rna7999, rna7999 (mRNA) Nannochloropsis gaditana

Overview
Namerna7999
Unique Namerna7999
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length381
Alignment locationKK037247.1:320614..321524 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100340g5.5992.mrna
Orig protein idgnl|cribi|Naga_100340g5.5992
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:320614..321524 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100340g5gene7745Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7999rna7999-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22696.1cds7977Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7999 ID=rna7999|Name=rna7999|organism=Nannochloropsis gaditana|type=mRNA|length=381bp
ATGGTCAAAGACCAGAAAGGCCCATCGTTCCTTCGCTTTGGTGGGAAAAA
GTCAGAAAACAATGCTGGTGCTCGTCATCGTACCGGACTGTCATTGTCTT
GCTCCCATGCCACTTCTAAGCTGCCAGGGGTCTCCCCAGGTCGGCAGGAG
CCCGTAAAGGACGTGAGGGCAGTCCCTCCAGCGAGCGCCACAAACGACAG
CGGCTCTGACCGGCACTCTCCCAGCATCACCCACTGTCGGCATAGCAGTG
CCGGCAGCAGCATCACGGGTGTCTTGGCAACAAGCCGGGCGGAAGTGATG
CAGACTGGCTCGATGGGCGCCTGCTCGGCCCCGGCCACCTCTTCGAGCGC
CTCCGTCTCCCCCTCCCCTTCCCCAAGGTAA
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protein sequence of rna7999

>rna7999-protein ID=rna7999-protein|Name=rna7999|organism=Nannochloropsis gaditana|type=polypeptide|length=280bp
MEAGHTCRGRGAAACKEDDSEQAARDRGEGVMTLYAHPEFEAEFGELVGT
VIADAVSDDPPGAKTSRGTKGGHEAASPTPPCLLPASPSKAGPGTLLLYV
AFVCTGRLDDPIHTHALKPFLAAGASVVLFLLRAGRGNQVARIQPRQELT
GLPCFEFLVFKRALQRTEDGYAKEVRLLRSFLVKSLPSLRVQSADLGAAT
EGVTAEGVRPGKYGAPADEQKGLPSLTDYLFRHRTDNNNSHHHEDADIKH
FNTRLKWNKIVKNKLAYVLQHQESLRKENK
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mRNA from alignment at KK037247.1:320614..321524+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7999 ID=rna7999|Name=rna7999|organism=Nannochloropsis gaditana|type=mRNA|length=911bp|location=Sequence derived from alignment at KK037247.1:320614..321524+ (Nannochloropsis gaditana)
atggaggcggggcacacttgtcgagggagaggggctgcAGCCTGCAAAGA
GGATGACTCAGAGCAAGCCGCGAGAGATAGAGGGGAAGGTGTAATGACGC
TGTACGCCCACCCGGAATTTGAGGCCGAATTCggggagctggtggggaCT
GTTATCGCCGATGCCGTGTCGGACGATCCACCAGGGGCGAAGACGTCTCG
GGGAACGAAAGGCGGGCACGAGGCAgcttcccccacccctccctgcctcc
ttccagccTCACCCTCCAAGGCTGGGCCCGGCACCCTACTCCTTTACGTG
GCTTTTGTCTGCACAGGTCGCCTCGACGACCCCATCCACACGCATGCTCT
CAAACCCTTTCTCGCCGCTGGCGCCTCCGTCGTGCTGTTTCTGCTTcgag
cggggcgggggaatcAAGTGGCTCGAATCCAGCCCCGGCAAGAGCTGACG
GGATTGCCGTGCTTCGAGTTCTTGGTCTTCAAGAGAGCGTTAcagaggac
ggaggacgggtatgcgaaggaggtgaggcTTCTGAGGTCCTTTCTTGTCA
AGTCTCTTCCATCGCTCCGCGTGCAAAGCGCAGATCTGGGCGCAGCAACA
GAGGGAGTGACTGCAGAAGGAGTGCGACCAGGCAAGTATGGAGCGCCGGC
GGACGAACAAAAGGGGTTGCCCTCTCTGACAGACTATTTGTTCCGGCATA
GGACTGACAACAACAACTCGCATCATCATGAGGATGCCGACATAAAACAT
TTCGTCCCTTGAAGCCATCTGTGATTGGAAGATGCACATCTTGAATTGCT
CTCCAAGTGAGAGTTAGCAAGAACACGAGACTAAAATGGAATAAAATTGT
CAAAAACAAACTTGCATACGTCTTGCAACATCAGGAAAGTTTACGAAAGG
AAAATAAGTAA
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Coding sequence (CDS) from alignment at KK037247.1:320614..321524+

>rna7999 ID=rna7999|Name=rna7999|organism=Nannochloropsis gaditana|type=CDS|length=1686bp|location=Sequence derived from alignment at KK037247.1:320614..321524+ (Nannochloropsis gaditana)
atggaggcggggcacacttgtcgagggagaggggctgcAGCCTGCAAAGA
GGATGACTCAGAGCAAGCCGCGAGAGATAGAGGGGAAGGTGTAATGACGC
TGTACGCCCACCCGGAATTTGAGGCCGAATTCggggagctggtggggaCT
GTTATCGCCGATGCCGTGTCGGACGATCCACCAGGGGCGAAGACGTCTCG
GGGAACGAAAGGCGGGCACGAGGCAgcttcccccacccctccctgcctcc
ttccagccTCACCCTCCAAGGCTGGGCCCGGCACCCTACTCCTTTACGTG
GCTTTTGTCTGCACAGGTCGCCTCGACGACCCCATCCACACGCATGCTCT
CAAACCCTTTCTCGCCGCTGGCGCCTCCGTCGTGCTGTTTCTGCTTcgag
cggggcgggggaatcAAGTGGCTCGAATCCAGCCCCGGCAAGAGCTGACG
GGATTGCCGTGCTTCGAGTTCTTGGTCTTCAAGAGAGCGTTAcagaggac
ggaggacgggtatgcgaaggaggtgaggcTTCTGAGGTCCTTTCTTGTCA
AGTCTCTTCCATCGCTCCGCGTGCAAAGCGCAGATCTGGGCGCAGCAACA
GAGGGAGTGACTGCAGAAGGAGTGCGACCAGGCAAGTATGGAGCGCCGGC
GGACGAACAAAAGGGGTTGCCCTCTCTGACAGACTATTTGTTCCGGCATA
GGACTGACAACAACAACTCGCATCATCATGAGGATGCCGACATAAAACAT
TTCAACACGAGACTAAAATGGAATAAAATTGTCAAAAACAAACTTGCATA
CGTCTTGCAACATCAGGAAAGTTTACGAAAGGAAAATAAGTAAatggagg
cggggcacacttgtcgagggagaggggctgcAGCCTGCAAAGAGGATGAC
TCAGAGCAAGCCGCGAGAGATAGAGGGGAAGGTGTAATGACGCTGTACGC
CCACCCGGAATTTGAGGCCGAATTCggggagctggtggggaCTGTTATCG
CCGATGCCGTGTCGGACGATCCACCAGGGGCGAAGACGTCTCGGGGAACG
AAAGGCGGGCACGAGGCAgcttcccccacccctccctgcctccttccagc
cTCACCCTCCAAGGCTGGGCCCGGCACCCTACTCCTTTACGTGGCTTTTG
TCTGCACAGGTCGCCTCGACGACCCCATCCACACGCATGCTCTCAAACCC
TTTCTCGCCGCTGGCGCCTCCGTCGTGCTGTTTCTGCTTcgagcggggcg
ggggaatcAAGTGGCTCGAATCCAGCCCCGGCAAGAGCTGACGGGATTGC
CGTGCTTCGAGTTCTTGGTCTTCAAGAGAGCGTTAcagaggacggaggac
gggtatgcgaaggaggtgaggcTTCTGAGGTCCTTTCTTGTCAAGTCTCT
TCCATCGCTCCGCGTGCAAAGCGCAGATCTGGGCGCAGCAACAGAGGGAG
TGACTGCAGAAGGAGTGCGACCAGGCAAGTATGGAGCGCCGGCGGACGAA
CAAAAGGGGTTGCCCTCTCTGACAGACTATTTGTTCCGGCATAGGACTGA
CAACAACAACTCGCATCATCATGAGGATGCCGACATAAAACATTTCAACA
CGAGACTAAAATGGAATAAAATTGTCAAAAACAAACTTGCATACGTCTTG
CAACATCAGGAAAGTTTACGAAAGGAAAATAAGTAA
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Synonyms
Publications