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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100023g1.3937.mrna |
| Orig protein id | gnl|cribi|Naga_100023g1.3937 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:356473..358359 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8016 ID=rna8016|Name=rna8016|organism=Nannochloropsis gaditana|type=mRNA|length=961bp
TGCTCCTGACAGCAATAAATACATGAAGCGTCTGCCAAAGCATTTGAACT
GGTGCCCCCGTAATACACGTGGACAGCTAAGAAATGTTCAAATTGGTACA
TCATGGTGATACTGATTGATAATGCGCCTTGACAGTACATGGGACCGTAA
TCCAATCCTTTTCTGTTATATGTTTTCAAAATGTACCTGTGTGCGTCTCA
ACTTTATCCTCTTGAGTTTGTCAGAGACAAATCCCGATAGGAGGCACATT
CACTAGTTCAGTCGGATCTATCGAAAGAAGTCCACGTATCCTGCAGGTGC
TATTTCATCTGGTTCAAGGGCTCAACGGACAATTGGAAATGTTATGTCTA
CCTTCTATTTACACATCTTGAGGTTTTACATCTCCCGCCACCACAGTTGT
TCCATTTGCTAGCTTATCTGTCTTTGAAGGCCATTCGCTAAGCTCTCGCA
CCGCAAAGGAGGGGGCTATTCCACTTCACCGCATCATAGAATCCTCTTTT
GACAACGCCCACTGCTGCAGTGTACGCTCGACAATCGTCGGTAAAATGTC
TGCCGCGAAAATTCCGGCTTTTCTGTCAGCTTCCAGCTTTGCCGTAGTAG
GGGCTAGTACAAACCGAGAGAAGTTCGGGAATAAAGTCCTACGTTGCTAT
ATCCAGCATGGCAAAAGCATTACACCCATCAATCCAAAAGAGAGGATGAT
TGAAGGCATTGCCGCTCTCGCCAACTTATCCTCCCTACCGAACCCTACCA
ATACGGCTGTATCTGTTGTTACACCCCCAATAGTCACCGTCGACATACTC
GAAGAGGCAGCAAGACTTGGAATCAAACATATCTGGCTTCAGCCAGGGTG
TGAAAGTCCGGAAGTCATGGCGGCGGCAGCGAGGTTTGGTTTGCTTCCGA
CGCTGATCAGCGGGGGGCCTTGCGTTTTGGTGGAGCTTGGCTTCGATGAT
CATAGGTGACT back to topprotein sequence of rna8016 >rna8016-protein ID=rna8016-protein|Name=rna8016|organism=Nannochloropsis gaditana|type=polypeptide|length=355bp
MSTILDGQCASGLEVLWVAMHGFVFTFVLLTAGMDLLNAAAMTALVAGGG
MYLVVLSEIGAHSMVYEWLPLVVTVVAVSLLSMGGARYAKGQVFAPPSTT
SGTGPVLFLSVLGGYVLATFQTQALRASGLEDWIPLMAIGVVCALMAYGG
VRYARNEDFLPTSLTRGSGPRISLMALGLFVGTSFLRKLEGYKGTWGSWL
ALGGAAAGSALLASGGARYSLGGSFLPGTVASGPAPVAVMALLGALVYTA
FVERLSLRASGQGAEQWWPLAGVVLGVGALSHAGARMGADSTLPTGLKQG
WTSPLAMLGLALYSALALHAVEDAKGGLTMWLNVAGAASLAGGVALVGKR
KLAPV back to topmRNA from alignment at KK037247.1:356473..358359+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8016 ID=rna8016|Name=rna8016|organism=Nannochloropsis gaditana|type=mRNA|length=1887bp|location=Sequence derived from alignment at KK037247.1:356473..358359+ (Nannochloropsis gaditana)
AAGGCATCTGAAGCCAGAAATTAATTAGAGCAGCCTCTGAGTTTTAGTTT
TGAGCCATAGAATCTAGGCATCAAAAAGGATTCACCTCCCTCACGAGCCA
GCAGGCCCTTGCGTCTGAGCAGAAGACATCCTTCGCCAGGTAGGAGGTTA
GATGTTCACTATCTGAGGTTGCAAGGTGACAAACGCGACTACGTTTGCTG
GCGAGCTTGTGATATATCTCGTGTCGCAAATGACAAGCATGTCAAGAGGA
CTTTGTACGGCAAGATAAAAGATTTTGAATGAACACATGATTATAACATT
ATTTTGACTGTTGATACACACTTCTCGGTGCCCCAACAGGATGGTTCTCT
TCGTATGCCTTCCTCTGACCAAGTTTTCAAAGTTTTGAAGAACAAATGTG
CCTCATTACCTCTTGAATGGCATATGGTTAAATCTTAGATTCAAATAGAT
gtgcccttcttcttttgcgTCAATTGCTTCGTAGAGCCAGAAGAAACAAG
CACCAAAGCTGTCGCGATGGGCGTTTCCGTCTTTCTGAGCTTTATCTCCG
TATCCCCCCTCACATCTCAGGTGTATTTATCATGAGCACGATACTAGATG
GTCAATGTGCATCGGGTTTAGAAGTGTTATGGGTGGCTATGCACGGTTTT
GTCTTCACCTTTGTCTTGCTGACGGCGGGGATGGATCTATTGAACGCTGC
TGCCATGACGGCTCTAGTTGCTGGCGGTGGCATGTACTTGGTGGTCCTTT
CGGAGATAGGAGCGCACAGTATGGTGTACGAATGGCTACCGCTCGTCGTT
ACCGTTGTCGCCGTAAGTCTCCTGTCGATGGGAGGTGCACGGTATGCCAA
GGGGCAGGTTTTCGCGCCGCCAAGCACCACCTCCGGGACAGGccctgtcc
tctttctctccgtGTTAGGAGGCTATGTCCTGGCGACTTTCCAAACACAG
GCCCTGCGGGCATCGGGATTAGAGGATTGGATACCTCTCATGGCCATAGG
GGTCGTTTGCGCTTTGATGGCTTACGGGGGCGTGCGCTACGCCCGAAACG
AGGACTTCCTCCCCACGTCGCTAACAAGGGGCTCAGGGCCTCGGATCTCA
CTCATGGCCCTGGGTCTTTTTGTTGGAACCTCCTTTCTGAGGAAGCTGGA
GGGGTACAAAGGCACGTGGGGTAGCTGGCTGGCATTGGGGGGAGCAGCGG
CGGGCTCGGCGCTGCTGGCTTCCGGCGGTGCTCGCTACTCCCTAGGCGGA
AGCTTTCTGCCCGGGACAGTGGCCTCCGGACCTGCGCCCGTGGCAGTAAT
GGCGTTGCTGGGAGCACTCGTTTACACTGCTTTCGTGGAGCGCCTGAGTT
TGCGAGCTTCCGGACAGGGTGCGGAGCAGTGGTGGCCGCTGGCGGGCGTA
GTTTTGGGCGTGGGGGCCCTATCGCATGCCGGGGCCAGGATGGGGGCGGA
CAGTACGCTGCCGACGGGCCTTAAGCAGGGGTGGACCTCGCCCCTGGCCA
TGCTAGGCTTGGCTCTTTACTCGGCGCTGGCTCTGCACGCTGTGGAGGAT
GCCAAGGGCGGCCTGACAATGTGGTTGAATGTGGCGGGCGCTGCGTCCtt
ggcggggggggtggcGCTCGTCGGGAAGAGAAAGCTGGCGCCAGTCTGAG
CTGCTAAGGTGGTCGGGATAACGTGTTGACTGTAGGTATGTGTAAGTCTg
agcggagaagaggagacggtATTGCGTGTCCACTGTTTGTACTAGGGAGG
GAATTGAGGAGTCTGGGGAGACAATCGTGCTAGCGGAGTTACAGCACCAC
CCGGACACAGCAAGACGAGATGAGAGGCATAAAACAtattttttgaaaaa
aacaaGGTAACCTCTTTCCTGAGACATGGTACGCGAT back to topCoding sequence (CDS) from alignment at KK037247.1:356473..358359+ >rna8016 ID=rna8016|Name=rna8016|organism=Nannochloropsis gaditana|type=CDS|length=1068bp|location=Sequence derived from alignment at KK037247.1:356473..358359+ (Nannochloropsis gaditana)
ATGAGCACGATACTAGATGGTCAATGTGCATCGGGTTTAGAAGTGTTATG
GGTGGCTATGCACGGTTTTGTCTTCACCTTTGTCTTGCTGACGGCGGGGA
TGGATCTATTGAACGCTGCTGCCATGACGGCTCTAGTTGCTGGCGGTGGC
ATGTACTTGGTGGTCCTTTCGGAGATAGGAGCGCACAGTATGGTGTACGA
ATGGCTACCGCTCGTCGTTACCGTTGTCGCCGTAAGTCTCCTGTCGATGG
GAGGTGCACGGTATGCCAAGGGGCAGGTTTTCGCGCCGCCAAGCACCACC
TCCGGGACAGGccctgtcctctttctctccgtGTTAGGAGGCTATGTCCT
GGCGACTTTCCAAACACAGGCCCTGCGGGCATCGGGATTAGAGGATTGGA
TACCTCTCATGGCCATAGGGGTCGTTTGCGCTTTGATGGCTTACGGGGGC
GTGCGCTACGCCCGAAACGAGGACTTCCTCCCCACGTCGCTAACAAGGGG
CTCAGGGCCTCGGATCTCACTCATGGCCCTGGGTCTTTTTGTTGGAACCT
CCTTTCTGAGGAAGCTGGAGGGGTACAAAGGCACGTGGGGTAGCTGGCTG
GCATTGGGGGGAGCAGCGGCGGGCTCGGCGCTGCTGGCTTCCGGCGGTGC
TCGCTACTCCCTAGGCGGAAGCTTTCTGCCCGGGACAGTGGCCTCCGGAC
CTGCGCCCGTGGCAGTAATGGCGTTGCTGGGAGCACTCGTTTACACTGCT
TTCGTGGAGCGCCTGAGTTTGCGAGCTTCCGGACAGGGTGCGGAGCAGTG
GTGGCCGCTGGCGGGCGTAGTTTTGGGCGTGGGGGCCCTATCGCATGCCG
GGGCCAGGATGGGGGCGGACAGTACGCTGCCGACGGGCCTTAAGCAGGGG
TGGACCTCGCCCCTGGCCATGCTAGGCTTGGCTCTTTACTCGGCGCTGGC
TCTGCACGCTGTGGAGGATGCCAAGGGCGGCCTGACAATGTGGTTGAATG
TGGCGGGCGCTGCGTCCttggcggggggggtggcGCTCGTCGGGAAGAGA
AAGCTGGCGCCAGTCTGA back to top
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