rna8009, rna8009 (mRNA) Nannochloropsis gaditana

Overview
Namerna8009
Unique Namerna8009
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2945
Alignment locationKK037247.1:342655..346374 -

Link to JBrowse

Properties
Property NameValue
Productinositol-pentakisphosphate 2-kinase-like protein
Orig transcript idgnl|cribi|Naga_100218g7.5302.mrna
Orig protein idgnl|cribi|Naga_100218g7.5302
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:342655..346374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100218g7gene7755Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22690.1cds7987Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8009rna8009-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8009 ID=rna8009|Name=rna8009|organism=Nannochloropsis gaditana|type=mRNA|length=2945bp
TGGTCGATACCAGAAGGCTTCCATCACTCACCTTCCGATAGCCGTCATGA
TCCTGTAAAGACAGGCATTGGAGCGACATGCGGAGGATCCTGATGGTCGG
AGGTGTTTGCATTCTCTCGCGAGGACCTCGACGGCTTTCGTTTCGCCCAG
GCGGGCTCGGACATCGAGGCGTGAGGGGGCCGCCTCCTTCTCACGGCTTG
CGCAGCGCTCGAAGGAATGGAGTCACGGACGCCTTTGAGGATGTTTGCAG
AGATGGGATGAGCATTTATCCCTCCCTTTCAACCGAACATGAGCATAATG
TTCACCGACCCCGTTCCACTCGAGCCTCCCCGCAGCCTCCTCCGTCCCTG
TCCTCGCTGGAATGGCTCTCATCCAAGGATAAATGTCGGGTCGATCTCGG
CTTCAAAATGCTCAAAGCATGTACAGGCAATTTGAAGGTACAACGGAAAA
TGCTCGTGGACTTGATGCAGCGTTGCCATTCCGAGGGCTTGCATATGGGG
GTGCTGCGGACGTTCAAGGAACTCTGCTCCTCCGGACAGGAAAGTGGCAT
CTTCTTGCCCCAGCACGACGTGCCGCCAGCACATAAGGCGTCGTTGTACG
GGCCCATACTACCCGCGGAGTTGACGATGGCGCTACAGGCGGGCATGGCA
TGCAAGCATTGGGTGAAACTCGAGCGCGCCGTGGTCGGCTTCGGGGCGTC
CCTCCCTCGCGAGGAGGGGACGGGTAGGTGCATGACGGAGACTCTGGGAG
CCAACTGGTGGGAAAGCGTGGCTGCGGCGCTGCCCGAGGAGGATGGCTGG
AAGGCGCTGTACCCGCTGTACCTGGAGACACGGAAGCGGGGCCTGGGGAC
GGGGGGGGAAGAAGGCTTGAGGAGGAGAGTGCTGCAGAGCCTTGAGGCAG
CGGCCTCGATGCCTGTCCGAGGAGACGAAGGGGGTGACAGCGAAAGCGAC
ACCCGTTTGGTCGAGCTGATTTCGTCGGCATCCAGCAGCATGGAGGAGCT
CCTCCTCCAGACCTTGTCCTCCTCCTCCGCAGCTCCGCGGGCCTGGCTGG
AGCTCGAGCGCGCGTTGCAAGGAGAAGCGCGGGGAAAAGGGAAGGGGGAG
GGAGGGGCGAGAAAGCCCTCCCCCGCAGACTTTGATCAAGCCATAACTCG
GCTGGCCCGAGGCGGGATGGCGGACCATGCAAACAGCTTGCTCCGACGCC
TCACCCTCTTGGGGGGGCTGCCTATGGCCTCCTCCTACGCCGCGGTGGCA
ACCGCCTACGCCCGACAAGTGCGTCGAGCCGGAGCTCGGCACGTGCTGCA
AGAGATGCGTGGATTGAGTGAGAAAGGATGCCTGGCCGAAACGGAGGTGG
CGGCCGCGGAGGAGGCCTGTGCGGAGTTGGCGAGGGCTGGAAGGGACGGC
GCGGGGGGAGAGGGAGGGCGGTCTGCGCCTTCACGGGGAGAGGACGCGCG
GGGCGGGGGTCAAGAGCGTTGTGAGGGTGGTGAACGGGGGAGGAGGGAGG
CGGCGGGGGGCGAAAGGCTGACGGTGGCGGCGGCGGGAGGGACGCCTCAG
GCCTCGTCCACTGAGAGCCGAAGCCTGAGGCGACTGGCGAGGGCGGGGCG
GGGACCCGAGGCGCTGGAGGCCTTGCGGACGATGCAGGCGCGGGGCCTGG
TGCCCAACGTGTGGTGCTACAACTACTCCCTGATGGCCTGCGCGCGCAGC
GGACTCTTGAAGGAGGCGCAGGGGCTGCTTGAAGAGATGCCCGCGGCGGA
GAGGTCTGTCTATAGCCACTCTCTGCTGATCCACGCGGCCGAGAAAGCGG
GAGACTGGAGGGCGGCACAAGGCGTCTTGGAACGGATGAGGTGCAGAGGC
CTGGTGCCGTCCGTGGCATGCTACGGGTCCACAATGAACGCGCTGGGCAA
GGCCGGGAGGGCGGAGGAGGCGCTTGCCCTCTTGCGGCGCATGGGCACCG
GGGGTGAACCTCGTCCGAACGCCGTCGCCTACACCACCGCCATAGACGCC
TGTGCTCGCCGGTCCCTGGCCTCCGAGGCCCTCGGGCTCCTCCGGGAGAT
GGAGGAGGAGCGGGGGCTCGCCCCCAACGCCGTGGCCTACGCCTGCGCCA
TGAATGCTTGCGCCAAGGACAGGCGGGGGCTGGAAGCCCTGCGCCTCCTG
AGAGAGATGCAGGCCAAAGGCTTAGCGGCGACAGAGGCGCACTACGGAGC
CGTCTTGAACGCGCTGAACCTGAGCGAGGAGGACGACGCCTCCCTGCTCG
CTCTCTACGCGGAGGCCCAGGACCGGCGCCTGCCCCAGCATGTCGGCATG
CACGGAGCGGCCATCAAGGCGGGGGACAGGATGGGTGCTTCCGACAGGGT
CATCTCCGTGGGCCGGGATATGCTGAGGGACGGACATCGGCCTAACCAGC
GTGCCTTGAAGCTCCTAGTCTACCACGCCTACGCTGGCGGTGCCTATCAG
GAGGGCGTGGCCTTCTTTCACGCGCGGGAAGAAGCATACGTCCAGAACGC
TTCTATCATAAAGCTTGTCTTGCGCTGCGCAGAAAAAATTGGAGACGTTG
AAACTGTTCTCTTGTGTATCAAAGAGGCGGAAAGCAAGAAGGAATGGATG
TGCAGGACGGCATCTCGGATCATAAATCGTGAGGAGGCAGAAGAGATGCA
AGGCAAACAAGCCCGGGAGGGTGAAAAAAGAGAAATTAAACGCCGAGCTG
TAGCAGAATTGAAGGCCATGCTTAAGGAGTGGACCTATGAAGCCGGAAAA
CAGGCTCAGGGGCTTGAGGAGAAAGTAAAGTTAAAAGAGAGGAGGCTGGC
TGTATTCCTGAGGACGACGAGGAAGAAGGGGCGAACATGACTATGAATGC
TCGTACGTCGATGACCCTACCGATTTATGGATTTTTTCTTATGTACACTA
TGGAATGAAACGTACCGCAAACAATCAACATAAAAACGCTTTTCT
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protein sequence of rna8009

>rna8009-protein ID=rna8009-protein|Name=rna8009|organism=Nannochloropsis gaditana|type=polypeptide|length=555bp
MLDPALSAESQCEDLRPDEWVYLAEGNLHVLLAYRGQCARFRDHVLRLLK
VRHGGEKKALYDPRQERHYVEHVVGPVLGHQYLETGTSLTVTPSFLNEVA
IQIMPHRPARRAVYDLDKTACTVECLRDLTRFFPPMPHATLTAPPTCQLT
LEIKPKAGYHSRSRLVPPARRFKFQESRFSLMQRYRFAVLETQALEPEWG
DLREGPNWGYSPPDLFSGEVEKMTRTLQALIRNPQIFFQFFVGPRLVYGR
GERQVGLARNAARQLLLPGGACAEGFGAESEEDPLDTLMEAVAQVLQQEC
LLPRLLSLQRLDVLDVEGAGAVMERLVELCGGEEAAAQALLQEEVLQARL
LRTGAEEEGPGGESMSAMARRLEAALGLGPCGARGGSGKGSTCEGEPAGF
VLEQQHKEALATVQRLSQAECLFLLHRWLIALGASDCSIMLAIRRCPDEA
ALPLTRFSPVLGQDASSLQPLESFCQSASEPGLLSFRPTPPAQGGRERGA
VRLAYAMHVVDLGPKPPTKVLSKARLEDGIIAAAQRAGSSAKEASQRSSG
AVSTH
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mRNA from alignment at KK037247.1:342655..346374-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8009 ID=rna8009|Name=rna8009|organism=Nannochloropsis gaditana|type=mRNA|length=3720bp|location=Sequence derived from alignment at KK037247.1:342655..346374- (Nannochloropsis gaditana)
ATGCTCGACCCTGCCCTTTCGGCCGAGTCGCAGTGTGAGGACCTACGTCC CGACGAATGGGTATACCTAGCTGAGGGAAATCTCCATGTCCTTCTGGCCT ATCGCGGCCAGTGCGCGCGTTTTCGAGATCATGTTCTGCGTCTCCTGAAG GTGCGACATGGTGGGGAAAAGAAGGCGCTATACGACCCACGTCAAGAGCG GCACTATGTAGAGCATGTGGTGGGACCTGTGCTCGGGCACCAGTACCTTG AAACGGGCACCTCTTTGACGGTAACGCCCTCATTTTTGAACGAGGTGGCG ATACAAATCATGCCTCACCGCCCCGCACGACGTGCTGTGTACGACCTGGA TAAAACTGCCTGTACAGTGGAGTGCCTAAGGGATCTGACCCGTTTTTTCC CCCCAATGCCGCACGCAACCTTGACCGCCCCGCCCACCTGCCAGCTCACC CTCGAAATCAAACCCAAAGCCGGGTATCATTCCCGGAGCCGACTCGTCCC TCCCGCGCGGCGATTTAAGTTTCAGGAGAGTCGATTCTCGCTCATGCAGC GCTATCGCTTTGCGGTCTTGGAGACCCAGGCTCTGGAGCCCGAGTGGGGG GATCTCAGGGAGGGCCCCAACTGGGGATACTCGCCTCCGGACCTCTTCTC AGGAGAGGTGGAGAAGATGACGAGGACGCTGCAGGCCCTGATTCGGAACC CGCAAATTTTTTTTCAATTTTTTGTGGGTCCCCGGCTCGTGTACGGTCGT GGAGAGCGGCAGGTGGGGCTGGCGCGGAATGCGGCCCGCCAGCTTTTGCT CCCAGGGGGGGCATGCGCCGAGGGCTTCGGGGCCGAGAGCGAGGAGGACC CGTTGGATACCTTGATGGAGGCGGTGGCGCAGGTGCTGCAGCAAGAATGC TTGCTGCCCCGGCTGCTGAGCTTGCAGCGCCTGGACGTGCTTGACGTGGA GGGGGCGGGGGCCGTAATGGAGAGGCTGGTGGAGCTCTGTGGGGGGGAGG AGGCAGCGGCCCAGGCGCTGCTGCAAGAGGAGGTCTTGCAAGCTCGCCTG CTTAGGACAGGAGCGGAGGAGGAGGGGCCGGGCGGAGAGTCGATGTCCGC GATGGCGCGGCGCCTGGAGGCGGCGCTGGGACTGGGCCCTTGCGGCGCAC GAGGAGGGTCAGGGAAGGGCTCTACCTGCGAGGGGGAGCCTGCGGGCTTC GTTCTGGAGCAGCAGCACAAGGAGGCCCTGGCCACTGTCCAGCGCCTGAG TCAAGCCGAATGTCTCTTCCTTCTGCACCGTTGGCTCATCGCCCTGGGGG CCAGCGACTGCAGCATCATGCTCGCGATCCGCCGGTGCCCAGATGAGGCC GCCCTCCCCCTCACGCGGTTCTCCCCGGTCCTAGGTCAGGATGCCTCTTC CTTGCAGCCCCTCGAGAGCTTCTGCCAGAGCGCTTCAGAGCCGGGCCTGC TCTCCTTCCGGCCCACGCCTCCCGCCCAGGGGGGAAGGGAGAGAGGGGCC GTTCGTCTGGCCTACGCCATGCATGTGGTGGACCTGGGGCCCAAGCCACC CACGAAGGTTCTCTCGAAAGCGCGCCTGGAGGACGGGATCATTGCGGCGG CTCAGAGAGCGGGCTCCAGCGCAAAAGAGGCCAGCCAGAGGTCCTCAGGC GCAGTAAGCACGCACTGAAAAGGGGCGTTCGATCGAACGGAAAGGAATAA TAAGGGTCCAGGACCATTTCGGCCGACGAGCGTGTCGTTCTTTGGTCGCA TTGTCTTGGATGAGGCTTCCTCTCTTCGCTTTACAGCATGCGTCTTCCTC GCTCACCCCAAACCCAGCTTGCTCAAAAATTTCTTCTTGCTCTTCTCCTT CTTGCGGACCTCCTTCAAGTCCCTCTCTTTCCAATCGCACTTGCGCAGCT TCACGGGTCGACTCCCCACATACTTCCCGTTCATCTCTCGCAGGGCCTTG AGCCCCTCCAGCGGGTCCAGAAAGGAGACGAAGCCGTAGCCTCGCGACTT GCCTGTGCCCCTGTCGCGGAGCACCTTGGCCTTGGCGAAGGAGGGGTACT TGCCTCGGAAGGCGTTCGTCAGATGCTGCGAGGGGTCGGCGAAGGAGAAG AAAGAGAGAGGGAAGGAAGGGGAGGGAGGTAATGAGGAGAGCCGGGCCAG TCAAGCAGTCGCCGAGGCGCGCAGACAGAGGTAGCTGAGACAGGGCCCAC AGCCAGGCATCGACACGGAAAGGCCGACGGATGAGGCGCCGCCATGAGGG ACACTGCAGACACTCACCTCGTCGGTCACTTCCGGGCCCAGATCCCCGCA GAAAATGCGGAAGTCGTCTGTACACAAGTGTCACTGGGAGTCAGCCTGCC TGCCCGACTCCCACTGACATCACATCCCCGTCCACCCACGCCCCTCCCTT CACCTACGTACTTTCAGGCCACTCGTTCAGCGTCGGATCCTCCCACGTCT GGCCGGGCCCGACGCGGATGAACTTCTTGGGCTTGCCAGCCTCCGTTTGA CCCTGCGTGCCCCCTCCTGGCCTCGGCCCTCCCCCTGGTCTTGGCTGTTG ACCCGCCCCCCATGTCCCCGCTGCGGGCTTGGCACCTGCTCCCACAGTGA AGAGAGTACCCACGCCAGCGCCGGCCACAGCCTGAGGCGGCGCTGTAGTC CCAGAATAGGGGCCCGAGAAGTCTTGCGAAGCAGTAACAGAGCTTGACGG AGCGGGCACACTGGACTCCGGCCTAGCCCGGGTCGGAGCGGCAGAGACGG ATATCGCCGGAGCGAAGGCCGATGGCTTTTCCTGCGTTCCAGATGACGAA TAGGGAGATGCCAACGGGGCGGAGGCCGTGGGAGTGTGCGACCCGTCACC GTCGCCGGCCGTGCCGTAGAGCAGGGGCTTGGCTGCAGCGGCCTTGGCCT TCTTGAAAGCCGGATGGTGCGAGGGAGGCATGGTGGGGCCAATGTCATGA CTTACATTTTCGGGTTCTTCGTCTGCGAATGCAATGGGTGGGTGAACAAA CCGAAAAAGTAGCATGGTGTAAGGAAATCGGTAGCATACTAGCACCGATT CTTCTACACCATATCAGTTTTTGGACGGCAGTTCAAGCCCCCCTACTCCT GTAAAGGAAAACAAAACTCACCACGGCCTCTTTTTCCAGAAGCATTTAAT GTAGTTGAGCCCAGGTGGCGCCCGTCCTGATGTTCTGGCGCCTCGCCTTC TCCTGCATTGGGCCCCGCCTCCTCTTCAGGCGCCTTGACCTCTTTGAGCT CATTGAAAAAACCAAACAGGTCGTCATCCGCCATGACTGCACAGTGAAAC TACCTGGCTATGCATATACATATATCGAGGGGAGTTGAGAGGTGCGGGGA TACAAAGCGCCTTATTTGCGGGGGACCGCCATTTCTCAGGCCCTGATTGC ACTAGGATGATGCCGGAGCAGGCGCCAGTGACGTCATGACCGATTGCTAT CTCCGAGGGAAAACGTTCCTGTCTTTGCCCGTACTGCCTCACTGGCGCGT GGGCACGACAAGGACGTTGCGATCTTCCCGATATTAAAGACGTCGTTGAT GTGGTGGCAGGTTACAATAATGGACCTTACACAATTGCACTGGAAGGGGT TTGTCGCAAACGAGGTCTTTCAACAAACAAAACCGGGCTGACAAGAAAAG CGTTTTTATGTTGATTGTTTGCGGTACGTTTCATTCCATAGTGTACATAA GAAAAAATCCATAAATCGGT
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Coding sequence (CDS) from alignment at KK037247.1:342655..346374-

>rna8009 ID=rna8009|Name=rna8009|organism=Nannochloropsis gaditana|type=CDS|length=1668bp|location=Sequence derived from alignment at KK037247.1:342655..346374- (Nannochloropsis gaditana)
ATGCTCGACCCTGCCCTTTCGGCCGAGTCGCAGTGTGAGGACCTACGTCC
CGACGAATGGGTATACCTAGCTGAGGGAAATCTCCATGTCCTTCTGGCCT
ATCGCGGCCAGTGCGCGCGTTTTCGAGATCATGTTCTGCGTCTCCTGAAG
GTGCGACATGGTGGGGAAAAGAAGGCGCTATACGACCCACGTCAAGAGCG
GCACTATGTAGAGCATGTGGTGGGACCTGTGCTCGGGCACCAGTACCTTG
AAACGGGCACCTCTTTGACGGTAACGCCCTCATTTTTGAACGAGGTGGCG
ATACAAATCATGCCTCACCGCCCCGCACGACGTGCTGTGTACGACCTGGA
TAAAACTGCCTGTACAGTGGAGTGCCTAAGGGATCTGACCCGTTTTTTCC
CCCCAATGCCGCACGCAACCTTGACCGCCCCGCCCACCTGCCAGCTCACC
CTCGAAATCAAACCCAAAGCCGGGTATCATTCCCGGAGCCGACTCGTCCC
TCCCGCGCGGCGATTTAAGTTTCAGGAGAGTCGATTCTCGCTCATGCAGC
GCTATCGCTTTGCGGTCTTGGAGACCCAGGCTCTGGAGCCCGAGTGGGGG
GATCTCAGGGAGGGCCCCAACTGGGGATACTCGCCTCCGGACCTCTTCTC
AGGAGAGGTGGAGAAGATGACGAGGACGCTGCAGGCCCTGATTCGGAACC
CGCAAATTTTTTTTCAATTTTTTGTGGGTCCCCGGCTCGTGTACGGTCGT
GGAGAGCGGCAGGTGGGGCTGGCGCGGAATGCGGCCCGCCAGCTTTTGCT
CCCAGGGGGGGCATGCGCCGAGGGCTTCGGGGCCGAGAGCGAGGAGGACC
CGTTGGATACCTTGATGGAGGCGGTGGCGCAGGTGCTGCAGCAAGAATGC
TTGCTGCCCCGGCTGCTGAGCTTGCAGCGCCTGGACGTGCTTGACGTGGA
GGGGGCGGGGGCCGTAATGGAGAGGCTGGTGGAGCTCTGTGGGGGGGAGG
AGGCAGCGGCCCAGGCGCTGCTGCAAGAGGAGGTCTTGCAAGCTCGCCTG
CTTAGGACAGGAGCGGAGGAGGAGGGGCCGGGCGGAGAGTCGATGTCCGC
GATGGCGCGGCGCCTGGAGGCGGCGCTGGGACTGGGCCCTTGCGGCGCAC
GAGGAGGGTCAGGGAAGGGCTCTACCTGCGAGGGGGAGCCTGCGGGCTTC
GTTCTGGAGCAGCAGCACAAGGAGGCCCTGGCCACTGTCCAGCGCCTGAG
TCAAGCCGAATGTCTCTTCCTTCTGCACCGTTGGCTCATCGCCCTGGGGG
CCAGCGACTGCAGCATCATGCTCGCGATCCGCCGGTGCCCAGATGAGGCC
GCCCTCCCCCTCACGCGGTTCTCCCCGGTCCTAGGTCAGGATGCCTCTTC
CTTGCAGCCCCTCGAGAGCTTCTGCCAGAGCGCTTCAGAGCCGGGCCTGC
TCTCCTTCCGGCCCACGCCTCCCGCCCAGGGGGGAAGGGAGAGAGGGGCC
GTTCGTCTGGCCTACGCCATGCATGTGGTGGACCTGGGGCCCAAGCCACC
CACGAAGGTTCTCTCGAAAGCGCGCCTGGAGGACGGGATCATTGCGGCGG
CTCAGAGAGCGGGCTCCAGCGCAAAAGAGGCCAGCCAGAGGTCCTCAGGC
GCAGTAAGCACGCACTGA
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Synonyms
Publications