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Properties
| Property Name | Value |
|---|
| Product | phosphatidylinositol kinase |
| Orig transcript id | gnl|cribi|Naga_101049g1.10511.mrna |
| Orig protein id | gnl|cribi|Naga_101049g1.10511 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:251541..252962 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7968 ID=rna7968|Name=rna7968|organism=Nannochloropsis gaditana|type=mRNA|length=1566bp
TCCACGGGCGAGCTTCCATCGTGTCACCCGCCTCCAAAACCAGACAACCC
GCGACAAAACCACAATCTTGATATCAGCGTTCATGCGTCTCATGGCTTGT
GCGGGGTTGTAGATAGTCTTGTGCTGACGCGTCTTGTCGTTGTATGGTGT
CAAGGTGGTTTTAGAGGCTGGCACGTCCGCTTCAAGCAATGAATTCCTAG
CTACTGGAACATAAGGCTGTGTCTTTGGGCGCTGCCTCATGAATCGCACG
GGGGAGTTCTTTGAAAGACGTTCACACAGAGCCAGGAGCCTTCGATGTTT
ACCCTGATTGGGTCATTTCCGTGGTTGATGACTTGTCTAGGCGTAATTTA
TTTTGTTGTCACACAGCCCTTTTACTCTCACGATTCCCCGCCCCAGTGCA
ACCTAATAATCTTTCCCATACTTCTCGCTTCTGACATTCGTATTCACAAC
GTGGGGAGGACGTCATCTGATAGCGCAATTTGAGAATAGCGAGCTTTGCA
GGCGCTTTGTGGCCAGGGGTGGGTTTGGTGGCACATGTGCAGGATTTTAT
CGAATATGCGTCCTTCATTTTATGCTCCAGCATTGACCGAAGGAGTGCCC
CTCCTCCACATAAAGTCTGCACTGTGCGTAGCATCACAGAAAGCAATTGC
TTCACTGTCATTATCAATTTAAAGCCGTGCATTGGCGTCGTAGAATTTGG
CAAATGCGTTGTCGTCCGCTTCTACTTTCGCCTCGTCTCGTCCTCCCCAC
TTCGCTTCCCCTCACTCACGTATCCTTTTCTTTCCCTCTCCCCTTCCCGA
TAAAACTCTCATGTTTGAGATTAGACTGAACAAGATCTTATCAACAAAAG
GTTACCTCGATCCAGGTGACGGTGGGAAACGCAAGAAGTTCTCAAAAATC
AAGAGCAACAAGCTGTCCCTAGCCATGGGGTGCGTGCGCGTCAAACTCAC
CTATGAGGGTCGCACCTTCAGACGCACCGTGGACCCTCGGTCCTTTACGT
GGGCGCAATTTCTGGCCTGGGGCCTCGTGTGCTTCCCGTCCCTCGCGGAG
CCCGCCTCCCTCCACTTGACGTACGATGACGAGGATGGGGACCACCCCTC
CTTGAGGGGGGAGGAGGATTGGCGCGAAGCCCTGTGTGCGTGCGAGCGGC
TCGACCGTCCCTTGCGCGTGACGATGACGAGGGAGGAAGGGGGGGAGGTA
GGGAGGGAGGGAGGCGGCTTGGGCCCTGAGTCCTTGCTGAGCGAGGGAGA
GGAGACCGTGCTGGTCGCGGCCGAGGGCGAGGTCGAGGAAGGGAGGGAGG
GGCCGGGGGAGGAGGGGGAAGGCACAACCCGAGGCCCCGGATTGACCGAG
AGCCAGAGCACGGTCCCTGTTTTCCCCGCACTTCCTCCCTCGCCCCCGGA
CTCCGCCCCTCCCTCCTTCCCCACCATCACCACGAGCTTCCTGCGGGCCC
TTCAAGCGCAACTGGCGCAAGGGAGGGAGGGAGGGAGGGAGGGAGAGGGG
GGAGAAAGAACGGTGCAGGCGGAGGAGAGGCAGACGCCTGCTCAAGCGAG
GATGCTCGCGGCCTTG back to topprotein sequence of rna7968 >rna7968-protein ID=rna7968-protein|Name=rna7968|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
MLKIWCMANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVA
LPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELV
RATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLET
AAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLM
EKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEDRGLRTEGLRL
QANRSYFHPAPGNAYVSLSM back to topmRNA from alignment at KK037247.1:251541..252962+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7968 ID=rna7968|Name=rna7968|organism=Nannochloropsis gaditana|type=mRNA|length=1422bp|location=Sequence derived from alignment at KK037247.1:251541..252962+ (Nannochloropsis gaditana)
gCGCGAAGGGCGCTCTCAGCACGCTTTGTGGCAGACTTGACGTTTCCAGA
TGAATCCGTGGTGCAGCCAGGGCTGGACATGCTCAAGATCTGgtgaggat
gggagggaggaagggagggagggcgggcagaagggagggaggggggacgg
gcgtGGGGATTCAGCGCAAGGCGGACCTCAAACCTCTTCCCTCAATTTCT
CTTTCCAGGTGCATGGCCAACAACGGATCGGAACGCTTTCCTCCCAACGC
GCGCCTGGTCTTTGTCCACGGGCATCGGATGGagggcccgagggaggggg
tgccggtgggggaggtcgaggcaggggcggagtTCAAGTAcgtacggagg
gagggagggaggaagggagggagggagggaggacagagaggacgacgaga
aggagaggaggcgtagagaaagcagggagagCGGTATCTTTGGTTATCCT
CTCGGGTCGTGACTGCTCTCGGAAGGTTAGTTAGTACCGAGGCACTGACC
ggccatccctcctctctgaTTTACTATCTCCCGCCCGACCCTTTCCCAGC
GTGGCGCTTCCCCTCACGACGCCCACGGTTCCCGACCGTTACGTCGGTTA
CTGGCAGTTGGAAGCGCATGGGCCTCGCGGGGAGCGGGTGGAGCTGGGGC
ATCGGATTTGGATtgacgtggtggtggaggagaaagaggaggggtgggag
ttGGTGCGAGCGACacgagaggaggggggccagggagaaagggaggaggg
agcgagggcgatgggaggcgaagaaggagaggaaatgggggaggatgatg
gtgacgaggaggaaaaggttgAAGAtgacggggaagacgaaTCCCTGTTG
GAgacggcagcggcagccaccctcgcttcctccttcccttcccctctcgc
ttcctccctcccgggctCGCAAGACTGGTCAAAATGGACCCCTCAACTGG
AGCTCTTGGCCGCCATGGGCTTCGAGACGCGCCTGGATGAATGCGTAGTG
CTCATGGAAAAaatctggaaggaggaaggggaggagggaggggtgggagg
ggctgcgcccgcctcctcctcctcgggtggtgctcctccttgttcgCCTT
CGTCCGATCCCTCCTTGATagagggtggggaaaggCGAAGCGAGAGAGcg
aaggcgtggggggaagaggaaaaactGCAGGCGGTAGTAGAAGCCTTGCT
AGGGAGGGACTCTGAGGAGGGACGCCGTCGGTAGACAagatggcgaggaa
gaaggacgggaagTTCGGAGGGGTGGTGTACGGTGACACGCAGAAATGCT
GCTTATCATGAGAGCCTTTCCTAAAAGATAGAGGGCTCAGGACTGAAGGG
CTTCGTCTCCAAGCCAATCGCTCTTACTTTCATCCAGCACCGGGTAACGC
GTATGTTAGCTTGAGTATGTAA back to topCoding sequence (CDS) from alignment at KK037247.1:251541..252962+ >rna7968 ID=rna7968|Name=rna7968|organism=Nannochloropsis gaditana|type=CDS|length=3252bp|location=Sequence derived from alignment at KK037247.1:251541..252962+ (Nannochloropsis gaditana)
ATGCTCAAGATCTGGTGCATGGCCAACAACGGATCGGAACGCTTTCCTCC
CAACGCGCGCCTGGTCTTTGTCCACGGGCATCGGATGGagggcccgaggg
agggggtgccggtgggggaggtcgaggcaggggcggagtTCAACGTGGCG
CTTCCCCTCACGACGCCCACGGTTCCCGACCGTTACGTCGGTTACTGGCA
GTTGGAAGCGCATGGGCCTCGCGGGGAGCGGGTGGAGCTGGGGCATCGGA
TTTGGATtgacgtggtggtggaggagaaagaggaggggtgggagttGGTG
CGAGCGACacgagaggaggggggccagggagaaagggaggagggagcgag
ggcgatgggaggcgaagaaggagaggaaatgggggaggatgatggtgacg
aggaggaaaaggttgAAGAtgacggggaagacgaaTCCCTGTTGGAgacg
gcagcggcagccaccctcgcttcctccttcccttcccctctcgcttcctc
cctcccgggctCGCAAGACTGGTCAAAATGGACCCCTCAACTGGAGCTCT
TGGCCGCCATGGGCTTCGAGACGCGCCTGGATGAATGCGTAGTGCTCATG
GAAAAaatctggaaggaggaaggggaggagggaggggtgggaggggctgc
gcccgcctcctcctcctcgggtggtgctcctccttgttcgCCTTCGTCCG
ATCCCTCCTTGATagaggATAGAGGGCTCAGGACTGAAGGGCTTCGTCTC
CAAGCCAATCGCTCTTACTTTCATCCAGCACCGGGTAACGCGTATGTTAG
CTTGAGTATGTAAATGCTCAAGATCTGGTGCATGGCCAACAACGGATCGG
AACGCTTTCCTCCCAACGCGCGCCTGGTCTTTGTCCACGGGCATCGGATG
Gagggcccgagggagggggtgccggtgggggaggtcgaggcaggggcgga
gtTCAACGTGGCGCTTCCCCTCACGACGCCCACGGTTCCCGACCGTTACG
TCGGTTACTGGCAGTTGGAAGCGCATGGGCCTCGCGGGGAGCGGGTGGAG
CTGGGGCATCGGATTTGGATtgacgtggtggtggaggagaaagaggaggg
gtgggagttGGTGCGAGCGACacgagaggaggggggccagggagaaaggg
aggagggagcgagggcgatgggaggcgaagaaggagaggaaatgggggag
gatgatggtgacgaggaggaaaaggttgAAGAtgacggggaagacgaaTC
CCTGTTGGAgacggcagcggcagccaccctcgcttcctccttcccttccc
ctctcgcttcctccctcccgggctCGCAAGACTGGTCAAAATGGACCCCT
CAACTGGAGCTCTTGGCCGCCATGGGCTTCGAGACGCGCCTGGATGAATG
CGTAGTGCTCATGGAAAAaatctggaaggaggaaggggaggagggagggg
tgggaggggctgcgcccgcctcctcctcctcgggtggtgctcctccttgt
tcgCCTTCGTCCGATCCCTCCTTGATagaggATAGAGGGCTCAGGACTGA
AGGGCTTCGTCTCCAAGCCAATCGCTCTTACTTTCATCCAGCACCGGGTA
ACGCGTATGTTAGCTTGAGTATGTAAATGCTCAAGATCTGGTGCATGGCC
AACAACGGATCGGAACGCTTTCCTCCCAACGCGCGCCTGGTCTTTGTCCA
CGGGCATCGGATGGagggcccgagggagggggtgccggtgggggaggtcg
aggcaggggcggagtTCAACGTGGCGCTTCCCCTCACGACGCCCACGGTT
CCCGACCGTTACGTCGGTTACTGGCAGTTGGAAGCGCATGGGCCTCGCGG
GGAGCGGGTGGAGCTGGGGCATCGGATTTGGATtgacgtggtggtggagg
agaaagaggaggggtgggagttGGTGCGAGCGACacgagaggaggggggc
cagggagaaagggaggagggagcgagggcgatgggaggcgaagaaggaga
ggaaatgggggaggatgatggtgacgaggaggaaaaggttgAAGAtgacg
gggaagacgaaTCCCTGTTGGAgacggcagcggcagccaccctcgcttcc
tccttcccttcccctctcgcttcctccctcccgggctCGCAAGACTGGTC
AAAATGGACCCCTCAACTGGAGCTCTTGGCCGCCATGGGCTTCGAGACGC
GCCTGGATGAATGCGTAGTGCTCATGGAAAAaatctggaaggaggaaggg
gaggagggaggggtgggaggggctgcgcccgcctcctcctcctcgggtgg
tgctcctccttgttcgCCTTCGTCCGATCCCTCCTTGATagaggATAGAG
GGCTCAGGACTGAAGGGCTTCGTCTCCAAGCCAATCGCTCTTACTTTCAT
CCAGCACCGGGTAACGCGTATGTTAGCTTGAGTATGTAAATGCTCAAGAT
CTGGTGCATGGCCAACAACGGATCGGAACGCTTTCCTCCCAACGCGCGCC
TGGTCTTTGTCCACGGGCATCGGATGGagggcccgagggagggggtgccg
gtgggggaggtcgaggcaggggcggagtTCAACGTGGCGCTTCCCCTCAC
GACGCCCACGGTTCCCGACCGTTACGTCGGTTACTGGCAGTTGGAAGCGC
ATGGGCCTCGCGGGGAGCGGGTGGAGCTGGGGCATCGGATTTGGATtgac
gtggtggtggaggagaaagaggaggggtgggagttGGTGCGAGCGACacg
agaggaggggggccagggagaaagggaggagggagcgagggcgatgggag
gcgaagaaggagaggaaatgggggaggatgatggtgacgaggaggaaaag
gttgAAGAtgacggggaagacgaaTCCCTGTTGGAgacggcagcggcagc
caccctcgcttcctccttcccttcccctctcgcttcctccctcccgggct
CGCAAGACTGGTCAAAATGGACCCCTCAACTGGAGCTCTTGGCCGCCATG
GGCTTCGAGACGCGCCTGGATGAATGCGTAGTGCTCATGGAAAAaatctg
gaaggaggaaggggaggagggaggggtgggaggggctgcgcccgcctcct
cctcctcgggtggtgctcctccttgttcgCCTTCGTCCGATCCCTCCTTG
ATagaggATAGAGGGCTCAGGACTGAAGGGCTTCGTCTCCAAGCCAATCG
CTCTTACTTTCATCCAGCACCGGGTAACGCGTATGTTAGCTTGAGTATGT
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