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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100561g3.10218.mrna |
| Orig protein id | gnl|cribi|Naga_100561g3.10218 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:248472..250231 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7967 ID=rna7967|Name=rna7967|organism=Nannochloropsis gaditana|type=mRNA|length=3167bp
ATTGCGTCATGTCATGGTTTGCGTCCACCTGATCATTTTGTATGTTTTAT
AATTGTACGACAACAGGACTGGCGTCGACCACTGTCTTTAATAGTCTTTG
GTTTTATTGGTTATCTTTGGTATAAGATTCTTGGGTGAATCATTGGTCTA
TATTCTCAGGGAGAATAGTGGTTGTACTGAAGAATTAATTGGGTATTGGC
TTATCCACAGCGTTTTGATTTGTCTATTAGCATCAAGCATGTACCCATGG
AAGCATGTGTTGGTCATTTTCTCTATGGCCCTTCCCTCGTCTGTCATGCT
AGGCGAAGCCCCATATTTCCCGCTTCTTTCGCCTTTGTCTTGTCGCCATT
CCCCTGCAGCCTTATTCTCGTCCTGGATGACTCTGTCGAGGCGCTAGCCG
GTGTCTACGCACTATCATTCCTCTGCGTCATGGCTTTATTTACCATCGGC
AACATGCTTCTCAAGGTCCTTCAGTGTCCTCTCCCATATTTCTCCTTTTC
TCTGTGTTTCCTCGATCCCTCCTCCAGAACGCAAGTTTTCGAAACAATTG
GCTTTTCTTCCTCCCCTTCGCACCCGATACCCCTTCCGCTTCCCTATAGT
TCAAACGACCAAATTTTTGTCGTCCCTTTCTTTGCCCTTGGTGGAAGCTC
TTCTCGGGCTTTTTTGTGTAGGAGTCGGGTTCGTCGGGAACATGATGGAA
AAAGCCCGCGTACTTCCGTACTTCGTGGCCTAATATGCTGTGATCGTCAC
ACTGGTATGGATGCGAAAAGATTGGATCGACATTTTAGGGACAGAATGAA
AAAAATGCGTTTCCAAATTGCTTTTGACAATAATGCCTCGTGATGTTCCA
ACGCGAAAGCTCTTTTGTACGTGCGGGACAATGAGCAGACCTTCCGGGTT
TTGATTGTGCATTTCTCAATGCAGGAGGGAGAGGAAGGGAGGGAGGAAGG
AAAAGGCGAGAGGGATGCAGAGAAAAAAATACATGGCGGCCGTGAGAGTG
ATCGACAAGATCTAACCCAAGATAATGGTGAAGTGTCTGTATATCCAACG
GACTTTCTCCCCCAAAGCCCTGAGTCGACTTTCTTTCGAGACAGGCATTC
CGTCAAACCGATTATTCATGGCCTGTTCTCCAAAGATTGAGGACTTCCAC
GAATTTTCTGACGTTCGAATTGTGACGCATTGATGGGGTCACAAGAAAAA
AAGGACACGCAGGGCTAAGAGCAAATAGCTTCACATGCTTCGATTCAGAC
TTCGATTGACATATATCGCCATTTTCTAACGGCTCCTGCGCCCCGGTCCC
ATAACTTTATTGTTTCGGTTGCTTGCCCGCGGGCCAGAATATCCTTACGC
ATTATGCAAGAGCACTTTTTGTTCTGAAAACGAAGCATATAGTCTCGTTG
CGATGGTTTCCTCGTGGAGATTAGTCAGCGAACTTGGCGCGAGGCAATGC
TCGCTTCAGATCTTTTACTTAAAATGTTTCTCTCGCAATACTCTAGGTTT
TGTCATATTCACTGACTGCAGCAGCCATGCCGCTTTTTGTTTCCTCCCGC
TACTTGCTGTCGATCGCAACAGCTGCCCTCTGCTTGACATCCTCTTTTAG
CTTTGCGAAGATTGTAGTTGAAGATAATTTCATCGACGAGACTACACGCG
ACGCTCTCCTTGCGCAGCTTCCGTCTGAGATGCATCGTTTCAAACACACG
GTTGATTTACCTGGCAAGGTGTACAAGCGCCTCCTTTCCGTGTTGCATCC
TGAAAACTCCGAAGTATTTCCTTCCCAGCTCACTGCACCGGCCAAAGGAC
AGAAAGGTATGGTCGCCGCTCACAAAGATACATTCGAGGACAGTTCTCTG
GCAGACAGGCAGGTGGGCTTGGTGTACCTGGAAGGGGATGGCCGCATGCA
ATTGAAAAACGATGTGACCGGAGAGGAAACGATTATCGACGTCAAGCCTG
GCCGATTCCTGTCGTGGGATAACCGTCATTATACTCACCAGCTTCTTGCG
GGTAGCATGCCACGGCGCATTCTTGGTCCGATGGCTTTCCGTGACGGGGG
ATTTCAGTCTATTGGAGGAGGTGATCGCAACCGTTTTATCATCCAGGCCC
GCGCCCATCCCCTGTTCGCTCGGGCCGGCAAGACGGTGCGTGTGACTGCG
GATCTCGTAGTGTTGGATGACCAACCAGGACGTGAACGTGCTGTGCGGGC
ACTTCCGACCGCCGACATTGTATTTGCGTGCAGCCTTGATCCCTTCTTCA
ATTTCCAGTCCCTTACTGCGGGCAACAAGACCAGCAAGCATCGCAAGGAT
GGCACTGACGTCGGGATTTCTTTCTCCCGGTCCAAAATCGCTCCCAACAC
GTGGAGGCCTAAGATCACGTATGAGATCGTCGACGAAGGCGACACCCTGG
TGTGGACTCTCCCCAGCGACGGGACCAGGCTTCTCAAGAAGTATAAGATT
ACCATCATCATGCGAATTGGAAAGAACGTTCCTTCTGGCACCATGATTCC
CCTGTACTTGAGCGTGCCCTCTGAATGGGAGCAGGAGCTGGGCGTGGTGG
TCAAGTAAGTGCCTTGGGCTTTCTTACTCTAAGGGAGGAAAACTATTATG
TCATTTGGACAGTGATTTCGAGTGGTAACAAAGATAAAGGACAAAAGAAA
GAGAATTAAAAAAAGCAGCAAGCAACTCTCGAAAAGTATGAAGGGAAGAA
GATCTAGTAAGAAAGGGAGGGGAACACTTGCGATTCGACTGTAAGGGGAA
AGCTGTTGCAAACGTGCTTCATGGTCAGGATATCCGAGAAACGTCCAATA
CACCTTGCGGTCAAAATCATTCGGAGAGTCAGGAGACTGCGAAGAGAGAA
ATCATCGGAGTAGGAAGGTGCTTTGCGTGCCCATCTACCCTGGATAGCCT
CATGAATACAATGGCGCTGGCGTGTGTATTTATGACCAACTTATCACTTA
TTCAAAGGATCAATCACAAGCTATGAACTAGCCCTCTCGGCAGTAAGTAA
AGGCTGTACTTCGATGTGCGCAATATGCCTCTATTCAAGAAAGTCTTTCA
TGCTATTTCATTTCTCCTCCGACAACTCTTTCAAGATGAACGCCTTAGCC
TTTTCGCCCCTGTGCAACTTGATATTCTTCCCATACTTCTCGCTCCTGAC
GTTTTCATTCAGGAAGG back to topprotein sequence of rna7967 >rna7967-protein ID=rna7967-protein|Name=rna7967|organism=Nannochloropsis gaditana|type=polypeptide|length=252bp
MFEIRLNKILSTKGYLDPGDGGKRKKFSKIKSNKLSLAMGCVRVKLTYEG
RTFRRTVDPRSFTWAQFLAWGLVCFPSLAEPASLHLTYDDEDGDHPSLRG
EEDWREALCACERLDRPLRVTMTREEGGEVGREGGGLGPESLLSEGEETV
LVAAEGEVEEGREGPGEEGEGTTRGPGLTESQSTVPVFPALPPSPPDSAP
PSFPTITTSFLRALQAQLAQGREGGREGEGGERTVQAEERQTPAQARMLA
AL back to topmRNA from alignment at KK037247.1:248472..250231+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7967 ID=rna7967|Name=rna7967|organism=Nannochloropsis gaditana|type=mRNA|length=1760bp|location=Sequence derived from alignment at KK037247.1:248472..250231+ (Nannochloropsis gaditana)
TCCACGGGCGAGCTTCCATCGTGTCACCCGCCTCCAAAACCAGACAACCC
GCGACAAAACCACAATCTTGATATCAGCGTTCATGCGTCTCATGGCTTGT
GCGGGGTTGTAGATAGTCTTGTGCTGACGCGTCTTGTCGTTGTATGGTGT
CAAGGTGGTTTTAGAGGCTGGCACGTCCGCTTCAAGCAATGAATTCCTAG
CTACTGGAACATAAGGCTGTGTCTTTGGGCGCTGCCTCATGAATCGCACG
GGGGAGTTCTTTGAAAGACGTTCACACAGAGCCAGGAGCCTTCGATGTTT
ACCCTGATTGGGTCATTTCCGTGGTTGATGACTTGTCTAGGCGTAATTTA
TTTTGTTGTCACACAGCCCTTTTACTCTCACGATTCCCCGCCCCAGTGCA
ACCTAATAATCTTTCCCATACTTCTCGCTTCTGACATTCGTATTCACAAC
GTGGGGAGGACGTCATCTGATAGCGCAATTTGAGAATAGCGAGCTTTGCA
GGCGCTTTGTGGCCAGGGGTGGGTTTGGTGGCACATGTGCAGGATTTTAT
CGAATATGCGTCCTTCATTTTATGCTCCAGCATTGACCGAAGgagtgccc
ctcctccacataaAGTCTGCACTGTGCGTAGCATCACAGAAAGCAATTGC
TTCACTGTCATTATCAATTTAAAGCCGTGCATTGGCGTCGTAGAATTTGG
CAAATGCGTTGTCGTCCGCTTCTACTTTCGCCtcgtctcgtcctccccac
ttCGCTTCCCCTCACTCACGtatccttttctttccctctccccttcccga
tAAAACTCTCATGTTTGAGATTAGACTGAACAAGATCTTATCAACAAAAG
GTTACCTCGATCCAGGTGACGGTGGGAAACGCAAGAAGTTCTCAAAAATC
AAGAGCAACAAGCTGTCCCTAGCCATGGGGTGCGTGCGCGTCAAACTCAC
CTATGAGGGTCGCACCTTCAGACGCACCGTGGACCCTCGGTCCTTTACGT
GGGCGCAATTTCTGGCCTGGTAAGATAGAAATAAGAAAGTGAAGGGGATG
CGTGTACGCgtgagagagcgagggagggggacggaaaAGGGGATGGGCAG
AGCCTGGCGCATAGATGGATGCCCGTGATATGTCGATACACCTCCAATCC
TCCTTCCAatctcatccctccccctctccacccctctcctcgaccTGTCC
ACACCTGTTTCAGGGGCCTCGTGTGCTTCCCGTCCCTCGCGgagcccgcc
tccctccacttgaCGTACGATGACGAGGATGGGGACCACCCCTCcttgag
gggggaggaggattggCGCGAAGCCCTGTGTGCGTGCGAGCGGCTCGACC
GTCCCTTGCGCGTGACgatgacgagggaggaagggggggaggtagggagg
gagggaggcggcttGGGCCCTGAGTCCTTGctgagcgagggagaggagac
cgTGCTGGTCGCggccgagggcgaggtcgaggaagggagggaggggccgg
gggaggagggggaaggcacaACCCGAGGCCCCGGATTGACCGAGAGCCAG
AGCACGGTCCCTGTTTTCCccgcacttcctccctcgcccccggactccgc
ccctccctccttccccaccatcACCACGAGCTTCCTGCGGGCCCTTCAAG
CGCAACtggcgcaagggagggagggagggagggagggagaggggggagaa
agaacggtgcaggcggaggagaggcagacgCCTGCTCAAGCGAGGATGCT
CGCGGCCTTG back to topCoding sequence (CDS) from alignment at KK037247.1:248472..250231+ >rna7967 ID=rna7967|Name=rna7967|organism=Nannochloropsis gaditana|type=CDS|length=1512bp|location=Sequence derived from alignment at KK037247.1:248472..250231+ (Nannochloropsis gaditana)
ATGTTTGAGATTAGACTGAACAAGATCTTATCAACAAAAGGTTACCTCGA
TCCAGGTGACGGTGGGAAACGCAAGAAGTTCTCAAAAATCAAGAGCAACA
AGCTGTCCCTAGCCATGGGGTGCGTGCGCGTCAAACTCACCTATGAGGGT
CGCACCTTCAGACGCACCGTGGACCCTCGGTCCTTTACGTGGGCGCAATT
TCTGGCCTGGGGCCTCGTGTGCTTCCCGTCCCTCGCGgagcccgcctccc
tccacttgaCGTACGATGACGAGGATGGGGACCACCCCTCcttgaggggg
gaggaggattggCGCGAAGCCCTGTGTGCGTGCGAGCGGCTCGACCGTCC
CTTGCGCGTGACgatgacgagggaggaagggggggaggtagggagggagg
gaggcggcttGGGCCCTGAGTCCTTGctgagcgagggagaggagaccgTG
CTGGTCGCggccgagggcgaggtcgaggaagggagggaggggccggggga
ggagggggaaggcacaACCCGAGGCCCCGGATTGACCGAGAGCCAGAGCA
CGGTCCCTGTTTTCCccgcacttcctccctcgcccccggactccgcccct
ccctccttccccaccatcACCACGAGCTTCCTGCGGGCCCTTCAAGCGCA
ACtggcgcaagggagggagggagggagggagggagaggggggagaaagaa
cggtgcaggcggaggagaggcagacgCCTGCTCAAGCGAGGATGCTCGCG
GCCTTGATGTTTGAGATTAGACTGAACAAGATCTTATCAACAAAAGGTTA
CCTCGATCCAGGTGACGGTGGGAAACGCAAGAAGTTCTCAAAAATCAAGA
GCAACAAGCTGTCCCTAGCCATGGGGTGCGTGCGCGTCAAACTCACCTAT
GAGGGTCGCACCTTCAGACGCACCGTGGACCCTCGGTCCTTTACGTGGGC
GCAATTTCTGGCCTGGGGCCTCGTGTGCTTCCCGTCCCTCGCGgagcccg
cctccctccacttgaCGTACGATGACGAGGATGGGGACCACCCCTCcttg
aggggggaggaggattggCGCGAAGCCCTGTGTGCGTGCGAGCGGCTCGA
CCGTCCCTTGCGCGTGACgatgacgagggaggaagggggggaggtaggga
gggagggaggcggcttGGGCCCTGAGTCCTTGctgagcgagggagaggag
accgTGCTGGTCGCggccgagggcgaggtcgaggaagggagggaggggcc
gggggaggagggggaaggcacaACCCGAGGCCCCGGATTGACCGAGAGCC
AGAGCACGGTCCCTGTTTTCCccgcacttcctccctcgcccccggactcc
gcccctccctccttccccaccatcACCACGAGCTTCCTGCGGGCCCTTCA
AGCGCAACtggcgcaagggagggagggagggagggagggagaggggggag
aaagaacggtgcaggcggaggagaggcagacgCCTGCTCAAGCGAGGATG
CTCGCGGCCTTG back to top
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