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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100218g9.5296.mrna |
| Orig protein id | gnl|cribi|Naga_100218g9.5296 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:348115..349506 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8012 ID=rna8012|Name=rna8012|organism=Nannochloropsis gaditana|type=mRNA|length=951bp
ATGCGTTTAAGAGACTGGGCGTGGCCTGTGGGCATCATTGCCACACTTTG
GGGGGCATCGCATCTAGTCTTACGGCGTGCCTACCCTGCTCCACCTCCTG
GTAATCAAGCCATCATCGTGATCTCAGGCGCCTCCACGGGCATTGGGCGT
CACGCTGCAGAGTATCTTGCGCGTCTAGGTTTCACTGTCCTCGCCGGAGT
GCGAAGGGAAGCCGACATGGAGGACTTACGGAGCGCTCACTTGCCGTCCC
TTCACCCCATCATCCTTGACGTCACCAACGCCTCGGACGTGCGAGCGGCC
GTCGAACGCGCCGAAGCCCTCGCGCCATTGCCCGTGTGGGGACTGGTGAA
TAACGCTGGACTCGGGTACCCTATTCCGGTAGAACTGGCAGACATGGAGA
AGGCGCGGAAGCTCTTCGAGGTGAATGTGCTTGCCGTGATCGGGATGGCT
CAGGCCTTCGTCCCCCTGCTTCGGAGGGCGCCAGGTGGGCGGATAGTGAA
TGTGGGCTCAGCAACTGGAACTATGGCGACGCAGGGCGACGGCATCTACG
CCTCTTCGAAGCACGCTGTGGAAGGTCTGACGGACAGCATGCGCTTGGAG
CTCGCAGCTTGGGAGATGTCCGTGTCCCTCGTCGTACCCGGTCAGGTCCA
GAGCGGCATGTGGGGCAAACTCACGGGTCAGAACGCTCCGGCAATAAACG
ACTTGAGCGCAGATCAATACGCACTATACAAACCACTTTTCCTGCAGGTA
GAGAAGGCCGTCTCGGGATTTATACCCAAACTTTCTCCAGCCTCTGTCAC
TTCACAAGCAATCGCCCATGCGCTCATGAGTCCTCAGCCCAAGACACGAT
ACCTGGTCGCCAGCGTAAATGGAGTGCCTTTATGGCTACTTCGTGGTTTG
TGCGGACTCCTGCCAGATCGAGTGGTCGATTTTGTTAAATTGCGCTTATA
G back to topprotein sequence of rna8012 >rna8012-protein ID=rna8012-protein|Name=rna8012|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
MLDASLYVFRHCATPKQAVIIIQIMEDVATNNLLPPLRLLPGLQLCRGIK
ISMLSVNNILQLYREILMAISQSEENQARNICRAIARGLRGWEETRNNSL
TLFEGLANAIIASGYLRGFGKYSGETESSNDARWLPGEEGLHVRVDIKLW
LQRLKDHHRLQVQLRKMNEYVSNLRESLLTVRSCPEPVRDVFKETINISY
LQELLEEVVEALDAEGRLCEQILSQNGQTTAYKSQVVYSSAWAARPLLHD
HRQRALKDLLELVLQDKKGV back to topmRNA from alignment at KK037247.1:348115..349506+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8012 ID=rna8012|Name=rna8012|organism=Nannochloropsis gaditana|type=mRNA|length=1392bp|location=Sequence derived from alignment at KK037247.1:348115..349506+ (Nannochloropsis gaditana)
CCGTAAGACTAGATGCGATGCCCCCCAAAGTGTGGCAATGATGCCCACAG
GCCACGCCCAGTCTCTTAAACGCATGCTGCACCGGTTGATGCAAACTACC
AGTAGGGAAAAGCACTCTTGCGCAGAATCTGCGGCGAATTTGAAAATGGA
AGTGTCTGACTGTAAATGCTGGACGCATCATTGTACGTATTTCGACATTG
TGCGACACCCAAGCAGGCTGTGATAATAATACAAATAATGGAAGACGTTG
CGACaaataacctcctgccccccctgaGGCTCCTTCCTGGTTTGCAACTT
TGCCGCGGAATCAAAATTTCCATGCTATCTGTTAATAATATCCTCCAACT
ATACAGGGAAATTTTAATGGCTATTTCGCAATCTGAAGAGAATCAAGCGC
GGAATATTTGCCGAGCCATAGCCCGCGGGCTGCGGGGCTGGGAAGGTGAG
TTCCGGGGAGTGAGCAAGCCTCTGGCTCAGAACATAGACTATCCGCATTG
CTAATCAGCCATTCCTTTATGATAGAGACCCGCAATAACTCACTGACATT
ATTTGAGGGGCTAGCCAACGCCATCATAGCCAGTGGATACCTTAGAGGAT
TTGGAAAGTATTCCGGCGAGACAGAGTCATCGAATGATGCCCGCTGGCTC
CCCGGGGAAGAGGGCTTGCACGTTCGGGTGGATATAAAGCTTTGGTTGCA
GAGATTGAAGGATCATcaccgcctccaggtccagctACGGAAGATGAATG
AGTACGTGAGCAACCTTCGGGAGTCACTTCTGACTGTTCGATCTTGCCCC
GAGCCTGTCCGCGACGTGTTCAAGGAGACTATAAACATTTCGTACCTTCA
AGAGCTATTGGAAGAAGTAGTCGAAGCTCTTGATGCAGAAGGGAGGCTTT
GTGAACAAATTTTAAGTCAAAATGGACAGACCACTGCGTATAAATCGCAG
GTCGTGTACTCCAGCGCATGGGCGGCGCGGCCTCTTTTGCATGACCATCG
TCAGAGAGCCTTGAAGGACCTTCTCGAGCTCGTTCTCCAAGACAAGAAAG
GAGTTTGATACTTGGAGCATAAATATAGGCATATGGACATATTTGTCGGT
AGATACGATAGCCAACATTGTACGAAATGGGGGCAGCAAAAGCTGTGGAT
CATGATATTATCTCCATGCTACATGTAAGTCTGATGGCTCTCAGTGAAAT
CAGTCACAAAGCAACTTTCAACACAAGcttctttttattttttacTCGAT
ATCGCCTCCAGTAGATGGCGGTTTGTTGACAGATTTCTTTTTCACATGTT
TAGCTAAACACGCGCCTTCCTGCCGATCGCCTACTGTTACATGCTACACG
CGCCACCTTTACCCACGCTAGCTAGTCCTCAGCGCGCCCACC back to topCoding sequence (CDS) from alignment at KK037247.1:348115..349506+ >rna8012 ID=rna8012|Name=rna8012|organism=Nannochloropsis gaditana|type=CDS|length=1626bp|location=Sequence derived from alignment at KK037247.1:348115..349506+ (Nannochloropsis gaditana)
ATGCTGGACGCATCATTGTACGTATTTCGACATTGTGCGACACCCAAGCA
GGCTGTGATAATAATACAAATAATGGAAGACGTTGCGACaaataacctcc
tgccccccctgaGGCTCCTTCCTGGTTTGCAACTTTGCCGCGGAATCAAA
ATTTCCATGCTATCTGTTAATAATATCCTCCAACTATACAGGGAAATTTT
AATGGCTATTTCGCAATCTGAAGAGAATCAAGCGCGGAATATTTGCCGAG
CCATAGCCCGCGGGCTGCGGGGCTGGGAAGAGACCCGCAATAACTCACTG
ACATTATTTGAGGGGCTAGCCAACGCCATCATAGCCAGTGGATACCTTAG
AGGATTTGGAAAGTATTCCGGCGAGACAGAGTCATCGAATGATGCCCGCT
GGCTCCCCGGGGAAGAGGGCTTGCACGTTCGGGTGGATATAAAGCTTTGG
TTGCAGAGATTGAAGGATCATcaccgcctccaggtccagctACGGAAGAT
GAATGAGTACGTGAGCAACCTTCGGGAGTCACTTCTGACTGTTCGATCTT
GCCCCGAGCCTGTCCGCGACGTGTTCAAGGAGACTATAAACATTTCGTAC
CTTCAAGAGCTATTGGAAGAAGTAGTCGAAGCTCTTGATGCAGAAGGGAG
GCTTTGTGAACAAATTTTAAGTCAAAATGGACAGACCACTGCGTATAAAT
CGCAGGTCGTGTACTCCAGCGCATGGGCGGCGCGGCCTCTTTTGCATGAC
CATCGTCAGAGAGCCTTGAAGGACCTTCTCGAGCTCGTTCTCCAAGACAA
GAAAGGAGTTTGAATGCTGGACGCATCATTGTACGTATTTCGACATTGTG
CGACACCCAAGCAGGCTGTGATAATAATACAAATAATGGAAGACGTTGCG
ACaaataacctcctgccccccctgaGGCTCCTTCCTGGTTTGCAACTTTG
CCGCGGAATCAAAATTTCCATGCTATCTGTTAATAATATCCTCCAACTAT
ACAGGGAAATTTTAATGGCTATTTCGCAATCTGAAGAGAATCAAGCGCGG
AATATTTGCCGAGCCATAGCCCGCGGGCTGCGGGGCTGGGAAGAGACCCG
CAATAACTCACTGACATTATTTGAGGGGCTAGCCAACGCCATCATAGCCA
GTGGATACCTTAGAGGATTTGGAAAGTATTCCGGCGAGACAGAGTCATCG
AATGATGCCCGCTGGCTCCCCGGGGAAGAGGGCTTGCACGTTCGGGTGGA
TATAAAGCTTTGGTTGCAGAGATTGAAGGATCATcaccgcctccaggtcc
agctACGGAAGATGAATGAGTACGTGAGCAACCTTCGGGAGTCACTTCTG
ACTGTTCGATCTTGCCCCGAGCCTGTCCGCGACGTGTTCAAGGAGACTAT
AAACATTTCGTACCTTCAAGAGCTATTGGAAGAAGTAGTCGAAGCTCTTG
ATGCAGAAGGGAGGCTTTGTGAACAAATTTTAAGTCAAAATGGACAGACC
ACTGCGTATAAATCGCAGGTCGTGTACTCCAGCGCATGGGCGGCGCGGCC
TCTTTTGCATGACCATCGTCAGAGAGCCTTGAAGGACCTTCTCGAGCTCG
TTCTCCAAGACAAGAAAGGAGTTTGA back to top
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