rna799, rna799 (mRNA) Nannochloropsis gaditana

Overview
Namerna799
Unique Namerna799
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1794
Alignment locationCM002456.1:445596..447122 -

Link to JBrowse

Properties
Property NameValue
Productfad-dependent pyridine nucleotide-disulfide oxidoreductase
Orig transcript idgnl|cribi|Naga_100106g13.1446.mrna
Orig protein idgnl|cribi|Naga_100106g13.1446
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:445596..447122 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100106g13gene765Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29872.1cds799Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna799rna799-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna799 ID=rna799|Name=rna799|organism=Nannochloropsis gaditana|type=mRNA|length=1794bp
CGCTCTGGATCCTCCGCCCTTGAGGCTTATGTCCCCGCATGTTTTCAAAG
GAACATGTCGGCGTCGCTTCTCAATTCGGTGGAGATTTGAAGCGGAACAA
AATTTTCTCGTGCGAACTGCGATATTGGTGACCTTTGGCTTCCATCTCCG
ACATGATATTAGTAGATTCGCTTAGGGAAAGAGGCACCCGGTCGCCGGCT
GCATCCAACAACATGTCCTCAGCTCTCTACTCCCCATGGCGGCCACTCGT
CATTTTTTACGGTATTTGCTGCTATAGTGCCACTGCCTTTATGTCGAGCA
CGCCATTTTGTACCCGTGGTGTGCCAAAGTCCATTAGGAGTAGAAGCTTT
GGGTCATCACGGTTGGCCAGCACTATGACCGTGACGGCTGCGGACATCAC
GACGGCAGGTAAACTGGGCGAGGCTGAGACAAGCGCTCTCTCCGACAAGT
ACAAGAGTGTCCTATATTTGGCCACCGATAAGGGCGCAGACAAAGGCATT
GAGCCCAACGGATTCGCCTCTCTACGTGGACTTACTACTCGTCATTTGCC
GGTTGATGTGAAGGACGGGCTTTCGCTACAACTGGCCACGGATGCCCTAC
AGGCTTTGGACGAGCTGCCCGCCCCCGCCTTAGTGGTCTGTAGCTCGGGG
GGGCGGGCCTCCGCAGTGCAGTGCCTCCGTAAGGCGACAGAGGAGGGGTG
GACGAAAGACCAAACACTCGCTTACGCGCTGGAAATGAAGTTACCGTTCG
TAAAGAATCCGAGCCTCAAAGATTGGGTGCTGGCTACCGTCGCCGCCAGG
GAATACAAGGACGAGCTTCCATTGCTGTTCCGTCCCCTATACGAAGAGAC
GTCCTGGACTTACACCTTCTTATTGGGCTGCCCCGTGACCAAAGAGGCCA
TCCTGATCGATCCAGTGGATCTGACTGTGGAGAGGGACTTGCAGGTGATC
AAAGAGATGGGCCTCACCCTCGTGGCCGCTCTCAACACGCATTGCCACGC
CGACCACGTGACGGGAAGCGGACTCCTCGCACAGAAAGTACCGGGCTGCA
AGTCCATGATCGCAAAAATATCGGGCGCCAAAGCGAGCATTCATTTGGAG
CCCGGGAACCGGGTTCGATTCGGGCGTCGTTATGTGGAAGCGCGTGCCAC
GCCGGGGCACACGAACGGATGCATGACTTTCGTCACGGACGACATGAAGA
TGGCTTTCACAGGGGACGCATTGTTGATCAGAGGCTGCGGGCGCACGGAT
TTCCAGCAGGGATCTCCAGAGACGATGTTTGAGAGCATCTGGACGCAGAT
TTTCTCCTTACCGCACGAGACCTCGGTGTATCCGGGGCATGACTACAGGG
GCCGGCTGATGTCGACCATCGGGGAGGAGAAACGCTTCAACTCCCGTTTG
TCCGGAAAGTCGAAGGAGGAATTCATAGAAATCATGAACAATTTGAAACT
GGCGTACCCGAAGAAGATCGACGTGGCATTGCCGGCCAACCTGGTGGACG
GGGTGCTGGCTAGCTAGGAAAGTGGGTTACCTGGCTAGCTAGGGAGGGTT
ACTCGTCTCAAGTTCATGGCGAGCGAATGAATGATCGGGAGGGACTATGA
TCGGGATGGTCGGCGGGCAATTATGCAGGGCATGCTAGTATGAGTGCAAG
GTAGAATGCTACGGACGTCATGGTGAAGCTCGACGACGCTTCCCACAATC
AGATAGCGGTGGGTCTCGGTTGGGACGCATAACCTCCATTTCTGCCCTTG
AACGACCAAAGAAAGAAGTGGAAAAAATACAACCCGCCCGGACA
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protein sequence of rna799

>rna799-protein ID=rna799-protein|Name=rna799|organism=Nannochloropsis gaditana|type=polypeptide|length=508bp
MKGSDVLGFFSVFLVAHNAAAFLRPPCLKDASHGRGTYPHQRSVFTLVAS
PLSATSTANDINSGPTSHHKILILGGGTGGCGSAAHLINEGMQAADICIV
EPASTHYYQPLWTLVGAGIFDRATSARPMSDIIPKGVAWARDAASKIDPE
INTVQCASGRQLTYDYLIVATGLQCDWDKIPGLQDALHNSETSHVCSNYH
PEYAENTWRVLRGLSEGSALFTQPPSPVKCGGAPQKIMWLADDYLRRNNR
RNAVDINFFMPQKVYFGVPRYAEVLESESKARGVGFVFETLLVGVNGERR
EATFQRVKDGSEYTLPYAMLHVTPPMSAPDFLKTSPLADPKGFVEVDKYT
TQHVRYPNVFALGDSSSLPTSKTMAAITGQAPVLVHNLLRVMRGKRATAT
YDGFTSCPIVLGYDKLLMTEFVYDCVPQETFTKIPLPFLDQGKPSFFFFL
VKKYVFPFVYWNLFMKGRWYGSRLIFKPDYSEADRRADMEEESKDVKGMA
DAQAGKRA
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mRNA from alignment at CM002456.1:445596..447122-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna799 ID=rna799|Name=rna799|organism=Nannochloropsis gaditana|type=mRNA|length=1527bp|location=Sequence derived from alignment at CM002456.1:445596..447122- (Nannochloropsis gaditana)
ATGAAGGGGTCAGATGTCCTCGGTTTCTTTTCAGTATTTTTAGTCGCTCA
CAACGCGGCTGCATTTTTGCGACCTCCCTGCCTCAAAGATGCCAGCCATG
GCCGTGGGACATACCCACATCAACGCTCTGTATTCACCCTCGTCGCAAGC
CCTCTTTCCGCAACATCTACCGCCAACGACATCAACAGCGGACCCACTAG
TCATCATAAAATTTTGATACTTGGCGGAGGCACTGGAGGGTGCGGTTCGG
CTGCCCATTTAATTAATGAGGGAATGCAAGCGGCCGACATCTGCATTGTC
GAACCCGCCTCGACTCACTATTATCAACCCCTGTGGACTTTGGTGGGCGC
AGGCATATTTGATCGAGCAACGTCAGCACGACCAATGTCCGACATAATTC
CTAAGGGAGTCGCTTGGGCCCGAGACGCCGCAAGTAAAATCGATCCAGAA
ATCAATACCGTGCAGTGCGCTAGCGGACGACAGCTTACTTATGACTATCT
TATAGTTGCCACAGGCCTTCAATGCGACTGGGATAAAATCCCAGGCCTAC
AGGATGCCTTGCACAACAGTGAAACCTCACACGTGTGTTCGAATTACCAT
CCCGAGTATGCGGAGAACACCTGGCGCGTCCTTAGGGGCCTCAGCGAAGG
CAGTGCTCTCTTCACCCAACCGCCTTCCCCTGTCAAGTGCGGGGGAGCCC
CTCAAAAAATCATGTGGCTTGCCGACGACTATTTGCGTCGGAACAACAGG
CGCAACGCCGTGGACATTAATTTTTTCATGCCACAAAAAGTCTATTTCGG
AGTGCCTCGGTATGCGGAGGTCCTTGAGTCGGAGTCCAAGGCCCGCGGCG
TTGGTTTTGTCTTCGAGACTTTGCTGGTGGGCGTCAACGGGGAGCGCCGC
GAGGCCACTTTCCAACGGGTGAAGGACGGGAGCGAATACACGCTGCCCTA
CGCCATGCTCCACGTGACTCCGCCCATGTCCGCGCCCGACTTCCTCAAGA
CGAGCCCCCTGGCCGACCCCAAGGGGTTCGTGGAGGTGGACAAGTACACG
ACCCAGCACGTGCGCTACCCGAACGTTTTCGCCCTCGGGGACTCCTCCTC
GCTGCCCACCTCCAAGACCATGGCCGCGATCACGGGCCAGGCGCCGGTGC
TGGTGCATAACCTCCTTCGCGTCATGCGGGGGAAGCGAGCGACTGCCACC
TACGACGGCTTCACTTCCTGCCCCATCGTCCTGGGCTACGACAAGCTGCT
CATGACCGAATTTGTCTACGACTGTGTCCCGCAGGAAACATTCACGAAAA
TTCCTTTGCCTTTCTTAGACCAAGGCAAGCCCTCTTTCTTCTTTTTCTTG
GTCAAGAAATACGTGTTCCCATTTGTGTACTGGAACCTGTTTATGAAGGG
GAGGTGGTACGGATCGAGGCTTATTTTCAAGCCCGATTATTCGGAAGCCG
ATCGCCGGGCGGACATGGAGGAAGAGAGCAAGGATGTAAAGGGAATGGCA
GATGCTCAAGCGGGGAAGCGGGCTTAG
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Coding sequence (CDS) from alignment at CM002456.1:445596..447122-

>rna799 ID=rna799|Name=rna799|organism=Nannochloropsis gaditana|type=CDS|length=1527bp|location=Sequence derived from alignment at CM002456.1:445596..447122- (Nannochloropsis gaditana)
ATGAAGGGGTCAGATGTCCTCGGTTTCTTTTCAGTATTTTTAGTCGCTCA
CAACGCGGCTGCATTTTTGCGACCTCCCTGCCTCAAAGATGCCAGCCATG
GCCGTGGGACATACCCACATCAACGCTCTGTATTCACCCTCGTCGCAAGC
CCTCTTTCCGCAACATCTACCGCCAACGACATCAACAGCGGACCCACTAG
TCATCATAAAATTTTGATACTTGGCGGAGGCACTGGAGGGTGCGGTTCGG
CTGCCCATTTAATTAATGAGGGAATGCAAGCGGCCGACATCTGCATTGTC
GAACCCGCCTCGACTCACTATTATCAACCCCTGTGGACTTTGGTGGGCGC
AGGCATATTTGATCGAGCAACGTCAGCACGACCAATGTCCGACATAATTC
CTAAGGGAGTCGCTTGGGCCCGAGACGCCGCAAGTAAAATCGATCCAGAA
ATCAATACCGTGCAGTGCGCTAGCGGACGACAGCTTACTTATGACTATCT
TATAGTTGCCACAGGCCTTCAATGCGACTGGGATAAAATCCCAGGCCTAC
AGGATGCCTTGCACAACAGTGAAACCTCACACGTGTGTTCGAATTACCAT
CCCGAGTATGCGGAGAACACCTGGCGCGTCCTTAGGGGCCTCAGCGAAGG
CAGTGCTCTCTTCACCCAACCGCCTTCCCCTGTCAAGTGCGGGGGAGCCC
CTCAAAAAATCATGTGGCTTGCCGACGACTATTTGCGTCGGAACAACAGG
CGCAACGCCGTGGACATTAATTTTTTCATGCCACAAAAAGTCTATTTCGG
AGTGCCTCGGTATGCGGAGGTCCTTGAGTCGGAGTCCAAGGCCCGCGGCG
TTGGTTTTGTCTTCGAGACTTTGCTGGTGGGCGTCAACGGGGAGCGCCGC
GAGGCCACTTTCCAACGGGTGAAGGACGGGAGCGAATACACGCTGCCCTA
CGCCATGCTCCACGTGACTCCGCCCATGTCCGCGCCCGACTTCCTCAAGA
CGAGCCCCCTGGCCGACCCCAAGGGGTTCGTGGAGGTGGACAAGTACACG
ACCCAGCACGTGCGCTACCCGAACGTTTTCGCCCTCGGGGACTCCTCCTC
GCTGCCCACCTCCAAGACCATGGCCGCGATCACGGGCCAGGCGCCGGTGC
TGGTGCATAACCTCCTTCGCGTCATGCGGGGGAAGCGAGCGACTGCCACC
TACGACGGCTTCACTTCCTGCCCCATCGTCCTGGGCTACGACAAGCTGCT
CATGACCGAATTTGTCTACGACTGTGTCCCGCAGGAAACATTCACGAAAA
TTCCTTTGCCTTTCTTAGACCAAGGCAAGCCCTCTTTCTTCTTTTTCTTG
GTCAAGAAATACGTGTTCCCATTTGTGTACTGGAACCTGTTTATGAAGGG
GAGGTGGTACGGATCGAGGCTTATTTTCAAGCCCGATTATTCGGAAGCCG
ATCGCCGGGCGGACATGGAGGAAGAGAGCAAGGATGTAAAGGGAATGGCA
GATGCTCAAGCGGGGAAGCGGGCTTAG
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Synonyms
Publications