rna7991, rna7991 (mRNA) Nannochloropsis gaditana

Overview
Namerna7991
Unique Namerna7991
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length551
Alignment locationKK037247.1:301191..301748 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100844g2.6820.mrna
Orig protein idgnl|cribi|Naga_100844g2.6820
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:301191..301748 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100844g2gene7738Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7991rna7991-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22703.1cds7969Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7991 ID=rna7991|Name=rna7991|organism=Nannochloropsis gaditana|type=mRNA|length=551bp
GGAGCGATCTGTCCATGGATTTACTGTCGTTGTCATCCTTGAGTGTCGTA
ATCAAAAGTTTTTCAGAACACGGCTCTGATAGAGAACCCCCTCATAGGGG
CTAACCTCTTCATGAAGGGACGCCCAAAACTCACGCACGCACGCCCCTCA
ATCCGCAGCCAAAAAAAACAACTTGAAAGGGCATGCCTCCTTCAGCGTTT
TCCTCCTCGCCACTGCCGCCAGTGGCCGGCTCCTCCGCCCTTTTGGCTGC
TTTACGCCAGGGCATGGAGGCGCAGGGCCTGGATGCTCTCGTTGTTCCCT
CCGAAGACGCCCACCTGTCTGAGTACGTCCCTGCACGCGACCGGCGGCGA
GAGTACGTGACAGGATTCAGCGGAAGCGCGGGCACGGCGGTCGTCACACC
CGAACATGCGTTACTGTGGACGGACGGGCGATATTTTCTTCAGGCGTCAC
AGGAGCTGGGGCCCGACTGGGTGTTGATGAAGGCGCTCGAGAAGGGCGTG
CCCACGGTGGAGGCCTGGCTGGCCAGCCACCTCCACCAGACGAAGGTTTG
A
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protein sequence of rna7991

>rna7991-protein ID=rna7991-protein|Name=rna7991|organism=Nannochloropsis gaditana|type=polypeptide|length=171bp
MRAGVLQEGPTYRCRSIRTPRGALAPPPRWHRRALPAANRRGPRRGSERR
KSWSTGSFRNVSKPCGASRLASRNGAPPTLLRDGPPPVLDFRDNQAMNKA
QSRGVFYPRIPSNYLCTSTTGGSRHFYRGNISRYYCDSRCPSSYDETSRV
DMGIPPAKFPPTLSLAPPPVW
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mRNA from alignment at KK037247.1:301191..301748+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7991 ID=rna7991|Name=rna7991|organism=Nannochloropsis gaditana|type=mRNA|length=558bp|location=Sequence derived from alignment at KK037247.1:301191..301748+ (Nannochloropsis gaditana)
ATGCGTGCTGGGGTTTTGCAGGAGGGCCCTACGTACCGTTGCCGCAGCAT
TCGGACTCCCCGGGGGGctctggctcctcctccacgctggcACCGCCGGG
CTTTGCCGGCGGCGAATCggagggggccaaggagggggtcggaaaggagg
aagagctggagTACCGGGTCCTTCCGAAATGTTTCCAAACCGTGCGGAGC
GTCAAGGCTCGCTTCGAGAAATGGCGCGCCACCAACCTTACTCCGAGatg
gccctcctccagtgCTCGACTTCCGCGACAATCAGGCAATGAACAAGGCC
CAGAGCAGGGGCGTCTTCTATCCTCGCATTCCTTCAAACTACTTGTGTAC
CAGTACCACTGGCGGTTCCCGTCACTTTTATCGCGGCAACATAAGCCGCT
ATTACTGCGACAGCCGTTGCCCCAGCTCCTATGATGAGACCTCCAGAGTC
GATATGGGAATACCACCCGCGAAATTTCCACCCACGCTGTCCTTGGCACC
GCCGCCAGTCTGGTGATTGGCACGCTACGGTGGACGGACGAATCTCTCTG
GCTTAATT
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Coding sequence (CDS) from alignment at KK037247.1:301191..301748+

>rna7991 ID=rna7991|Name=rna7991|organism=Nannochloropsis gaditana|type=CDS|length=516bp|location=Sequence derived from alignment at KK037247.1:301191..301748+ (Nannochloropsis gaditana)
ATGCGTGCTGGGGTTTTGCAGGAGGGCCCTACGTACCGTTGCCGCAGCAT
TCGGACTCCCCGGGGGGctctggctcctcctccacgctggcACCGCCGGG
CTTTGCCGGCGGCGAATCggagggggccaaggagggggtcggaaaggagg
aagagctggagTACCGGGTCCTTCCGAAATGTTTCCAAACCGTGCGGAGC
GTCAAGGCTCGCTTCGAGAAATGGCGCGCCACCAACCTTACTCCGAGatg
gccctcctccagtgCTCGACTTCCGCGACAATCAGGCAATGAACAAGGCC
CAGAGCAGGGGCGTCTTCTATCCTCGCATTCCTTCAAACTACTTGTGTAC
CAGTACCACTGGCGGTTCCCGTCACTTTTATCGCGGCAACATAAGCCGCT
ATTACTGCGACAGCCGTTGCCCCAGCTCCTATGATGAGACCTCCAGAGTC
GATATGGGAATACCACCCGCGAAATTTCCACCCACGCTGTCCTTGGCACC
GCCGCCAGTCTGGTGA
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Synonyms
Publications