACACCTACCGAGCTGAAAACCATGATATTGGAGGGCTTCAAGCG CAGCTTCTTTCCAGGAAGCTACCTGCAGAAGAGAAAGTACGTCGGACAGG TCATGAACTACTACGAGCATTTGGAGCGGAAGTACGGCCTGAAAGACTGG TATCTCTCGGAGGACAGCATGTTCGAGGACCAACATCGCCCGCAGCAGCC GCAGACTGAGGCTGGACGCGAGACAGGTACGCCGGCACGCGAGCAAGGAT GGGAGCAGGAACACGAAAACATTGATTCGACCGTCGGCGCATGCCTTTTG CATTCCTCTGGCGACCGCATTCGATCCTTGAGTCCGCAATGGACACGGGC CCAGGCACTAGGAGAAAAGATGCCAGAGGGTGGGGAGGTAACAGATGATG GGAAGATGAACAGAGGTTTGCGTGAAGGCCGCAGGCGCTTGGAGATGCCG CCCGAGGTTTTCATGTAGACATTCCTTGGGAGCGGAGGAGGATAGTTAGT GTACAGACAACCGTGTGGACGAGCCATCCCTCGATGATGTTCATATAG
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Coding sequence (CDS) from alignment at CM002456.1:450196..452193-

>rna802 ID=rna802|Name=rna802|organism=Nannochloropsis gaditana|type=CDS|length=5265bp|location=Sequence derived from alignment at CM002456.1:450196..452193- (Nannochloropsis gaditana)
GCGCTTGGAGATGCCGCCCGAGGTTTTCATGTAGACATTCCTTGGGAGCG
GAGGAGGATAGTTAGTGTACAGACAACCGTGTGGACGAGCCATCCCTCGA
TGATGTTCATATAGGACCGAGCTCCGCGATGACATTTCCAAGCACGCGCT
CAAGGATATGCTCGCCCACGGGATCTGCGTCTCCCTCTGCACGGACAATC
GACTGGTAAGCAATACCACGGTAGTCAATGAGCTCCTCCTCGCCATCGAG
CACTTTGCACTTACACCTACCGAGCTGAAAACCATGATATTGGAGGGCTT
CAAGCGCAGCTTCTTTCCAGGAAGCTACCTGCAGAAGAGAAAGTACGTCG
GACAGGTCATGAACTACTACGAGCATTTGGAGCGGAAGTACGGCCTGAAA
GACTGGTATCTCTCGGAGGACAGCATGTTCGAGGACCAACATCGCCCGCA
GCAGCCGCAGACTGAGGCTGGACGCGAGACAGGTACGCCGGCACGCGAGC
AAGGATGGGAGCAGGAACACGAAAACATTGATTCGACCGTCGGCGCATGC
CTTTTGCATTCCTCTGGCGACCGCATTCGATCCTTGAGTCCGCAATGGAC
ACGGGCCCAGGCACTAGGAGAAAAGATGCCAGAGGGTGGGGAGATGTCCG
AAAAGCAGAACTTCTCCCCTGCACCCTCCCGACCGTGCGCATTTAATGGA
AAGAAGTTGGCCACACAAGAGAATGGTGACCATAACCATGTAGATGATTT
GCCTAGGCGCGTGAACAGGGTGAATGATGCTTCGAGCGACCTAGCCTCCG
CGTGCCGCCGGTGTCGTGTTTTCAAAGGGATGGGGCCCAATCTCGTAAAT
TTTCTAACCGAAATTCCAAAGACAGATCTCCACGTGCATCTTGATGGTTC
TCCTCGGCTAAGTACGTTGATAGAGCTTGCCCAAGAGCACCATGTCGACC
TTCCTGCCTATACCGAAGAGGGTTTGCGTGAATTAGTGTTCCGTGAAACG
TACGACAGTTTGGTGGACTACCTACGAGGGTTCCCTCTCATTGTTCGCGT
TCTGCAGCAACCTGGAGCGCTGGAGCGGATTGCCTACGAATTTGCTTGGG
ACTGTTTGAATGAAGGTGTCCTTTACATTGAGCCGCGTTTTGCGCCTCAG
CTTCTGGCCACGGCGACATTGGACGTGATAGGAGTCTTGACGGAGGCAAC
GCGGGGATTGGAGAGGGCTAAGAAGGAATACAATGCCCAACAGTCGGTCA
GGGATGGACAAAAACCTAGCTTTGATTTCGGCATAATATGCTGCGCCATG
CGCACCTTTATGACGGACGTCTCGGAGTACTACCATGCATTCTGCTCCCT
GCACCAGGATGAGCCTCAGGCGCTCGTCTACCAGCTTGCGGCCAGCGCTT
TGTTTCACGCAGCCATCAAAGCCAAGAAGGACCATGGCCTGCCCGTCGTC
GGGGTGGACATTGCCGGCCAAGAGGCCGGGTATCCCGCGGCGGAATTCCA
AGCCGCTTTCGAGGTCGCGCACAAGAATTTTTTGGGGGTGACGGTGCACG
CCGGAGAGGCCTTCGGTCCAGAAGCAGTCTTTCAGGCAATCACAGATCTG
CACTGTGAGAGGCTTGGCCACGGCTACCATTTGTTCTCGGTGGACAAGGT
GGTCAAGAAGGAGCGCCCGGCCGAATTTGTCGCGGGCCTGGTCCAGTACG
TGGCAAAACGAAGGATCATGCTCGAGGTGTGTCTGAGCAGCAACAGACAA
ACTATGCGCTTGGAGATGCCGCCCGAGGTTTTCATGTAGACATTCCTTGG
GAGCGGAGGAGGATAGTTAGTGTACAGACAACCGTGTGGACGAGCCATCC
CTCGATGATGTTCATATAGGACCGAGCTCCGCGATGACATTTCCAAGCAC
GCGCTCAAGGATATGCTCGCCCACGGGATCTGCGTCTCCCTCTGCACGGA
CAATCGACTGGTAAGCAATACCACGGTAGTCAATGAGCTCCTCCTCGCCA
TCGAGCACTTTGCACTTACACCTACCGAGCTGAAAACCATGATATTGGAG
GGCTTCAAGCGCAGCTTCTTTCCAGGAAGCTACCTGCAGAAGAGAAAGTA
CGTCGGACAGGTCATGAACTACTACGAGCATTTGGAGCGGAAGTACGGCC
TGAAAGACTGGTATCTCTCGGAGGACAGCATGTTCGAGGACCAACATCGC
CCGCAGCAGCCGCAGACTGAGGCTGGACGCGAGACAGGTACGCCGGCACG
CGAGCAAGGATGGGAGCAGGAACACGAAAACATTGATTCGACCGTCGGCG
CATGCCTTTTGCATTCCTCTGGCGACCGCATTCGATCCTTGAGTCCGCAA
TGGACACGGGCCCAGGCACTAGGAGAAAAGATGCCAGAGGGTGGGGAGAT
GTCCGAAAAGCAGAACTTCTCCCCTGCACCCTCCCGACCGTGCGCATTTA
ATGGAAAGAAGTTGGCCACACAAGAGAATGGTGACCATAACCATGTAGAT
GATTTGCCTAGGCGCGTGAACAGGGTGAATGATGCTTCGAGCGACCTAGC
CTCCGCGTGCCGCCGGTGTCGTGTTTTCAAAGGGATGGGGCCCAATCTCG
TAAATTTTCTAACCGAAATTCCAAAGACAGATCTCCACGTGCATCTTGAT
GGTTCTCCTCGGCTAAGTACGTTGATAGAGCTTGCCCAAGAGCACCATGT
CGACCTTCCTGCCTATACCGAAGAGGGTTTGCGTGAATTAGTGTTCCGTG
AAACGTACGACAGTTTGGTGGACTACCTACGAGGGTTCCCTCTCATTGTT
CGCGTTCTGCAGCAACCTGGAGCGCTGGAGCGGATTGCCTACGAATTTGC
TTGGGACTGTTTGAATGAAGGTGTCCTTTACATTGAGCCGCGTTTTGCGC
CTCAGCTTCTGGCCACGGCGACATTGGACGTGATAGGAGTCTTGACGGAG
GCAACGCGGGGATTGGAGAGGGCTAAGAAGGAATACAATGCCCAACAGTC
GGTCAGGGATGGACAAAAACCTAGCTTTGATTTCGGCATAATATGCTGCG
CCATGCGCACCTTTATGACGGACGTCTCGGAGTACTACCATGCATTCTGC
TCCCTGCACCAGGATGAGCCTCAGGCGCTCGTCTACCAGCTTGCGGCCAG
CGCTTTGTTTCACGCAGCCATCAAAGCCAAGAAGGACCATGGCCTGCCCG
TCGTCGGGGTGGACATTGCCGGCCAAGAGGCCGGGTATCCCGCGGCGGAA
TTCCAAGCCGCTTTCGAGGTCGCGCACAAGAATTTTTTGGGGGTGACGGT
GCACGCCGGAGAGGCCTTCGGTCCAGAAGCAGTCTTTCAGGCAATCACAG
ATCTGCACTGTGAGAGGCTTGGCCACGGCTACCATTTGTTCTCGGTGGAC
AAGGTGGTCAAGAAGGAGCGCCCGGCCGAATTTGTCGCGGGCCTGGTCCA
GTACGTGGCAAAACGAAGGATCATGCTCGAGGTGTGTCTGAGCAGCAACA
GACAAACTATGCGCTTGGAGATGCCGCCCGAGGTTTTCATGTAGACATTC
CTTGGGAGCGGAGGAGGATAGTTAGTGTACAGACAACCGTGTGGACGAGC
CATCCCTCGATGATGTTCATATAGGACCGAGCTCCGCGATGACATTTCCA
AGCACGCGCTCAAGGATATGCTCGCCCACGGGATCTGCGTCTCCCTCTGC
ACGGACAATCGACTGGTAAGCAATACCACGGTAGTCAATGAGCTCCTCCT
CGCCATCGAGCACTTTGCACTTACACCTACCGAGCTGAAAACCATGATAT
TGGAGGGCTTCAAGCGCAGCTTCTTTCCAGGAAGCTACCTGCAGAAGAGA
AAGTACGTCGGACAGGTCATGAACTACTACGAGCATTTGGAGCGGAAGTA
CGGCCTGAAAGACTGGTATCTCTCGGAGGACAGCATGTTCGAGGACCAAC
ATCGCCCGCAGCAGCCGCAGACTGAGGCTGGACGCGAGACAGGTACGCCG
GCACGCGAGCAAGGATGGGAGCAGGAACACGAAAACATTGATTCGACCGT
CGGCGCATGCCTTTTGCATTCCTCTGGCGACCGCATTCGATCCTTGAGTC
CGCAATGGACACGGGCCCAGGCACTAGGAGAAAAGATGCCAGAGGGTGGG
GAGATGTCCGAAAAGCAGAACTTCTCCCCTGCACCCTCCCGACCGTGCGC
ATTTAATGGAAAGAAGTTGGCCACACAAGAGAATGGTGACCATAACCATG
TAGATGATTTGCCTAGGCGCGTGAACAGGGTGAATGATGCTTCGAGCGAC
CTAGCCTCCGCGTGCCGCCGGTGTCGTGTTTTCAAAGGGATGGGGCCCAA
TCTCGTAAATTTTCTAACCGAAATTCCAAAGACAGATCTCCACGTGCATC
TTGATGGTTCTCCTCGGCTAAGTACGTTGATAGAGCTTGCCCAAGAGCAC
CATGTCGACCTTCCTGCCTATACCGAAGAGGGTTTGCGTGAATTAGTGTT
CCGTGAAACGTACGACAGTTTGGTGGACTACCTACGAGGGTTCCCTCTCA
TTGTTCGCGTTCTGCAGCAACCTGGAGCGCTGGAGCGGATTGCCTACGAA
TTTGCTTGGGACTGTTTGAATGAAGGTGTCCTTTACATTGAGCCGCGTTT
TGCGCCTCAGCTTCTGGCCACGGCGACATTGGACGTGATAGGAGTCTTGA
CGGAGGCAACGCGGGGATTGGAGAGGGCTAAGAAGGAATACAATGCCCAA
CAGTCGGTCAGGGATGGACAAAAACCTAGCTTTGATTTCGGCATAATATG
CTGCGCCATGCGCACCTTTATGACGGACGTCTCGGAGTACTACCATGCAT
TCTGCTCCCTGCACCAGGATGAGCCTCAGGCGCTCGTCTACCAGCTTGCG
GCCAGCGCTTTGTTTCACGCAGCCATCAAAGCCAAGAAGGACCATGGCCT
GCCCGTCGTCGGGGTGGACATTGCCGGCCAAGAGGCCGGGTATCCCGCGG
CGGAATTCCAAGCCGCTTTCGAGGTCGCGCACAAGAATTTTTTGGGGGTG
ACGGTGCACGCCGGAGAGGCCTTCGGTCCAGAAGCAGTCTTTCAGGCAAT
CACAGATCTGCACTGTGAGAGGCTTGGCCACGGCTACCATTTGTTCTCGG
TGGACAAGGTGGTCAAGAAGGAGCGCCCGGCCGAATTTGTCGCGGGCCTG
GTCCAGTACGTGGCAAAACGAAGGATCATGCTCGAGGTGTGTCTGAGCAG
CAACAGACAAACTAT
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Synonyms
Publications